Gene annotation
Transcriptome id Sobic.001G018400.1
Synonym Sb01g001800
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WT21
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13950 : -
RAP-DB (Rice) LOC_Os01g15060.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G052500 - -
2 Sobic.008G183300 thaumatin, putative, expressed -
3 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
5 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.005G171100 - -
7 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
9 Sobic.010G273600 CHIT8 - Chitinase family protein precursor, expressed K01183: chitinase
10 Sobic.010G045000 VQ domain containing protein, putative -
11 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
12 Sobic.001G291600 - -
13 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
14 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
15 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
16 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
17 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
18 Sobic.006G113400 heavy metal associated domain containing protein, expressed -
19 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
20 Sobic.006G246200 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G018400 Sobic001G018400 Sobic004G052500 Sobic004G052500 Sobic001G018400--Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic001G018400--Sobic008G183300 Sobic001G146500 Sobic001G146500 Sobic001G018400--Sobic001G146500 Sobic003G291700 Sobic003G291700 Sobic001G018400--Sobic003G291700 Sobic003G031100 Sobic003G031100 Sobic001G018400--Sobic003G031100 Sobic005G171100 Sobic005G171100 Sobic001G018400--Sobic005G171100 Sobic005G082700 Sobic005G082700 Sobic001G018400--Sobic005G082700 Sobic006G113900 Sobic006G113900 Sobic001G018400--Sobic006G113900 Sobic010G273600 Sobic010G273600 Sobic001G018400--Sobic010G273600 Sobic004G052500--Sobic008G183300 Sobic001G259500 Sobic001G259500 Sobic004G052500--Sobic001G259500 Sobic004G052500--Sobic001G018400 Sobic004G052500--Sobic005G082700 Sobic004G052500--Sobic001G146500 Sobic008G183300--Sobic004G052500 Sobic008G183300--Sobic001G259500 Sobic008G183300--Sobic005G082700 Sobic006G113400 Sobic006G113400 Sobic008G183300--Sobic006G113400 Sobic006G246200 Sobic006G246200 Sobic008G183300--Sobic006G246200 Sobic001G146500--Sobic001G259500 Sobic010G018300 Sobic010G018300 Sobic001G146500--Sobic010G018300 Sobic002G241250 Sobic002G241250 Sobic001G146500--Sobic002G241250 Sobic001G146500--Sobic004G052500 Sobic001G146400 Sobic001G146400 Sobic001G146500--Sobic001G146400 Sobic010G045000 Sobic010G045000 Sobic003G291700--Sobic010G045000 Sobic008G060300 Sobic008G060300 Sobic003G291700--Sobic008G060300 Sobic003G291700--Sobic006G113900 Sobic003G291700--Sobic005G082700 Sobic001G381300 Sobic001G381300 Sobic003G291700--Sobic001G381300 Sobic005G193600 Sobic005G193600 Sobic003G291700--Sobic005G193600 Sobic003G258700 Sobic003G258700 Sobic003G291700--Sobic003G258700 Sobic006G229500 Sobic006G229500 Sobic003G291700--Sobic006G229500 Sobic003G376200 Sobic003G376200 Sobic003G291700--Sobic003G376200 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic009G073500 Sobic009G073500 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic005G171100--Sobic008G146700 Sobic005G171100--Sobic010G045000 Sobic005G171100--Sobic003G291700 Sobic005G171100--Sobic006G246200 Sobic006G231600 Sobic006G231600 Sobic005G171100--Sobic006G231600 Sobic002G209100 Sobic002G209100 Sobic005G171100--Sobic002G209100 Sobic005G171100--Sobic005G082700 Sobic005G171100--Sobic006G113900 Sobic001G136300 Sobic001G136300 Sobic005G171100--Sobic001G136300 Sobic009G241500 Sobic009G241500 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic008G181801 Sobic008G181801 Sobic005G082700--Sobic008G181801 Sobic005G082700--Sobic001G136300 Sobic005G226100 Sobic005G226100 Sobic005G082700--Sobic005G226100 Sobic005G133166 Sobic005G133166 Sobic005G082700--Sobic005G133166 Sobic005G082700--Sobic004G052500 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic006G113900--Sobic001G136300 Sobic006G113900--Sobic006G246200 Sobic006G113900--Sobic001G146500 Sobic006G113900--Sobic008G183300 Sobic006G113900--Sobic003G291700 Sobic006G113900--Sobic005G082700 Sobic006G168000 Sobic006G168000 Sobic006G113900--Sobic006G168000 Sobic006G113900--Sobic009G241500 Sobic006G003700 Sobic006G003700 Sobic006G113900--Sobic006G003700 Sobic010G273600--Sobic004G052500 Sobic002G425300 Sobic002G425300 Sobic010G273600--Sobic002G425300 Sobic010G273600--Sobic008G183300 Sobic010G273600--Sobic001G259500 Sobic010G273600--Sobic001G146500
Octagon: transcription factors


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