Gene annotation
Transcriptome id Sobic.004G258300.1
Synonym Sb04g029670
Functional annotation aspartic proteinase nepenthesin-2 precursor, putative, expressed
UniProt C5XZU2
Pfam PF14541
Panther DB PTHR13683 PTHR13683:SF290
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT5G10770 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os02g48870.1 : aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a032596 , Zm00025a032595
Brachypodium PNT69511 , KQK01062
Barley HORVU0Hr1G016890.2 , HORVU0Hr1G016890.1 , HORVU7Hr1G109730.3 , HORVU7Hr1G109730.2 , HORVU7Hr1G109730.1 , HORVU7Hr1G109750.1 , HORVU7Hr1G109750.3 , HORVU7Hr1G109750.2 , HORVU7Hr1G109750.5 , HORVU7Hr1G109750.4 , HORVU7Hr1G109750.7 , HORVU7Hr1G109750.6 , HORVU6Hr1G071160.1 , HORVU6Hr1G071190.4 , HORVU6Hr1G071190.5 , HORVU6Hr1G071190.2 , HORVU6Hr1G071190.3 , HORVU6Hr1G071190.1
Wheat TraesCS7D02G475600 , TraesCS6D02G263700 , TraesCS7D02G475500 , TraesCS6A02G283500 , TraesCS7A02G489300 , TraesCS7A02G489300 , TraesCS6B02G312300 , TraesCS7A02G489200 , TraesCSU02G254900 , TraesCSU02G254900 , TraesCS7B02G392400 , TraesCS6D02G263900 , TraesCS6B02G312200 , TraesCS6A02G283400 , TraesCS7B02G392300 , TraesCS6D02G264000 , TraesCS6D02G264000 , TraesCS7D02G475300 , TraesCS7A02G489400 , TraesCS7A02G489400 , TraesCS7B02G392500 , TraesCS7A02G489000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G327700 TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.002G327900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
3 Sobic.002G327800 TKL_IRAK_DUF26-lc.12 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
5 Sobic.008G182900 thaumatin, putative, expressed -
6 Sobic.010G128000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
7 Sobic.002G195200 - -
8 Sobic.007G058800 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
9 Sobic.005G084300 glycosyl hydrolase, putative, expressed -
10 Sobic.007G215700 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
11 Sobic.002G023000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK83 - OsWAK pseudogene, expressed -
12 Sobic.005G171100 - -
13 Sobic.007G059100 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
14 Sobic.001G184100 Osmotic stress potassium transporter(PubMedID : 28620409)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
15 Sobic.005G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
16 Sobic.007G214300 OsWAK14 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
18 Sobic.010G155300 VQ domain containing protein, putative, expressed -
19 Sobic.007G070400 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
20 Sobic.004G210601 - -


Gene co-expression network
sample Sobic004G258300 Sobic004G258300 Sobic002G327700 Sobic002G327700 Sobic004G258300--Sobic002G327700 Sobic002G327900 Sobic002G327900 Sobic004G258300--Sobic002G327900 Sobic002G327800 Sobic002G327800 Sobic004G258300--Sobic002G327800 Sobic008G146700 Sobic008G146700 Sobic004G258300--Sobic008G146700 Sobic008G182900 Sobic008G182900 Sobic004G258300--Sobic008G182900 Sobic010G128000 Sobic010G128000 Sobic004G258300--Sobic010G128000 Sobic002G195200 Sobic002G195200 Sobic004G258300--Sobic002G195200 Sobic007G058800 Sobic007G058800 Sobic004G258300--Sobic007G058800 Sobic005G084300 Sobic005G084300 Sobic004G258300--Sobic005G084300 Sobic002G327700--Sobic004G258300 Sobic002G327700--Sobic002G327800 Sobic002G327700--Sobic002G327900 Sobic002G327700--Sobic008G146700 Sobic002G327700--Sobic007G058800 Sobic007G059100 Sobic007G059100 Sobic002G327700--Sobic007G059100 