Gene annotation
Transcriptome id Sobic.007G059100.1
Synonym OMT1, ATOMT1, Sb07g004710
Functional annotation O-methyltransferase, putative, expressed
UniProt A0A1B6PFV1
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF63
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology K13066; E2.1.1.68, caffeic acid 3-O-methyltransferase
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G54160 : O-methyltransferase 1
RAP-DB (Rice) LOC_Os04g01470.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G058800 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
2 Sobic.002G023000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK83 - OsWAK pseudogene, expressed -
3 Sobic.010G240400 beta-expansin precursor, putative, expressed -
4 Sobic.002G327700 TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.002G195200 - -
6 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
7 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
8 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
9 Sobic.005G126100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
10 Sobic.004G094600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.007G214300 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.002G195100 - -
14 Sobic.002G327900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.001G291600 - -
16 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
19 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.007G070400 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -


Gene co-expression network
sample Sobic007G059100 Sobic007G059100 Sobic007G058800 Sobic007G058800 Sobic007G059100--Sobic007G058800 Sobic002G023000 Sobic002G023000 Sobic007G059100--Sobic002G023000 Sobic010G240400 Sobic010G240400 Sobic007G059100--Sobic010G240400 Sobic002G327700 Sobic002G327700 Sobic007G059100--Sobic002G327700 Sobic002G195200 Sobic002G195200 Sobic007G059100--Sobic002G195200 Sobic007G058900 Sobic007G058900 Sobic007G059100--Sobic007G058900 Sobic010G231000 Sobic010G231000 Sobic007G059100--Sobic010G231000 Sobic004G258300 Sobic004G258300 Sobic007G059100--Sobic004G258300 Sobic005G126100 Sobic005G126100 Sobic007G059100--Sobic005G126100 Sobic007G058800--Sobic007G059100 Sobic007G058800--Sobic002G023000 Sobic007G058800--Sobic002G195200 Sobic002G195100 Sobic002G195100 Sobic007G058800--Sobic002G195100 Sobic007G058800--Sobic002G327700 Sobic007G214300 Sobic007G214300 Sobic007G058800--Sobic007G214300 Sobic007G058800--Sobic004G258300 Sobic007G058800--Sobic007G058900 Sobic007G058800--Sobic010G240400 Sobic002G023000--Sobic007G058800 Sobic002G023000--Sobic007G059100 Sobic002G023000--Sobic002G195100 Sobic002G023000--Sobic002G195200 Sobic002G023000--Sobic007G214300 Sobic007G215700 Sobic007G215700 Sobic002G023000--Sobic007G215700 Sobic002G023000--Sobic007G058900 Sobic002G023000--Sobic004G258300 Sobic002G023000--Sobic002G327700 Sobic009G073500 Sobic009G073500 Sobic010G240400--Sobic009G073500 Sobic010G240400--Sobic010G231000 Sobic010G240400--Sobic005G126100 Sobic005G084300 Sobic005G084300 Sobic010G240400--Sobic005G084300 Sobic008G146700 Sobic008G146700 Sobic010G240400--Sobic008G146700 Sobic010G172800 Sobic010G172800 Sobic010G240400--Sobic010G172800 Sobic010G240400--Sobic007G059100 Sobic001G291600 Sobic001G291600 Sobic010G240400--Sobic001G291600 Sobic008G182400 Sobic008G182400 Sobic010G240400--Sobic008G182400 Sobic002G327700--Sobic004G258300 Sobic002G327800 Sobic002G327800 Sobic002G327700--Sobic002G327800 Sobic002G327900 Sobic002G327900 Sobic002G327700--Sobic002G327900 Sobic002G327700--Sobic008G146700 Sobic002G327700--Sobic007G058800 Sobic002G327700--Sobic007G059100 Sobic002G327700--Sobic002G195200 Sobic001G184100 Sobic001G184100 Sobic002G327700--Sobic001G184100 Sobic008G182900 Sobic008G182900 Sobic002G327700--Sobic008G182900 Sobic002G195200--Sobic002G195100 Sobic004G245300 Sobic004G245300 Sobic002G195200--Sobic004G245300 Sobic002G195200--Sobic007G214300 Sobic002G195300 Sobic002G195300 Sobic002G195200--Sobic002G195300 Sobic002G195200--Sobic007G058800 Sobic002G195200--Sobic002G023000 Sobic005G065500 Sobic005G065500 Sobic002G195200--Sobic005G065500 Sobic004G094600 Sobic004G094600 Sobic002G195200--Sobic004G094600 Sobic002G195200--Sobic007G215700 Sobic007G058900--Sobic007G059100 Sobic007G058900--Sobic007G215700 Sobic007G058900--Sobic010G240400 Sobic003G031100 Sobic003G031100 Sobic007G058900--Sobic003G031100 Sobic007G058900--Sobic002G023000 Sobic007G058900--Sobic007G058800 Sobic007G058900--Sobic001G291600 Sobic007G058900--Sobic009G073500 Sobic007G058900--Sobic008G146700 Sobic002G065700 Sobic002G065700 Sobic010G231000--Sobic002G065700 Sobic010G231000--Sobic005G126100 Sobic002G065600 Sobic002G065600 Sobic010G231000--Sobic002G065600 Sobic010G230800 Sobic010G230800 Sobic010G231000--Sobic010G230800 Sobic002G065500 Sobic002G065500 Sobic010G231000--Sobic002G065500 Sobic010G231000--Sobic010G172800 Sobic010G231000--Sobic008G182400 Sobic006G117400 Sobic006G117400 Sobic010G231000--Sobic006G117400 Sobic010G230900 Sobic010G230900 Sobic010G231000--Sobic010G230900 Sobic004G258300--Sobic002G327700 Sobic004G258300--Sobic002G327900 Sobic004G258300--Sobic002G327800 Sobic004G258300--Sobic008G146700 Sobic004G258300--Sobic008G182900 Sobic010G128000 Sobic010G128000 Sobic004G258300--Sobic010G128000 Sobic004G258300--Sobic002G195200 Sobic004G258300--Sobic007G058800 Sobic004G258300--Sobic005G084300 Sobic005G126100--Sobic002G065500 Sobic005G126100--Sobic010G172800 Sobic002G065800 Sobic002G065800 Sobic005G126100--Sobic002G065800 Sobic005G126100--Sobic008G182400 Sobic005G126100--Sobic010G231000 Sobic005G126100--Sobic002G065600 Sobic001G099400 Sobic001G099400 Sobic005G126100--Sobic001G099400 Sobic004G197100 Sobic004G197100 Sobic005G126100--Sobic004G197100 Sobic005G126100--Sobic002G065700
Octagon: transcription factors


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