Gene annotation
Transcriptome id Sobic.005G126200.1
Synonym ATSERK2, SORBI_3005G126200, SERK2, SORBIDRAFT_05g018800, Sb05g018800
Functional annotation Leucine-rich repeat protein 1 (PubMedID : 31721651)
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
UniProt C5Y2R8 , P93529
Pfam PF08263 PF13855
Panther DB PTHR27001 PTHR27001:SF224
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G34210 : somatic embryogenesis receptor-like kinase 2
RAP-DB (Rice) LOC_Os11g31540.1 : BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a029787 , Zm00025a015664
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G131700 - -
2 Sobic.008G182600 thaumatin, putative, expressed -
3 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.008G182800 thaumatin, putative, expressed -
5 Sobic.006G226800 enzyme relate to 3-deoxyanthocyanidine pathway P/tan gene(PubMedID : 26994288)@leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
6 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.001G145700 thaumatin, putative, expressed -
8 Sobic.006G117400 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
9 Sobic.009G181200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
12 Sobic.005G169200 WIP3 - Wound-induced protein precursor, expressed -
13 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
14 Sobic.004G175900 protein transport protein Sec61 subunit alpha, putative, expressed K10956: protein transport protein SEC61 subunit alpha
15 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.002G013400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G065700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.002G000400 "A single-copy gene, share a similar catalytic mechanism with the licorice and Medicago truncatula FNSIIs (CYP93B subfamily) by converting flavanones to flavone through the formation of 2-hydroxyflavanones, CYP93B subfamily"(PubMedID : 20007684)@enzyme relate to flavone pathway(PubMedID : 27917182)@cytochrome P450, putative, expressed -
19 Sobic.003G216232 - -
20 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic005G126200 Sobic005G126200 Sobic005G131700 Sobic005G131700 Sobic005G126200--Sobic005G131700 Sobic008G182600 Sobic008G182600 Sobic005G126200--Sobic008G182600 Sobic009G073500 Sobic009G073500 Sobic005G126200--Sobic009G073500 Sobic008G182800 Sobic008G182800 Sobic005G126200--Sobic008G182800 Sobic006G226800 Sobic006G226800 Sobic005G126200--Sobic006G226800 Sobic003G031100 Sobic003G031100 Sobic005G126200--Sobic003G031100 Sobic001G145700 Sobic001G145700 Sobic005G126200--Sobic001G145700 Sobic006G117400 Sobic006G117400 Sobic005G126200--Sobic006G117400 Sobic009G181200 Sobic009G181200 Sobic005G126200--Sobic009G181200 Sobic005G131700--Sobic005G126200 Sobic005G037100 Sobic005G037100 Sobic005G131700--Sobic005G037100 Sobic005G136300 Sobic005G136300 Sobic005G131700--Sobic005G136300 Sobic002G000400 Sobic002G000400 Sobic005G131700--Sobic002G000400 Sobic005G131700--Sobic003G031100 Sobic006G132500 Sobic006G132500 Sobic005G131700--Sobic006G132500 Sobic005G131700--Sobic008G182600 Sobic005G131700--Sobic006G226800 Sobic001G401300 Sobic001G401300 Sobic005G131700--Sobic001G401300 Sobic008G182600--Sobic008G182800 Sobic005G169200 Sobic005G169200 Sobic008G182600--Sobic005G169200 Sobic008G182300 Sobic008G182300 Sobic008G182600--Sobic008G182300 Sobic008G182600--Sobic001G145700 Sobic008G182600--Sobic006G117400 Sobic008G182600--Sobic009G181200 Sobic008G182600--Sobic005G126200 Sobic008G182600--Sobic009G073500 Sobic008G182400 Sobic008G182400 Sobic008G182600--Sobic008G182400 Sobic009G073500--Sobic008G182800 Sobic010G240400 Sobic010G240400 Sobic009G073500--Sobic010G240400 Sobic001G291600 Sobic001G291600 Sobic009G073500--Sobic001G291600 Sobic009G073500--Sobic005G169200 Sobic001G099400 Sobic001G099400 Sobic009G073500--Sobic001G099400 Sobic010G231000 Sobic010G231000 Sobic009G073500--Sobic010G231000 Sobic002G065800 Sobic002G065800 Sobic009G073500--Sobic002G065800 Sobic009G073500--Sobic008G182400 Sobic005G084300 Sobic005G084300 Sobic009G073500--Sobic005G084300 Sobic008G182800--Sobic008G182600 Sobic008G182800--Sobic005G169200 Sobic008G182800--Sobic008G182400 Sobic008G182800--Sobic009G073500 Sobic008G182800--Sobic006G117400 Sobic008G182800--Sobic002G065800 Sobic008G182800--Sobic010G231000 Sobic002G065500 Sobic002G065500 Sobic008G182800--Sobic002G065500 Sobic002G065700 Sobic002G065700 Sobic008G182800--Sobic002G065700 Sobic006G226800--Sobic005G126200 Sobic006G226800--Sobic005G136300 Sobic006G226800--Sobic002G000400 Sobic005G224900 Sobic005G224900 Sobic006G226800--Sobic005G224900 Sobic006G226800--Sobic005G131700 Sobic006G226800--Sobic003G031100 Sobic003G216232 Sobic003G216232 Sobic006G226800--Sobic003G216232 Sobic009G041000 Sobic009G041000 Sobic006G226800--Sobic009G041000 Sobic001G409200 Sobic001G409200 Sobic006G226800--Sobic001G409200 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic003G031100--Sobic005G126200 Sobic005G171100 Sobic005G171100 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic001G145700--Sobic005G169200 Sobic001G145700--Sobic008G182300 Sobic001G145700--Sobic008G182600 Sobic001G145700--Sobic009G181200 Sobic001G145700--Sobic008G182800 Sobic001G145600 Sobic001G145600 Sobic001G145700--Sobic001G145600 Sobic010G230800 Sobic010G230800 Sobic001G145700--Sobic010G230800 Sobic001G145700--Sobic009G073500 Sobic006G076800 Sobic006G076800 Sobic001G145700--Sobic006G076800 Sobic006G117400--Sobic002G065500 Sobic002G065600 Sobic002G065600 Sobic006G117400--Sobic002G065600 Sobic006G117400--Sobic008G182400 Sobic006G117400--Sobic002G065700 Sobic006G117400--Sobic001G099400 Sobic010G172800 Sobic010G172800 Sobic006G117400--Sobic010G172800 Sobic006G117400--Sobic008G182800 Sobic006G117400--Sobic010G231000 Sobic006G117400--Sobic002G065800 Sobic009G181200--Sobic001G145700 Sobic009G181200--Sobic006G117400 Sobic009G181200--Sobic008G182800 Sobic009G181200--Sobic010G230800 Sobic009G181200--Sobic008G182600 Sobic009G181200--Sobic002G065700 Sobic010G230900 Sobic010G230900 Sobic009G181200--Sobic010G230900 Sobic009G181200--Sobic005G169200 Sobic010G020200 Sobic010G020200 Sobic009G181200--Sobic010G020200
Octagon: transcription factors


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