Gene annotation
Transcriptome id Sobic.010G155300.1
Synonym Sb10g020870
Functional annotation VQ domain containing protein, putative, expressed
UniProt C5Z3P3
Pfam PF05678
Panther DB PTHR34777 PTHR34777:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g33970.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a050930
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
2 Sobic.001G318200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
3 Sobic.005G171100 - -
4 Sobic.006G231600 acetyltransferase, GNAT family, putative, expressed -
5 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
7 Sobic.004G158050 - -
8 Sobic.008G142100 No apical meristem protein, putative, expressed -
9 Sobic.001G381300 WRKY79, expressed -
10 Sobic.006G003700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.010G018300 expressed protein -
12 Sobic.001G339200 - -
13 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
14 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
15 Sobic.001G136300 nodulin family protein, putative, expressed -
16 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
17 Sobic.004G258300 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
18 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
19 Sobic.002G195200 - -
20 Sobic.002G418500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY47, expressed -


Gene co-expression network
sample Sobic010G155300 Sobic010G155300 Sobic001G146500 Sobic001G146500 Sobic010G155300--Sobic001G146500 Sobic001G318200 Sobic001G318200 Sobic010G155300--Sobic001G318200 Sobic005G171100 Sobic005G171100 Sobic010G155300--Sobic005G171100 Sobic006G231600 Sobic006G231600 Sobic010G155300--Sobic006G231600 Sobic001G319100 Sobic001G319100 Sobic010G155300--Sobic001G319100 Sobic006G190000 Sobic006G190000 Sobic010G155300--Sobic006G190000 Sobic004G158050 Sobic004G158050 Sobic010G155300--Sobic004G158050 Sobic008G142100 Sobic008G142100 Sobic010G155300--Sobic008G142100 Sobic001G381300 Sobic001G381300 Sobic010G155300--Sobic001G381300 Sobic001G259500 Sobic001G259500 Sobic001G146500--Sobic001G259500 Sobic010G018300 Sobic010G018300 Sobic001G146500--Sobic010G018300 Sobic002G241250 Sobic002G241250 Sobic001G146500--Sobic002G241250 Sobic004G052500 Sobic004G052500 Sobic001G146500--Sobic004G052500 Sobic001G146400 Sobic001G146400 Sobic001G146500--Sobic001G146400 Sobic010G102150 Sobic010G102150 Sobic001G318200--Sobic010G102150 Sobic007G115500 Sobic007G115500 Sobic001G318200--Sobic007G115500 Sobic001G059400 Sobic001G059400 Sobic001G318200--Sobic001G059400 Sobic001G318200--Sobic010G155300 Sobic005G080200 Sobic005G080200 Sobic001G318200--Sobic005G080200 Sobic004G195000 Sobic004G195000 Sobic001G318200--Sobic004G195000 Sobic005G182500 Sobic005G182500 Sobic001G318200--Sobic005G182500 Sobic003G228200 Sobic003G228200 Sobic001G318200--Sobic003G228200 Sobic010G075600 Sobic010G075600 Sobic001G318200--Sobic010G075600 Sobic008G146700 Sobic008G146700 Sobic005G171100--Sobic008G146700 Sobic010G045000 Sobic010G045000 Sobic005G171100--Sobic010G045000 Sobic003G291700 Sobic003G291700 Sobic005G171100--Sobic003G291700 Sobic006G246200 Sobic006G246200 Sobic005G171100--Sobic006G246200 Sobic005G171100--Sobic006G231600 Sobic002G209100 Sobic002G209100 Sobic005G171100--Sobic002G209100 Sobic005G082700 Sobic005G082700 Sobic005G171100--Sobic005G082700 Sobic006G113900 Sobic006G113900 Sobic005G171100--Sobic006G113900 Sobic001G136300 Sobic001G136300 Sobic005G171100--Sobic001G136300 Sobic006G231600--Sobic005G171100 Sobic006G231600--Sobic003G291700 Sobic006G231600--Sobic006G246200 Sobic006G231600--Sobic001G136300 Sobic006G231600--Sobic001G319100 Sobic006G231600--Sobic001G146500 Sobic006G231600--Sobic002G209100 Sobic006G231600--Sobic010G155300 Sobic006G231600--Sobic005G082700 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic001G319100--Sobic006G246200 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic001G319100--Sobic006G190000 Sobic001G319100--Sobic001G381300 Sobic001G144400 Sobic001G144400 Sobic006G190000--Sobic001G144400 Sobic006G190000--Sobic009G067400 Sobic006G190000--Sobic001G381300 Sobic006G190000--Sobic001G319100 Sobic009G173900 Sobic009G173900 Sobic006G190000--Sobic009G173900 Sobic006G190000--Sobic004G101000 Sobic006G190000--Sobic010G018300 Sobic006G190000--Sobic001G146400 Sobic006G190000--Sobic009G216050 Sobic006G003700 Sobic006G003700 Sobic004G158050--Sobic006G003700 Sobic004G158050--Sobic001G381300 Sobic005G193600 Sobic005G193600 Sobic004G158050--Sobic005G193600 Sobic002G195300 Sobic002G195300 Sobic004G158050--Sobic002G195300 Sobic006G229500 Sobic006G229500 Sobic004G158050--Sobic006G229500 Sobic001G339300 Sobic001G339300 Sobic004G158050--Sobic001G339300 Sobic007G129201 Sobic007G129201 Sobic004G158050--Sobic007G129201 Sobic007G037800 Sobic007G037800 Sobic004G158050--Sobic007G037800 Sobic002G169200 Sobic002G169200 Sobic004G158050--Sobic002G169200 Sobic001G075000 Sobic001G075000 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic004G195800 Sobic004G195800 Sobic008G142100--Sobic004G195800 Sobic002G257100 Sobic002G257100 Sobic008G142100--Sobic002G257100 Sobic008G142100--Sobic001G381300 Sobic001G339600 Sobic001G339600 Sobic008G142100--Sobic001G339600 Sobic003G339900 Sobic003G339900 Sobic008G142100--Sobic003G339900 Sobic005G226100 Sobic005G226100 Sobic001G381300--Sobic005G226100 Sobic001G381300--Sobic005G193600 Sobic008G181801 Sobic008G181801 Sobic001G381300--Sobic008G181801 Sobic001G381300--Sobic006G246200 Sobic001G381300--Sobic001G146500 Sobic009G241500 Sobic009G241500 Sobic001G381300--Sobic009G241500 Sobic001G381300--Sobic009G121600 Sobic003G037100 Sobic003G037100 Sobic001G381300--Sobic003G037100 Sobic001G381300--Sobic006G229500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.