Gene annotation
Transcriptome id Sobic.001G319100.1
Synonym GST29, GSTU18, Sb01g031000, ATGSTU18
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glutathione S-transferase, putative, expressed
UniProt C5WUJ8
Pfam PF13410 PF02798
Panther DB PTHR11260 PTHR11260:SF271
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10360 : glutathione S-transferase TAU 18
RAP-DB (Rice) LOC_Os10g38160.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ97554
Barley HORVU7Hr1G008890.1
Wheat TraesCS5A02G021700 , TraesCS1B02G194400 , TraesCS5D02G027500 , TraesCS1D02G190000 , TraesCS5B02G018400 , TraesCS5D02G027300
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G319100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
2 Sobic.009G216050 - -
3 Sobic.006G246200 protein kinase, putative, expressed -
4 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
5 Sobic.008G142100 No apical meristem protein, putative, expressed -
6 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
9 Sobic.001G381300 WRKY79, expressed -
10 Sobic.001G136300 nodulin family protein, putative, expressed -
11 Sobic.010G018300 expressed protein -
12 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
13 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -
15 Sobic.005G171100 - -
16 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
17 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
18 Sobic.003G296300 WRKY13, expressed -
19 Sobic.002G067000 ATPase, putative, expressed -
20 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3


Gene co-expression network
sample Sobic001G319100 Sobic001G319100 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic006G246200 Sobic006G246200 Sobic001G319100--Sobic006G246200 Sobic005G082700 Sobic005G082700 Sobic001G319100--Sobic005G082700 Sobic008G142100 Sobic008G142100 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G381300 Sobic001G381300 Sobic001G319100--Sobic001G381300 Sobic005G226100 Sobic005G226100 Sobic009G121600--Sobic005G226100 Sobic009G121600--Sobic006G246200 Sobic003G037100 Sobic003G037100 Sobic009G121600--Sobic003G037100 Sobic009G121600--Sobic001G381300 Sobic001G362001 Sobic001G362001 Sobic009G121600--Sobic001G362001 Sobic010G018300 Sobic010G018300 Sobic009G121600--Sobic010G018300 Sobic009G121600--Sobic005G082700 Sobic009G241500 Sobic009G241500 Sobic009G121600--Sobic009G241500 Sobic009G121600--Sobic009G216050 Sobic004G209500 Sobic004G209500 Sobic009G216050--Sobic004G209500 Sobic006G045000 Sobic006G045000 Sobic009G216050--Sobic006G045000 Sobic009G216050--Sobic009G067400 Sobic009G216050--Sobic004G101000 Sobic004G217700 Sobic004G217700 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic002G407200 Sobic002G407200 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic006G246200--Sobic009G241500 Sobic001G136300 Sobic001G136300 Sobic006G246200--Sobic001G136300 Sobic006G246200--Sobic005G082700 Sobic006G246200--Sobic001G362001 Sobic006G168000 Sobic006G168000 Sobic006G246200--Sobic006G168000 Sobic004G181200 Sobic004G181200 Sobic006G246200--Sobic004G181200 Sobic006G246200--Sobic009G121600 Sobic006G246200--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic006G246200--Sobic002G241250 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic005G082700--Sobic008G181801 Sobic005G082700--Sobic001G136300 Sobic005G082700--Sobic005G226100 Sobic005G133166 Sobic005G133166 Sobic005G082700--Sobic005G133166 Sobic004G052500 Sobic004G052500 Sobic005G082700--Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic005G082700--Sobic008G183300 Sobic005G082700--Sobic003G037100 Sobic001G075000 Sobic001G075000 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic002G209100 Sobic002G209100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic004G195800 Sobic004G195800 Sobic008G142100--Sobic004G195800 Sobic002G257100 Sobic002G257100 Sobic008G142100--Sobic002G257100 Sobic008G142100--Sobic001G381300 Sobic001G339600 Sobic001G339600 Sobic008G142100--Sobic001G339600 Sobic003G339900 Sobic003G339900 Sobic008G142100--Sobic003G339900 Sobic001G345400 Sobic001G345400 Sobic004G101000--Sobic001G345400 Sobic004G101000--Sobic009G216050 Sobic003G296300 Sobic003G296300 Sobic004G101000--Sobic003G296300 Sobic009G038000 Sobic009G038000 Sobic004G101000--Sobic009G038000 Sobic004G101000--Sobic002G407200 Sobic010G214200 Sobic010G214200 Sobic004G101000--Sobic010G214200 Sobic001G314800 Sobic001G314800 Sobic004G101000--Sobic001G314800 Sobic001G195100 Sobic001G195100 Sobic004G101000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic004G101000--Sobic003G310500 Sobic009G067400--Sobic010G018300 Sobic009G067400--Sobic009G216050 Sobic009G067400--Sobic001G381300 Sobic001G146400 Sobic001G146400 Sobic009G067400--Sobic001G146400 Sobic009G067400--Sobic004G209500 Sobic009G067400--Sobic009G121600 Sobic009G067400--Sobic005G226100 Sobic005G041000 Sobic005G041000 Sobic009G067400--Sobic005G041000 Sobic009G067400--Sobic002G407200 Sobic001G144400 Sobic001G144400 Sobic006G190000--Sobic001G144400 Sobic006G190000--Sobic009G067400 Sobic006G190000--Sobic001G381300 Sobic006G190000--Sobic001G319100 Sobic009G173900 Sobic009G173900 Sobic006G190000--Sobic009G173900 Sobic006G190000--Sobic004G101000 Sobic006G190000--Sobic010G018300 Sobic006G190000--Sobic001G146400 Sobic006G190000--Sobic009G216050 Sobic001G381300--Sobic005G226100 Sobic005G193600 Sobic005G193600 Sobic001G381300--Sobic005G193600 Sobic001G381300--Sobic008G181801 Sobic001G381300--Sobic006G246200 Sobic001G146500 Sobic001G146500 Sobic001G381300--Sobic001G146500 Sobic001G381300--Sobic009G241500 Sobic001G381300--Sobic009G121600 Sobic001G381300--Sobic003G037100 Sobic006G229500 Sobic006G229500 Sobic001G381300--Sobic006G229500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.