Sobic002G327700--Sobic002G195200 Sobic001G184100 Sobic001G184100 Sobic002G327700--Sobic001G184100 Sobic002G327700--Sobic008G182900 Sobic002G327900--Sobic004G258300 Sobic002G327900--Sobic002G327700 Sobic002G327900--Sobic002G327800 Sobic002G327900--Sobic010G128000 Sobic002G327900--Sobic008G146700 Sobic007G070400 Sobic007G070400 Sobic002G327900--Sobic007G070400 Sobic002G327900--Sobic005G084300 Sobic002G327900--Sobic008G182900 Sobic002G327900--Sobic001G184100 Sobic002G327800--Sobic002G327700 Sobic002G327800--Sobic004G258300 Sobic002G327800--Sobic002G327900 Sobic002G327800--Sobic010G128000 Sobic002G327800--Sobic008G182900 Sobic005G055900 Sobic005G055900 Sobic002G327800--Sobic005G055900 Sobic004G144700 Sobic004G144700 Sobic002G327800--Sobic004G144700 Sobic002G327800--Sobic008G146700 Sobic002G327800--Sobic005G084300 Sobic008G146700--Sobic005G084300 Sobic008G146700--Sobic004G258300 Sobic005G171100 Sobic005G171100 Sobic008G146700--Sobic005G171100 Sobic008G146700--Sobic002G327900 Sobic008G146700--Sobic008G182900 Sobic010G240400 Sobic010G240400 Sobic008G146700--Sobic010G240400 Sobic008G146700--Sobic002G327700 Sobic008G146700--Sobic002G327800 Sobic009G073500 Sobic009G073500 Sobic008G146700--Sobic009G073500 Sobic008G182900--Sobic008G146700 Sobic008G182900--Sobic002G327800 Sobic008G182900--Sobic004G258300 Sobic008G182900--Sobic002G327700 Sobic008G182900--Sobic002G327900 Sobic008G182900--Sobic005G171100 Sobic008G182900--Sobic005G084300 Sobic002G209100 Sobic002G209100 Sobic008G182900--Sobic002G209100 Sobic005G063900 Sobic005G063900 Sobic008G182900--Sobic005G063900 Sobic001G435500 Sobic001G435500 Sobic010G128000--Sobic001G435500 Sobic001G066600 Sobic001G066600 Sobic010G128000--Sobic001G066600 Sobic008G117300 Sobic008G117300 Sobic010G128000--Sobic008G117300 Sobic009G229700 Sobic009G229700 Sobic010G128000--Sobic009G229700 Sobic007G090475 Sobic007G090475 Sobic010G128000--Sobic007G090475 Sobic001G070500 Sobic001G070500 Sobic010G128000--Sobic001G070500 Sobic010G189300 Sobic010G189300 Sobic010G128000--Sobic010G189300 Sobic001G260850 Sobic001G260850 Sobic010G128000--Sobic001G260850 Sobic002G033900 Sobic002G033900 Sobic010G128000--Sobic002G033900 Sobic002G195100 Sobic002G195100 Sobic002G195200--Sobic002G195100 Sobic004G245300 Sobic004G245300 Sobic002G195200--Sobic004G245300 Sobic007G214300 Sobic007G214300 Sobic002G195200--Sobic007G214300 Sobic002G195300 Sobic002G195300 Sobic002G195200--Sobic002G195300 Sobic002G195200--Sobic007G058800 Sobic002G023000 Sobic002G023000 Sobic002G195200--Sobic002G023000 Sobic005G065500 Sobic005G065500 Sobic002G195200--Sobic005G065500 Sobic004G094600 Sobic004G094600 Sobic002G195200--Sobic004G094600 Sobic007G215700 Sobic007G215700 Sobic002G195200--Sobic007G215700 Sobic007G058800--Sobic007G059100 Sobic007G058800--Sobic002G023000 Sobic007G058800--Sobic002G195200 Sobic007G058800--Sobic002G195100 Sobic007G058800--Sobic002G327700 Sobic007G058800--Sobic007G214300 Sobic007G058800--Sobic004G258300 Sobic007G058900 Sobic007G058900 Sobic007G058800--Sobic007G058900 Sobic007G058800--Sobic010G240400 Sobic005G084300--Sobic008G146700 Sobic005G084300--Sobic009G073500 Sobic005G084300--Sobic010G240400 Sobic005G084300--Sobic002G327900 Sobic005G169200 Sobic005G169200 Sobic005G084300--Sobic005G169200 Sobic005G084300--Sobic002G327800 Sobic005G084300--Sobic004G258300 Sobic005G084300--Sobic002G327700 Sobic005G084300--Sobic008G182900
Octagon: transcription factors


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