Gene annotation
Transcriptome id Sobic.007G058900.1
Synonym SbSTS1, TT4, SbCHS8 , Stilbene Synthase Gene, Sb07g004700, SbSTS1;chalcone synthase 8, SbCHS8, ATCHS, CHS, SbSTS1 ;stilbene synthase
Functional annotation "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins." (PubMedID : 15821144)
Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants. (PubMedID : 18023075)
"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum" (PubMedID : 15821144)
chalcone synthase, putative, expressed
UniProt Q8VWQ7
Pfam PF00195
Panther DB PTHR11877 PTHR11877:SF27
NCBI CDD -
KEGG Orthology K00660; chalcone synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os11g32650.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G005220.3 , HORVU2Hr1G005220.2 , HORVU2Hr1G005220.5 , HORVU2Hr1G005220.4 , HORVU1Hr1G004830.1 , HORVU1Hr1G004840.3 , HORVU1Hr1G004840.2 , HORVU1Hr1G004840.1 , HORVU2Hr1G116390.1 , HORVU2Hr1G116390.2 , HORVU2Hr1G116390.3
Wheat TraesCS7B02G462200 , TraesCS2D02G034500 , TraesCS1B02G040500 , TraesCS1D02G033800 , TraesCS1B02G040200 , TraesCS2B02G558400 , TraesCS2B02G558400 , TraesCS1A02G032300 , TraesCS1D02G033600 , TraesCS5D02G488600 , TraesCS1B02G041000 , TraesCS2D02G027700 , TraesCS2A02G527700 , TraesCS2A02G527700 , TraesCS5D02G488700 , TraesCS2D02G530600
Populus -


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cDNA sequences
Sobic.007G058900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G059100 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
2 Sobic.007G215700 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.010G240400 beta-expansin precursor, putative, expressed -
4 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.002G023000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK83 - OsWAK pseudogene, expressed -
6 Sobic.007G058800 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
7 Sobic.001G291600 - -
8 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
10 Sobic.005G171100 - -
11 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.010G045000 VQ domain containing protein, putative -
14 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
15 Sobic.002G195200 - -
16 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
17 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
18 Sobic.001G145700 thaumatin, putative, expressed -
19 Sobic.005G126200 Leucine-rich repeat protein 1(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
20 Sobic.008G009100 SAG20, putative, expressed -


