Gene annotation
Transcriptome id Sobic.005G084300.1
Synonym Sb05g006880
Functional annotation glycosyl hydrolase, putative, expressed
UniProt C5Y7R1
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF163
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g28120.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a021560 , Zm00025a025298 , Zm00025a029565
Brachypodium KQJ96728 , KQJ96730
Barley HORVU7Hr1G084920.2 , HORVU7Hr1G084920.1 , HORVU1Hr1G072250.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
2 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.010G240400 beta-expansin precursor, putative, expressed -
4 Sobic.002G327900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.005G169200 WIP3 - Wound-induced protein precursor, expressed -
6 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
8 Sobic.002G327700 TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.008G182900 thaumatin, putative, expressed -
10 Sobic.001G145700 thaumatin, putative, expressed -
11 Sobic.010G231000 Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
12 Sobic.008G182800 thaumatin, putative, expressed -
13 Sobic.010G172800 down-regulated TF in developmental senescence(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.007G070400 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
15 Sobic.010G230800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
16 Sobic.003G421700 "beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
17 Sobic.005G126100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.008G182400 thaumatin, putative, expressed -
20 Sobic.005G171100 - -


Gene co-expression network
sample Sobic005G084300 Sobic005G084300 Sobic008G146700 Sobic008G146700 Sobic005G084300--Sobic008G146700 Sobic009G073500 Sobic009G073500 Sobic005G084300--Sobic009G073500 Sobic010G240400 Sobic010G240400 Sobic005G084300--Sobic010G240400 Sobic002G327900 Sobic002G327900 Sobic005G084300--Sobic002G327900 Sobic005G169200 Sobic005G169200 Sobic005G084300--Sobic005G169200 Sobic002G327800 Sobic002G327800 Sobic005G084300--Sobic002G327800 Sobic004G258300 Sobic004G258300 Sobic005G084300--Sobic004G258300 Sobic002G327700 Sobic002G327700 Sobic005G084300--Sobic002G327700 Sobic008G182900 Sobic008G182900 Sobic005G084300--Sobic008G182900 Sobic008G146700--Sobic005G084300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic008G146700--Sobic010G240400 Sobic008G146700--Sobic002G327700 Sobic008G146700--Sobic002G327800 Sobic008G146700--Sobic009G073500 Sobic008G182800 Sobic008G182800 Sobic009G073500--Sobic008G182800 Sobic009G073500--Sobic010G240400 Sobic001G291600 Sobic001G291600 Sobic009G073500--Sobic001G291600 Sobic009G073500--Sobic005G169200 Sobic001G099400 Sobic001G099400 Sobic009G073500--Sobic001G099400 Sobic010G231000 Sobic010G231000 Sobic009G073500--Sobic010G231000 Sobic002G065800 Sobic002G065800 Sobic009G073500--Sobic002G065800 Sobic008G182400 Sobic008G182400 Sobic009G073500--Sobic008G182400 Sobic009G073500--Sobic005G084300 Sobic010G240400--Sobic009G073500 Sobic010G240400--Sobic010G231000 Sobic005G126100 Sobic005G126100 Sobic010G240400--Sobic005G126100 Sobic010G240400--Sobic005G084300 Sobic010G240400--Sobic008G146700 Sobic010G172800 Sobic010G172800 Sobic010G240400--Sobic010G172800 Sobic007G059100 Sobic007G059100 Sobic010G240400--Sobic007G059100 Sobic010G240400--Sobic001G291600 Sobic010G240400--Sobic008G182400 Sobic002G327900--Sobic004G258300 Sobic002G327900--Sobic002G327700 Sobic002G327900--Sobic002G327800 Sobic010G128000 Sobic010G128000 Sobic002G327900--Sobic010G128000 Sobic002G327900--Sobic008G146700 Sobic007G070400 Sobic007G070400 Sobic002G327900--Sobic007G070400 Sobic002G327900--Sobic005G084300 Sobic002G327900--Sobic008G182900 Sobic001G184100 Sobic001G184100 Sobic002G327900--Sobic001G184100 Sobic005G169200--Sobic008G182800 Sobic008G182600 Sobic008G182600 Sobic005G169200--Sobic008G182600 Sobic001G145700 Sobic001G145700 Sobic005G169200--Sobic001G145700 Sobic010G230800 Sobic010G230800 Sobic005G169200--Sobic010G230800 Sobic008G182300 Sobic008G182300 Sobic005G169200--Sobic008G182300 Sobic005G169200--Sobic009G073500 Sobic010G230900 Sobic010G230900 Sobic005G169200--Sobic010G230900 Sobic005G169200--Sobic010G231000 Sobic005G169200--Sobic008G182400 Sobic002G327800--Sobic002G327700 Sobic002G327800--Sobic004G258300 Sobic002G327800--Sobic002G327900 Sobic002G327800--Sobic010G128000 Sobic002G327800--Sobic008G182900 Sobic005G055900 Sobic005G055900 Sobic002G327800--Sobic005G055900 Sobic004G144700 Sobic004G144700 Sobic002G327800--Sobic004G144700 Sobic002G327800--Sobic008G146700 Sobic002G327800--Sobic005G084300 Sobic004G258300--Sobic002G327700 Sobic004G258300--Sobic002G327900 Sobic004G258300--Sobic002G327800 Sobic004G258300--Sobic008G146700 Sobic004G258300--Sobic008G182900 Sobic004G258300--Sobic010G128000 Sobic002G195200 Sobic002G195200 Sobic004G258300--Sobic002G195200 Sobic007G058800 Sobic007G058800 Sobic004G258300--Sobic007G058800 Sobic004G258300--Sobic005G084300 Sobic002G327700--Sobic004G258300 Sobic002G327700--Sobic002G327800 Sobic002G327700--Sobic002G327900 Sobic002G327700--Sobic008G146700 Sobic002G327700--Sobic007G058800 Sobic002G327700--Sobic007G059100 Sobic002G327700--Sobic002G195200 Sobic002G327700--Sobic001G184100 Sobic002G327700--Sobic008G182900 Sobic008G182900--Sobic008G146700 Sobic008G182900--Sobic002G327800 Sobic008G182900--Sobic004G258300 Sobic008G182900--Sobic002G327700 Sobic008G182900--Sobic002G327900 Sobic008G182900--Sobic005G171100 Sobic008G182900--Sobic005G084300 Sobic002G209100 Sobic002G209100 Sobic008G182900--Sobic002G209100 Sobic005G063900 Sobic005G063900 Sobic008G182900--Sobic005G063900
Octagon: transcription factors


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