Gene annotation
Transcriptome id Sobic.010G240400.1
Synonym Sb10g028070
Functional annotation beta-expansin precursor, putative, expressed
UniProt C5Z8N5
Pfam PF03330
Panther DB PTHR22595 PTHR22595:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30380 : Barwin-related endoglucanase
RAP-DB (Rice) LOC_Os06g47360.1 : beta-expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a041834
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
3 Sobic.005G126100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
4 Sobic.005G084300 glycosyl hydrolase, putative, expressed -
5 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
6 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.007G059100 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
8 Sobic.001G291600 - -
9 Sobic.008G182400 thaumatin, putative, expressed -
10 Sobic.008G182800 thaumatin, putative, expressed -
11 Sobic.007G070400 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
12 Sobic.010G020200 SCP-like extracellular protein, expressed -
13 Sobic.004G197100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
14 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
15 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
16 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
19 Sobic.005G169200 WIP3 - Wound-induced protein precursor, expressed -
20 Sobic.002G065700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic010G240400 Sobic010G240400 Sobic009G073500 Sobic009G073500 Sobic010G240400--Sobic009G073500 Sobic010G231000 Sobic010G231000 Sobic010G240400--Sobic010G231000 Sobic005G126100 Sobic005G126100 Sobic010G240400--Sobic005G126100 Sobic005G084300 Sobic005G084300 Sobic010G240400--Sobic005G084300 Sobic008G146700 Sobic008G146700 Sobic010G240400--Sobic008G146700 Sobic010G172800 Sobic010G172800 Sobic010G240400--Sobic010G172800 Sobic007G059100 Sobic007G059100 Sobic010G240400--Sobic007G059100 Sobic001G291600 Sobic001G291600 Sobic010G240400--Sobic001G291600 Sobic008G182400 Sobic008G182400 Sobic010G240400--Sobic008G182400 Sobic008G182800 Sobic008G182800 Sobic009G073500--Sobic008G182800 Sobic009G073500--Sobic010G240400 Sobic009G073500--Sobic001G291600 Sobic005G169200 Sobic005G169200 Sobic009G073500--Sobic005G169200 Sobic001G099400 Sobic001G099400 Sobic009G073500--Sobic001G099400 Sobic009G073500--Sobic010G231000 Sobic002G065800 Sobic002G065800 Sobic009G073500--Sobic002G065800 Sobic009G073500--Sobic008G182400 Sobic009G073500--Sobic005G084300 Sobic002G065700 Sobic002G065700 Sobic010G231000--Sobic002G065700 Sobic010G231000--Sobic005G126100 Sobic002G065600 Sobic002G065600 Sobic010G231000--Sobic002G065600 Sobic010G230800 Sobic010G230800 Sobic010G231000--Sobic010G230800 Sobic002G065500 Sobic002G065500 Sobic010G231000--Sobic002G065500 Sobic010G231000--Sobic010G172800 Sobic010G231000--Sobic008G182400 Sobic006G117400 Sobic006G117400 Sobic010G231000--Sobic006G117400 Sobic010G230900 Sobic010G230900 Sobic010G231000--Sobic010G230900 Sobic005G126100--Sobic002G065500 Sobic005G126100--Sobic010G172800 Sobic005G126100--Sobic002G065800 Sobic005G126100--Sobic008G182400 Sobic005G126100--Sobic010G231000 Sobic005G126100--Sobic002G065600 Sobic005G126100--Sobic001G099400 Sobic004G197100 Sobic004G197100 Sobic005G126100--Sobic004G197100 Sobic005G126100--Sobic002G065700 Sobic005G084300--Sobic008G146700 Sobic005G084300--Sobic009G073500 Sobic005G084300--Sobic010G240400 Sobic002G327900 Sobic002G327900 Sobic005G084300--Sobic002G327900 Sobic005G084300--Sobic005G169200 Sobic002G327800 Sobic002G327800 Sobic005G084300--Sobic002G327800 Sobic004G258300 Sobic004G258300 Sobic005G084300--Sobic004G258300 Sobic002G327700 Sobic002G327700 Sobic005G084300--Sobic002G327700 Sobic008G182900 Sobic008G182900 Sobic005G084300--Sobic008G182900 Sobic008G146700--Sobic005G084300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic008G146700--Sobic010G240400 Sobic008G146700--Sobic002G327700 Sobic008G146700--Sobic002G327800 Sobic008G146700--Sobic009G073500 Sobic010G172800--Sobic005G126100 Sobic010G172800--Sobic002G065500 Sobic010G172800--Sobic008G182400 Sobic010G172800--Sobic002G065600 Sobic010G172800--Sobic010G231000 Sobic010G172800--Sobic001G099400 Sobic010G172800--Sobic002G065800 Sobic003G035801 Sobic003G035801 Sobic010G172800--Sobic003G035801 Sobic010G172800--Sobic006G117400 Sobic007G058800 Sobic007G058800 Sobic007G059100--Sobic007G058800 Sobic002G023000 Sobic002G023000 Sobic007G059100--Sobic002G023000 Sobic007G059100--Sobic010G240400 Sobic007G059100--Sobic002G327700 Sobic002G195200 Sobic002G195200 Sobic007G059100--Sobic002G195200 Sobic007G058900 Sobic007G058900 Sobic007G059100--Sobic007G058900 Sobic007G059100--Sobic010G231000 Sobic007G059100--Sobic004G258300 Sobic007G059100--Sobic005G126100 Sobic001G291600--Sobic009G073500 Sobic005G145950 Sobic005G145950 Sobic001G291600--Sobic005G145950 Sobic001G291600--Sobic001G099400 Sobic001G291600--Sobic002G065800 Sobic001G291600--Sobic010G240400 Sobic001G291600--Sobic010G172800 Sobic001G291600--Sobic005G126100 Sobic001G291600--Sobic008G146700 Sobic001G311866 Sobic001G311866 Sobic001G291600--Sobic001G311866 Sobic008G182400--Sobic002G065500 Sobic008G182400--Sobic002G065800 Sobic008G182400--Sobic002G065600 Sobic008G182400--Sobic005G126100 Sobic008G182400--Sobic001G099400 Sobic008G182400--Sobic010G172800 Sobic008G182400--Sobic004G197100 Sobic008G182400--Sobic010G231000 Sobic008G182400--Sobic006G117400
Octagon: transcription factors


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