Gene co-expression network
sample Sobic007G058900 Sobic007G058900 Sobic007G059100 Sobic007G059100 Sobic007G058900--Sobic007G059100 Sobic007G215700 Sobic007G215700 Sobic007G058900--Sobic007G215700 Sobic010G240400 Sobic010G240400 Sobic007G058900--Sobic010G240400 Sobic003G031100 Sobic003G031100 Sobic007G058900--Sobic003G031100 Sobic002G023000 Sobic002G023000 Sobic007G058900--Sobic002G023000 Sobic007G058800 Sobic007G058800 Sobic007G058900--Sobic007G058800 Sobic001G291600 Sobic001G291600 Sobic007G058900--Sobic001G291600 Sobic009G073500 Sobic009G073500 Sobic007G058900--Sobic009G073500 Sobic008G146700 Sobic008G146700 Sobic007G058900--Sobic008G146700 Sobic007G059100--Sobic007G058800 Sobic007G059100--Sobic002G023000 Sobic007G059100--Sobic010G240400 Sobic002G327700 Sobic002G327700 Sobic007G059100--Sobic002G327700 Sobic002G195200 Sobic002G195200 Sobic007G059100--Sobic002G195200 Sobic007G059100--Sobic007G058900 Sobic010G231000 Sobic010G231000 Sobic007G059100--Sobic010G231000 Sobic004G258300 Sobic004G258300 Sobic007G059100--Sobic004G258300 Sobic005G126100 Sobic005G126100 Sobic007G059100--Sobic005G126100 Sobic002G195300 Sobic002G195300 Sobic007G215700--Sobic002G195300 Sobic010G045000 Sobic010G045000 Sobic007G215700--Sobic010G045000 Sobic007G215700--Sobic002G195200 Sobic003G291700 Sobic003G291700 Sobic007G215700--Sobic003G291700 Sobic007G214300 Sobic007G214300 Sobic007G215700--Sobic007G214300 Sobic006G003700 Sobic006G003700 Sobic007G215700--Sobic006G003700 Sobic008G060200 Sobic008G060200 Sobic007G215700--Sobic008G060200 Sobic004G223500 Sobic004G223500 Sobic007G215700--Sobic004G223500 Sobic007G215700--Sobic007G058900 Sobic010G240400--Sobic009G073500 Sobic010G240400--Sobic010G231000 Sobic010G240400--Sobic005G126100 Sobic005G084300 Sobic005G084300 Sobic010G240400--Sobic005G084300 Sobic010G240400--Sobic008G146700 Sobic010G172800 Sobic010G172800 Sobic010G240400--Sobic010G172800 Sobic010G240400--Sobic007G059100 Sobic010G240400--Sobic001G291600 Sobic008G182400 Sobic008G182400 Sobic010G240400--Sobic008G182400 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic005G171100 Sobic005G171100 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic003G031100--Sobic009G073500 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic003G031100--Sobic008G146700 Sobic002G023000--Sobic007G058800 Sobic002G023000--Sobic007G059100 Sobic002G195100 Sobic002G195100 Sobic002G023000--Sobic002G195100 Sobic002G023000--Sobic002G195200 Sobic002G023000--Sobic007G214300 Sobic002G023000--Sobic007G215700 Sobic002G023000--Sobic007G058900 Sobic002G023000--Sobic004G258300 Sobic002G023000--Sobic002G327700 Sobic007G058800--Sobic007G059100 Sobic007G058800--Sobic002G023000 Sobic007G058800--Sobic002G195200 Sobic007G058800--Sobic002G195100 Sobic007G058800--Sobic002G327700 Sobic007G058800--Sobic007G214300 Sobic007G058800--Sobic004G258300 Sobic007G058800--Sobic007G058900 Sobic007G058800--Sobic010G240400 Sobic001G291600--Sobic009G073500 Sobic005G145950 Sobic005G145950 Sobic001G291600--Sobic005G145950 Sobic001G099400 Sobic001G099400 Sobic001G291600--Sobic001G099400 Sobic002G065800 Sobic002G065800 Sobic001G291600--Sobic002G065800 Sobic001G291600--Sobic010G240400 Sobic001G291600--Sobic010G172800 Sobic001G291600--Sobic005G126100 Sobic001G291600--Sobic008G146700 Sobic001G311866 Sobic001G311866 Sobic001G291600--Sobic001G311866 Sobic008G182800 Sobic008G182800 Sobic009G073500--Sobic008G182800 Sobic009G073500--Sobic010G240400 Sobic009G073500--Sobic001G291600 Sobic005G169200 Sobic005G169200 Sobic009G073500--Sobic005G169200 Sobic009G073500--Sobic001G099400 Sobic009G073500--Sobic010G231000 Sobic009G073500--Sobic002G065800 Sobic009G073500--Sobic008G182400 Sobic009G073500--Sobic005G084300 Sobic008G146700--Sobic005G084300 Sobic008G146700--Sobic004G258300 Sobic008G146700--Sobic005G171100 Sobic002G327900 Sobic002G327900 Sobic008G146700--Sobic002G327900 Sobic008G182900 Sobic008G182900 Sobic008G146700--Sobic008G182900 Sobic008G146700--Sobic010G240400 Sobic008G146700--Sobic002G327700 Sobic002G327800 Sobic002G327800 Sobic008G146700--Sobic002G327800 Sobic008G146700--Sobic009G073500
Octagon: transcription factors


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