Gene annotation
Transcriptome id Sobic.007G070400.1
Synonym Sb07g005570
Functional annotation 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed
UniProt A0A1B6PG49
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF175
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G06650 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os03g48430.1 : 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed
MaizeGDB (Corn) Zm00025a054825
Brachypodium KQJ95259 , KQK08219 , KQK21761
Barley HORVU3Hr1G093370.1 , HORVU4Hr1G089410.1 , HORVU5Hr1G125410.2 , HORVU5Hr1G125410.1 , HORVU1Hr1G018600.5 , HORVU1Hr1G018600.1 , HORVU1Hr1G018600.2 , HORVU2Hr1G005670.1 , HORVU4Hr1G000490.1 , HORVU7Hr1G118760.2 , HORVU7Hr1G118760.1
Wheat TraesCS1A02G025800 , TraesCS2B02G076400 , TraesCS7A02G222900 , TraesCS2D02G036900 , TraesCS5A02G557100 , TraesCSU02G030400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G327900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
2 Sobic.002G327700 TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.010G240400 beta-expansin precursor, putative, expressed -
4 Sobic.005G126100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
5 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
6 Sobic.005G084300 glycosyl hydrolase, putative, expressed -
7 Sobic.001G291600 - -
8 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
9 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.008G151000 wall-associated receptor kinase 3 precursor, putative, expressed -
13 Sobic.008G104801 - -
14 Sobic.007G059100 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
15 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.005G084000 expressed protein -
17 Sobic.007G058800 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
18 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
19 Sobic.005G218400 NB-ARC domain containing protein, expressed -
20 Sobic.005G145950 - -


Gene co-expression network
sample Sobic007G070400 Sobic007G070400 Sobic002G327900 Sobic002G327900 Sobic007G070400--Sobic002G327900 Sobic002G327700 Sobic002G327700 Sobic007G070400--Sobic002G327700 Sobic010G240400 Sobic010G240400 Sobic007G070400--Sobic010G240400 Sobic005G126100 Sobic005G126100 Sobic007G070400--Sobic005G126100 Sobic004G258300 Sobic004G258300 Sobic007G070400--Sobic004G258300 Sobic005G084300 Sobic005G084300 Sobic007G070400--Sobic005G084300 Sobic001G291600 Sobic001G291600 Sobic007G070400--Sobic001G291600 Sobic008G146700 Sobic008G146700 Sobic007G070400--Sobic008G146700 Sobic010G172800 Sobic010G172800 Sobic007G070400--Sobic010G172800 Sobic002G327900--Sobic004G258300 Sobic002G327900--Sobic002G327700 Sobic002G327800 Sobic002G327800 Sobic002G327900--Sobic002G327800 Sobic010G128000 Sobic010G128000 Sobic002G327900--Sobic010G128000 Sobic002G327900--Sobic008G146700 Sobic002G327900--Sobic007G070400 Sobic002G327900--Sobic005G084300 Sobic008G182900 Sobic008G182900 Sobic002G327900--Sobic008G182900 Sobic001G184100 Sobic001G184100 Sobic002G327900--Sobic001G184100 Sobic002G327700--Sobic004G258300 Sobic002G327700--Sobic002G327800 Sobic002G327700--Sobic002G327900 Sobic002G327700--Sobic008G146700 Sobic007G058800 Sobic007G058800 Sobic002G327700--Sobic007G058800 Sobic007G059100 Sobic007G059100 Sobic002G327700--Sobic007G059100 Sobic002G195200 Sobic002G195200 Sobic002G327700--Sobic002G195200 Sobic002G327700--Sobic001G184100 Sobic002G327700--Sobic008G182900 Sobic009G073500 Sobic009G073500 Sobic010G240400--Sobic009G073500 Sobic010G231000 Sobic010G231000 Sobic010G240400--Sobic010G231000 Sobic010G240400--Sobic005G126100 Sobic010G240400--Sobic005G084300 Sobic010G240400--Sobic008G146700 Sobic010G240400--Sobic010G172800 Sobic010G240400--Sobic007G059100 Sobic010G240400--Sobic001G291600 Sobic008G182400 Sobic008G182400 Sobic010G240400--Sobic008G182400 Sobic002G065500 Sobic002G065500 Sobic005G126100--Sobic002G065500 Sobic005G126100--Sobic010G172800 Sobic002G065800 Sobic002G065800 Sobic005G126100--Sobic002G065800 Sobic005G126100--Sobic008G182400 Sobic005G126100--Sobic010G231000 Sobic002G065600 Sobic002G065600 Sobic005G126100--Sobic002G065600 Sobic001G099400 Sobic001G099400 Sobic005G126100--Sobic001G099400 Sobic004G197100 Sobic004G197100 Sobic005G126100--Sobic004G197100 Sobic002G065700 Sobic002G065700 Sobic005G126100--Sobic002G065700 Sobic004G258300--Sobic002G327700 Sobic004G258300--Sobic002G327900 Sobic004G258300--Sobic002G327800 Sobic004G258300--Sobic008G146700 Sobic004G258300--Sobic008G182900 Sobic004G258300--Sobic010G128000 Sobic004G258300--Sobic002G195200 Sobic004G258300--Sobic007G058800 Sobic004G258300--Sobic005G084300 Sobic005G084300--Sobic008G146700 Sobic005G084300--Sobic009G073500 Sobic005G084300--Sobic010G240400 Sobic005G084300--Sobic002G327900 Sobic005G169200 Sobic005G169200 Sobic005G084300--Sobic005G169200 Sobic005G084300--Sobic002G327800 Sobic005G084300--Sobic004G258300 Sobic005G084300--Sobic002G327700 Sobic005G084300--Sobic008G182900 Sobic001G291600--Sobic009G073500 Sobic005G145950 Sobic005G145950 Sobic001G291600--Sobic005G145950 Sobic001G291600--Sobic001G099400 Sobic001G291600--Sobic002G065800 Sobic001G291600--Sobic010G240400 Sobic001G291600--Sobic010G172800 Sobic001G291600--Sobic005G126100 Sobic001G291600--Sobic008G146700 Sobic001G311866 Sobic001G311866 Sobic001G291600--Sobic001G311866 Sobic008G146700--Sobic005G084300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic008G146700--Sobic010G240400 Sobic008G146700--Sobic002G327700 Sobic008G146700--Sobic002G327800 Sobic008G146700--Sobic009G073500 Sobic010G172800--Sobic005G126100 Sobic010G172800--Sobic002G065500 Sobic010G172800--Sobic008G182400 Sobic010G172800--Sobic002G065600 Sobic010G172800--Sobic010G231000 Sobic010G172800--Sobic001G099400 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic006G117400 Sobic006G117400 Sobic010G172800--Sobic006G117400
Octagon: transcription factors


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