Gene annotation
Transcriptome id Sobic.010G231000.2
Synonym Sb10g027360
Functional annotation Protein O-methyltransferase ZRP4 (Zm) (PubMedID : 27208977)
O-methyltransferase, putative, expressed
UniProt A0A1W0VUF2
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF86
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35150 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os05g43940.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a032822 , Zm00025a044225
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G065700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.005G126100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.002G065600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
4 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
5 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
6 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.008G182400 thaumatin, putative, expressed -
8 Sobic.006G117400 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
9 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.004G197100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
12 Sobic.008G182800 thaumatin, putative, expressed -
13 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
15 Sobic.010G240400 beta-expansin precursor, putative, expressed -
16 Sobic.005G169200 WIP3 - Wound-induced protein precursor, expressed -
17 Sobic.003G035801 - -
18 Sobic.007G077832 - -
19 Sobic.009G181200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.007G059100 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase


Gene co-expression network
sample Sobic010G231000 Sobic010G231000 Sobic002G065700 Sobic002G065700 Sobic010G231000--Sobic002G065700 Sobic005G126100 Sobic005G126100 Sobic010G231000--Sobic005G126100 Sobic002G065600 Sobic002G065600 Sobic010G231000--Sobic002G065600 Sobic010G230800 Sobic010G230800 Sobic010G231000--Sobic010G230800 Sobic002G065500 Sobic002G065500 Sobic010G231000--Sobic002G065500 Sobic010G172800 Sobic010G172800 Sobic010G231000--Sobic010G172800 Sobic008G182400 Sobic008G182400 Sobic010G231000--Sobic008G182400 Sobic006G117400 Sobic006G117400 Sobic010G231000--Sobic006G117400 Sobic010G230900 Sobic010G230900 Sobic010G231000--Sobic010G230900 Sobic002G065700--Sobic010G231000 Sobic002G065700--Sobic002G065600 Sobic002G065700--Sobic002G065500 Sobic002G065700--Sobic010G230800 Sobic004G197100 Sobic004G197100 Sobic002G065700--Sobic004G197100 Sobic002G065700--Sobic006G117400 Sobic002G065700--Sobic008G182400 Sobic002G065700--Sobic010G230900 Sobic002G065700--Sobic005G126100 Sobic005G126100--Sobic002G065500 Sobic005G126100--Sobic010G172800 Sobic002G065800 Sobic002G065800 Sobic005G126100--Sobic002G065800 Sobic005G126100--Sobic008G182400 Sobic005G126100--Sobic010G231000 Sobic005G126100--Sobic002G065600 Sobic001G099400 Sobic001G099400 Sobic005G126100--Sobic001G099400 Sobic005G126100--Sobic004G197100 Sobic005G126100--Sobic002G065700 Sobic002G065600--Sobic002G065500 Sobic002G065600--Sobic008G182400 Sobic002G065600--Sobic002G065800 Sobic002G065600--Sobic002G065700 Sobic002G065600--Sobic005G126100 Sobic002G065600--Sobic004G197100 Sobic002G065600--Sobic010G231000 Sobic002G065600--Sobic010G172800 Sobic002G065600--Sobic006G117400 Sobic010G230800--Sobic010G230900 Sobic010G230800--Sobic010G231000 Sobic010G230800--Sobic002G065700 Sobic005G169200 Sobic005G169200 Sobic010G230800--Sobic005G169200 Sobic008G182800 Sobic008G182800 Sobic010G230800--Sobic008G182800 Sobic001G145700 Sobic001G145700 Sobic010G230800--Sobic001G145700 Sobic009G073500 Sobic009G073500 Sobic010G230800--Sobic009G073500 Sobic009G181200 Sobic009G181200 Sobic010G230800--Sobic009G181200 Sobic010G230800--Sobic002G065600 Sobic002G065500--Sobic002G065600 Sobic002G065500--Sobic008G182400 Sobic002G065500--Sobic002G065800 Sobic002G065500--Sobic005G126100 Sobic002G065500--Sobic004G197100 Sobic002G065500--Sobic001G099400 Sobic002G065500--Sobic002G065700 Sobic002G065500--Sobic010G172800 Sobic002G065500--Sobic010G231000 Sobic010G172800--Sobic005G126100 Sobic010G172800--Sobic002G065500 Sobic010G172800--Sobic008G182400 Sobic010G172800--Sobic002G065600 Sobic010G172800--Sobic010G231000 Sobic010G172800--Sobic001G099400 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic010G172800--Sobic006G117400 Sobic008G182400--Sobic002G065500 Sobic008G182400--Sobic002G065800 Sobic008G182400--Sobic002G065600 Sobic008G182400--Sobic005G126100 Sobic008G182400--Sobic001G099400 Sobic008G182400--Sobic010G172800 Sobic008G182400--Sobic004G197100 Sobic008G182400--Sobic010G231000 Sobic008G182400--Sobic006G117400 Sobic006G117400--Sobic002G065500 Sobic006G117400--Sobic002G065600 Sobic006G117400--Sobic008G182400 Sobic006G117400--Sobic002G065700 Sobic006G117400--Sobic001G099400 Sobic006G117400--Sobic010G172800 Sobic006G117400--Sobic008G182800 Sobic006G117400--Sobic010G231000 Sobic006G117400--Sobic002G065800 Sobic010G230900--Sobic010G230800 Sobic010G230900--Sobic002G065700 Sobic010G230900--Sobic010G231000 Sobic010G230900--Sobic005G169200 Sobic010G230900--Sobic001G145700 Sobic010G230900--Sobic008G182800 Sobic010G230900--Sobic009G181200 Sobic002G024400 Sobic002G024400 Sobic010G230900--Sobic002G024400 Sobic010G230900--Sobic009G073500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.