Gene annotation
Transcriptome id Sobic.001G075000.1
Synonym Sb01g006780, RLK
Functional annotation lectin-like receptor kinase, putative, expressed
UniProt C5WZ75
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF41
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os07g03830.1 : lectin-like receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a008358 , Zm00025a042251 , Zm00025a006799 , Zm00025a006801 , Zm00025a048486 , Zm00025a048485
Brachypodium KQK20380 , KQK20381 , KQJ96879 , PNT76834 , PNT76833 , KQK20379 , KQK12985
Barley HORVU2Hr1G091360.3 , HORVU2Hr1G091360.2 , HORVU2Hr1G091360.1 , HORVU1Hr1G037000.1 , HORVU1Hr1G037000.3 , HORVU1Hr1G037000.2 , HORVU1Hr1G037000.5 , HORVU1Hr1G037000.4 , HORVU5Hr1G104840.1 , HORVU5Hr1G104840.2 , HORVU5Hr1G098640.1 , HORVU5Hr1G098640.2
Wheat TraesCS5D02G416100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G142100 No apical meristem protein, putative, expressed -
2 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
3 Sobic.002G376000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
4 Sobic.003G296300 WRKY13, expressed -
5 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
8 Sobic.006G167800 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
9 Sobic.002G257100 regulatory protein, putative, expressed -
10 Sobic.005G000100 monoglyceride lipase, putative, expressed -
11 Sobic.004G258400 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
12 Sobic.005G093400 expressed protein -
13 Sobic.003G085700 expressed protein -
14 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
15 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
16 Sobic.003G098700 expressed protein -
17 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
18 Sobic.010G157500 zinc finger protein, putative, expressed -
19 Sobic.009G173900 expressed protein -
20 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -


Gene co-expression network
sample Sobic001G075000 Sobic001G075000 Sobic008G142100 Sobic008G142100 Sobic001G075000--Sobic008G142100 Sobic001G093900 Sobic001G093900 Sobic001G075000--Sobic001G093900 Sobic002G376000 Sobic002G376000 Sobic001G075000--Sobic002G376000 Sobic003G296300 Sobic003G296300 Sobic001G075000--Sobic003G296300 Sobic001G319100 Sobic001G319100 Sobic001G075000--Sobic001G319100 Sobic001G024500 Sobic001G024500 Sobic001G075000--Sobic001G024500 Sobic002G193400 Sobic002G193400 Sobic001G075000--Sobic002G193400 Sobic006G167800 Sobic006G167800 Sobic001G075000--Sobic006G167800 Sobic002G257100 Sobic002G257100 Sobic001G075000--Sobic002G257100 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic002G209100 Sobic002G209100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic004G195800 Sobic004G195800 Sobic008G142100--Sobic004G195800 Sobic008G142100--Sobic002G257100 Sobic001G381300 Sobic001G381300 Sobic008G142100--Sobic001G381300 Sobic001G339600 Sobic001G339600 Sobic008G142100--Sobic001G339600 Sobic003G339900 Sobic003G339900 Sobic008G142100--Sobic003G339900 Sobic001G093900--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G093900--Sobic001G530350 Sobic001G093900--Sobic001G024500 Sobic001G182600 Sobic001G182600 Sobic001G093900--Sobic001G182600 Sobic001G093900--Sobic006G167800 Sobic001G093900--Sobic002G376000 Sobic001G526000 Sobic001G526000 Sobic001G093900--Sobic001G526000 Sobic001G093900--Sobic001G075000 Sobic003G013600 Sobic003G013600 Sobic001G093900--Sobic003G013600 Sobic002G376000--Sobic006G167800 Sobic001G288100 Sobic001G288100 Sobic002G376000--Sobic001G288100 Sobic010G179800 Sobic010G179800 Sobic002G376000--Sobic010G179800 Sobic002G376000--Sobic001G526000 Sobic002G376000--Sobic001G093900 Sobic002G376000--Sobic001G024500 Sobic002G269400 Sobic002G269400 Sobic002G376000--Sobic002G269400 Sobic004G110400 Sobic004G110400 Sobic002G376000--Sobic004G110400 Sobic002G376000--Sobic001G075000 Sobic001G345400 Sobic001G345400 Sobic003G296300--Sobic001G345400 Sobic006G246100 Sobic006G246100 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic003G296300--Sobic006G167800 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic006G246200 Sobic006G246200 Sobic001G319100--Sobic006G246200 Sobic005G082700 Sobic005G082700 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G319100--Sobic001G381300 Sobic001G024500--Sobic001G093900 Sobic008G002700 Sobic008G002700 Sobic001G024500--Sobic008G002700 Sobic007G220700 Sobic007G220700 Sobic001G024500--Sobic007G220700 Sobic001G024500--Sobic002G376000 Sobic001G024500--Sobic010G179800 Sobic003G075000 Sobic003G075000 Sobic001G024500--Sobic003G075000 Sobic001G024500--Sobic001G075000 Sobic005G161100 Sobic005G161100 Sobic001G024500--Sobic005G161100 Sobic001G024500--Sobic001G182600 Sobic001G427500 Sobic001G427500 Sobic002G193400--Sobic001G427500 Sobic001G022600 Sobic001G022600 Sobic002G193400--Sobic001G022600 Sobic002G339500 Sobic002G339500 Sobic002G193400--Sobic002G339500 Sobic003G402200 Sobic003G402200 Sobic002G193400--Sobic003G402200 Sobic006G127400 Sobic006G127400 Sobic002G193400--Sobic006G127400 Sobic009G190800 Sobic009G190800 Sobic002G193400--Sobic009G190800 Sobic005G072200 Sobic005G072200 Sobic002G193400--Sobic005G072200 Sobic002G193400--Sobic001G075000 Sobic006G052200 Sobic006G052200 Sobic002G193400--Sobic006G052200 Sobic006G167800--Sobic001G526000 Sobic006G167800--Sobic003G296300 Sobic006G167800--Sobic004G110400 Sobic006G167800--Sobic002G376000 Sobic006G167800--Sobic010G157500 Sobic006G167800--Sobic001G093900 Sobic006G167800--Sobic009G067400 Sobic006G167800--Sobic001G195100 Sobic001G144400 Sobic001G144400 Sobic006G167800--Sobic001G144400 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic001G321600 Sobic001G321600 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic005G093300 Sobic005G093300 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.