Gene annotation
Transcriptome id Sobic.005G169200.1
Synonym PR4, HEL, PR-4, Sb05g022940
Functional annotation WIP3 - Wound-induced protein precursor, expressed
UniProt C5Y5D4
Pfam PF00967
Panther DB PTHR22595 PTHR22595:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04720 : pathogenesis-related 4
RAP-DB (Rice) LOC_Os11g37960.1 : WIP4 - Wound-induced protein precursor, expressed
MaizeGDB (Corn) Zm00025a029501 , Zm00025a029500 , Zm00025a029495 , Zm00025a029499
Brachypodium KQJ88014
Barley HORVU3Hr1G113120.2 , HORVU3Hr1G113620.1 , HORVU3Hr1G113120.1 , HORVU6Hr1G092630.1 , HORVU6Hr1G092630.2 , HORVU6Hr1G092630.3
Wheat TraesCS1B02G366300 , TraesCS1D02G355100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G182800 thaumatin, putative, expressed -
2 Sobic.008G182600 thaumatin, putative, expressed -
3 Sobic.001G145700 thaumatin, putative, expressed -
4 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
5 Sobic.008G182300 thaumatin, putative, expressed -
6 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
9 Sobic.008G182400 thaumatin, putative, expressed -
10 Sobic.002G065700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.009G181200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.005G084300 glycosyl hydrolase, putative, expressed -
13 Sobic.006G117400 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
14 Sobic.006G076800 serine/threonine-protein kinase receptor precursor, putative, expressed -
15 Sobic.002G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed -
16 Sobic.010G240400 beta-expansin precursor, putative, expressed -
17 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
18 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
20 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II


Gene co-expression network
sample Sobic005G169200 Sobic005G169200 Sobic008G182800 Sobic008G182800 Sobic005G169200--Sobic008G182800 Sobic008G182600 Sobic008G182600 Sobic005G169200--Sobic008G182600 Sobic001G145700 Sobic001G145700 Sobic005G169200--Sobic001G145700 Sobic010G230800 Sobic010G230800 Sobic005G169200--Sobic010G230800 Sobic008G182300 Sobic008G182300 Sobic005G169200--Sobic008G182300 Sobic009G073500 Sobic009G073500 Sobic005G169200--Sobic009G073500 Sobic010G230900 Sobic010G230900 Sobic005G169200--Sobic010G230900 Sobic010G231000 Sobic010G231000 Sobic005G169200--Sobic010G231000 Sobic008G182400 Sobic008G182400 Sobic005G169200--Sobic008G182400 Sobic008G182800--Sobic008G182600 Sobic008G182800--Sobic005G169200 Sobic008G182800--Sobic008G182400 Sobic008G182800--Sobic009G073500 Sobic006G117400 Sobic006G117400 Sobic008G182800--Sobic006G117400 Sobic002G065800 Sobic002G065800 Sobic008G182800--Sobic002G065800 Sobic008G182800--Sobic010G231000 Sobic002G065500 Sobic002G065500 Sobic008G182800--Sobic002G065500 Sobic002G065700 Sobic002G065700 Sobic008G182800--Sobic002G065700 Sobic008G182600--Sobic008G182800 Sobic008G182600--Sobic005G169200 Sobic008G182600--Sobic008G182300 Sobic008G182600--Sobic001G145700 Sobic008G182600--Sobic006G117400 Sobic009G181200 Sobic009G181200 Sobic008G182600--Sobic009G181200 Sobic005G126200 Sobic005G126200 Sobic008G182600--Sobic005G126200 Sobic008G182600--Sobic009G073500 Sobic008G182600--Sobic008G182400 Sobic001G145700--Sobic005G169200 Sobic001G145700--Sobic008G182300 Sobic001G145700--Sobic008G182600 Sobic001G145700--Sobic009G181200 Sobic001G145700--Sobic008G182800 Sobic001G145600 Sobic001G145600 Sobic001G145700--Sobic001G145600 Sobic001G145700--Sobic010G230800 Sobic001G145700--Sobic009G073500 Sobic006G076800 Sobic006G076800 Sobic001G145700--Sobic006G076800 Sobic010G230800--Sobic010G230900 Sobic010G230800--Sobic010G231000 Sobic010G230800--Sobic002G065700 Sobic010G230800--Sobic005G169200 Sobic010G230800--Sobic008G182800 Sobic010G230800--Sobic001G145700 Sobic010G230800--Sobic009G073500 Sobic010G230800--Sobic009G181200 Sobic002G065600 Sobic002G065600 Sobic010G230800--Sobic002G065600 Sobic008G182300--Sobic008G182600 Sobic008G182300--Sobic005G169200 Sobic006G132500 Sobic006G132500 Sobic008G182300--Sobic006G132500 Sobic008G182300--Sobic001G145700 Sobic008G182300--Sobic008G182800 Sobic005G169400 Sobic005G169400 Sobic008G182300--Sobic005G169400 Sobic008G182300--Sobic001G145600 Sobic002G023300 Sobic002G023300 Sobic008G182300--Sobic002G023300 Sobic003G244600 Sobic003G244600 Sobic008G182300--Sobic003G244600 Sobic009G073500--Sobic008G182800 Sobic010G240400 Sobic010G240400 Sobic009G073500--Sobic010G240400 Sobic001G291600 Sobic001G291600 Sobic009G073500--Sobic001G291600 Sobic009G073500--Sobic005G169200 Sobic001G099400 Sobic001G099400 Sobic009G073500--Sobic001G099400 Sobic009G073500--Sobic010G231000 Sobic009G073500--Sobic002G065800 Sobic009G073500--Sobic008G182400 Sobic005G084300 Sobic005G084300 Sobic009G073500--Sobic005G084300 Sobic010G230900--Sobic010G230800 Sobic010G230900--Sobic002G065700 Sobic010G230900--Sobic010G231000 Sobic010G230900--Sobic005G169200 Sobic010G230900--Sobic001G145700 Sobic010G230900--Sobic008G182800 Sobic010G230900--Sobic009G181200 Sobic002G024400 Sobic002G024400 Sobic010G230900--Sobic002G024400 Sobic010G230900--Sobic009G073500 Sobic010G231000--Sobic002G065700 Sobic005G126100 Sobic005G126100 Sobic010G231000--Sobic005G126100 Sobic010G231000--Sobic002G065600 Sobic010G231000--Sobic010G230800 Sobic010G231000--Sobic002G065500 Sobic010G172800 Sobic010G172800 Sobic010G231000--Sobic010G172800 Sobic010G231000--Sobic008G182400 Sobic010G231000--Sobic006G117400 Sobic010G231000--Sobic010G230900 Sobic008G182400--Sobic002G065500 Sobic008G182400--Sobic002G065800 Sobic008G182400--Sobic002G065600 Sobic008G182400--Sobic005G126100 Sobic008G182400--Sobic001G099400 Sobic008G182400--Sobic010G172800 Sobic004G197100 Sobic004G197100 Sobic008G182400--Sobic004G197100 Sobic008G182400--Sobic010G231000 Sobic008G182400--Sobic006G117400
Octagon: transcription factors


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