Gene annotation
Transcriptome id Sobic.008G146700.1
Synonym PR2, Sb08g019670, PR-2, BG2, BGL2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
"beta-1,3-glucanase " (PubMedID : 25311645)
glycosyl hydrolases family 17, putative, expressed
UniProt C5YQU5
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF94
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G57260 : beta-1,3-glucanase 2
RAP-DB (Rice) LOC_Os01g71410.1 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a034730 , Zm00025a052795
Brachypodium KQK11472 , KQK11473 , KQK08651 , KQK11471 , KQK11504
Barley HORVU3Hr1G111160.3 , HORVU3Hr1G111160.2 , HORVU3Hr1G111160.1 , HORVU3Hr1G111160.7 , HORVU3Hr1G111160.5 , HORVU3Hr1G111160.4 , HORVU3Hr1G111160.8 , HORVU3Hr1G111160.11 , HORVU3Hr1G105600.1
Wheat TraesCS3D02G478800 , TraesCS3B02G571300 , TraesCS3D02G512300 , TraesCS3B02G530500 , TraesCS3D02G475000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G084300 glycosyl hydrolase, putative, expressed -
2 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
3 Sobic.005G171100 - -
4 Sobic.002G327900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.008G182900 thaumatin, putative, expressed -
6 Sobic.010G240400 beta-expansin precursor, putative, expressed -
7 Sobic.002G327700 TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.001G291600 - -
11 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G261600 cellulase, putative, expressed -
13 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
14 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.007G070400 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
16 Sobic.010G155300 VQ domain containing protein, putative, expressed -
17 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.010G045000 VQ domain containing protein, putative -
19 Sobic.003G421700 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.003G049500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic008G146700 Sobic008G146700 Sobic005G084300 Sobic005G084300 Sobic008G146700--Sobic005G084300 Sobic004G258300 Sobic004G258300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic002G327900 Sobic002G327900 Sobic008G146700--Sobic002G327900 Sobic008G182900 Sobic008G182900 Sobic008G146700--Sobic008G182900 Sobic010G240400 Sobic010G240400 Sobic008G146700--Sobic010G240400 Sobic002G327700 Sobic002G327700 Sobic008G146700--Sobic002G327700 Sobic002G327800 Sobic002G327800 Sobic008G146700--Sobic002G327800 Sobic009G073500 Sobic009G073500 Sobic008G146700--Sobic009G073500 Sobic005G084300--Sobic008G146700 Sobic005G084300--Sobic009G073500 Sobic005G084300--Sobic010G240400 Sobic005G084300--Sobic002G327900 Sobic005G169200 Sobic005G169200 Sobic005G084300--Sobic005G169200 Sobic005G084300--Sobic002G327800 Sobic005G084300--Sobic004G258300 Sobic005G084300--Sobic002G327700 Sobic005G084300--Sobic008G182900 Sobic004G258300--Sobic002G327700 Sobic004G258300--Sobic002G327900 Sobic004G258300--Sobic002G327800 Sobic004G258300--Sobic008G146700 Sobic004G258300--Sobic008G182900 Sobic010G128000 Sobic010G128000 Sobic004G258300--Sobic010G128000 Sobic002G195200 Sobic002G195200 Sobic004G258300--Sobic002G195200 Sobic007G058800 Sobic007G058800 Sobic004G258300--Sobic007G058800 Sobic004G258300--Sobic005G084300 Sobic005G171100--Sobic008G146700 Sobic010G045000 Sobic010G045000 Sobic005G171100--Sobic010G045000 Sobic003G291700 Sobic003G291700 Sobic005G171100--Sobic003G291700 Sobic006G246200 Sobic006G246200 Sobic005G171100--Sobic006G246200 Sobic006G231600 Sobic006G231600 Sobic005G171100--Sobic006G231600 Sobic002G209100 Sobic002G209100 Sobic005G171100--Sobic002G209100 Sobic005G082700 Sobic005G082700 Sobic005G171100--Sobic005G082700 Sobic006G113900 Sobic006G113900 Sobic005G171100--Sobic006G113900 Sobic001G136300 Sobic001G136300 Sobic005G171100--Sobic001G136300 Sobic002G327900--Sobic004G258300 Sobic002G327900--Sobic002G327700 Sobic002G327900--Sobic002G327800 Sobic002G327900--Sobic010G128000 Sobic002G327900--Sobic008G146700 Sobic007G070400 Sobic007G070400 Sobic002G327900--Sobic007G070400 Sobic002G327900--Sobic005G084300 Sobic002G327900--Sobic008G182900 Sobic001G184100 Sobic001G184100 Sobic002G327900--Sobic001G184100 Sobic008G182900--Sobic008G146700 Sobic008G182900--Sobic002G327800 Sobic008G182900--Sobic004G258300 Sobic008G182900--Sobic002G327700 Sobic008G182900--Sobic002G327900 Sobic008G182900--Sobic005G171100 Sobic008G182900--Sobic005G084300 Sobic008G182900--Sobic002G209100 Sobic005G063900 Sobic005G063900 Sobic008G182900--Sobic005G063900 Sobic010G240400--Sobic009G073500 Sobic010G231000 Sobic010G231000 Sobic010G240400--Sobic010G231000 Sobic005G126100 Sobic005G126100 Sobic010G240400--Sobic005G126100 Sobic010G240400--Sobic005G084300 Sobic010G240400--Sobic008G146700 Sobic010G172800 Sobic010G172800 Sobic010G240400--Sobic010G172800 Sobic007G059100 Sobic007G059100 Sobic010G240400--Sobic007G059100 Sobic001G291600 Sobic001G291600 Sobic010G240400--Sobic001G291600 Sobic008G182400 Sobic008G182400 Sobic010G240400--Sobic008G182400 Sobic002G327700--Sobic004G258300 Sobic002G327700--Sobic002G327800 Sobic002G327700--Sobic002G327900 Sobic002G327700--Sobic008G146700 Sobic002G327700--Sobic007G058800 Sobic002G327700--Sobic007G059100 Sobic002G327700--Sobic002G195200 Sobic002G327700--Sobic001G184100 Sobic002G327700--Sobic008G182900 Sobic002G327800--Sobic002G327700 Sobic002G327800--Sobic004G258300 Sobic002G327800--Sobic002G327900 Sobic002G327800--Sobic010G128000 Sobic002G327800--Sobic008G182900 Sobic005G055900 Sobic005G055900 Sobic002G327800--Sobic005G055900 Sobic004G144700 Sobic004G144700 Sobic002G327800--Sobic004G144700 Sobic002G327800--Sobic008G146700 Sobic002G327800--Sobic005G084300 Sobic008G182800 Sobic008G182800 Sobic009G073500--Sobic008G182800 Sobic009G073500--Sobic010G240400 Sobic009G073500--Sobic001G291600 Sobic009G073500--Sobic005G169200 Sobic001G099400 Sobic001G099400 Sobic009G073500--Sobic001G099400 Sobic009G073500--Sobic010G231000 Sobic002G065800 Sobic002G065800 Sobic009G073500--Sobic002G065800 Sobic009G073500--Sobic008G182400 Sobic009G073500--Sobic005G084300
Octagon: transcription factors


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