Gene annotation
Transcriptome id Sobic.009G173900.1
Synonym Sb09g023460
Functional annotation expressed protein
UniProt C5YZS7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g40030.1 : expressed protein
MaizeGDB (Corn) Zm00025a043996
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G190000 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
2 Sobic.003G199600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
4 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
6 Sobic.010G102150 - -
7 Sobic.010G018300 expressed protein -
8 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
9 Sobic.001G381300 WRKY79, expressed -
10 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
11 Sobic.001G040400 EF hand family protein, putative, expressed -
12 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
13 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
16 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.002G067300 ATPase, putative, expressed -
18 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
19 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic009G173900 Sobic009G173900 Sobic006G190000 Sobic006G190000 Sobic009G173900--Sobic006G190000 Sobic003G199600 Sobic003G199600 Sobic009G173900--Sobic003G199600 Sobic007G115500 Sobic007G115500 Sobic009G173900--Sobic007G115500 Sobic001G146400 Sobic001G146400 Sobic009G173900--Sobic001G146400 Sobic006G113000 Sobic006G113000 Sobic009G173900--Sobic006G113000 Sobic010G102150 Sobic010G102150 Sobic009G173900--Sobic010G102150 Sobic010G018300 Sobic010G018300 Sobic009G173900--Sobic010G018300 Sobic010G224600 Sobic010G224600 Sobic009G173900--Sobic010G224600 Sobic001G381300 Sobic001G381300 Sobic009G173900--Sobic001G381300 Sobic001G144400 Sobic001G144400 Sobic006G190000--Sobic001G144400 Sobic009G067400 Sobic009G067400 Sobic006G190000--Sobic009G067400 Sobic006G190000--Sobic001G381300 Sobic001G319100 Sobic001G319100 Sobic006G190000--Sobic001G319100 Sobic006G190000--Sobic009G173900 Sobic004G101000 Sobic004G101000 Sobic006G190000--Sobic004G101000 Sobic006G190000--Sobic010G018300 Sobic006G190000--Sobic001G146400 Sobic009G216050 Sobic009G216050 Sobic006G190000--Sobic009G216050 Sobic003G199600--Sobic009G173900 Sobic003G199600--Sobic007G115500 Sobic005G080200 Sobic005G080200 Sobic003G199600--Sobic005G080200 Sobic003G199600--Sobic006G113000 Sobic002G067300 Sobic002G067300 Sobic003G199600--Sobic002G067300 Sobic003G417000 Sobic003G417000 Sobic003G199600--Sobic003G417000 Sobic001G040400 Sobic001G040400 Sobic003G199600--Sobic001G040400 Sobic001G319200 Sobic001G319200 Sobic003G199600--Sobic001G319200 Sobic004G010300 Sobic004G010300 Sobic003G199600--Sobic004G010300 Sobic003G228200 Sobic003G228200 Sobic007G115500--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G127100 Sobic007G127100 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic009G065300 Sobic009G065300 Sobic007G115500--Sobic009G065300 Sobic003G360200 Sobic003G360200 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic007G115500--Sobic005G080200 Sobic001G146400--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic001G146400--Sobic002G386200 Sobic002G199500 Sobic002G199500 Sobic001G146400--Sobic002G199500 Sobic004G169900 Sobic004G169900 Sobic001G146400--Sobic004G169900 Sobic001G146500 Sobic001G146500 Sobic001G146400--Sobic001G146500 Sobic001G146400--Sobic009G067400 Sobic001G146400--Sobic001G381300 Sobic010G163150 Sobic010G163150 Sobic001G146400--Sobic010G163150 Sobic009G121600 Sobic009G121600 Sobic001G146400--Sobic009G121600 Sobic010G192900 Sobic010G192900 Sobic006G113000--Sobic010G192900 Sobic006G009000 Sobic006G009000 Sobic006G113000--Sobic006G009000 Sobic006G113000--Sobic005G080200 Sobic001G195100 Sobic001G195100 Sobic006G113000--Sobic001G195100 Sobic004G114400 Sobic004G114400 Sobic006G113000--Sobic004G114400 Sobic006G246100 Sobic006G246100 Sobic006G113000--Sobic006G246100 Sobic010G099000 Sobic010G099000 Sobic006G113000--Sobic010G099000 Sobic006G113000--Sobic001G319200 Sobic006G113000--Sobic002G067300 Sobic010G163000 Sobic010G163000 Sobic010G102150--Sobic010G163000 Sobic001G059400 Sobic001G059400 Sobic010G102150--Sobic001G059400 Sobic010G102150--Sobic001G318200 Sobic001G454100 Sobic001G454100 Sobic010G102150--Sobic001G454100 Sobic010G102150--Sobic002G199500 Sobic010G102150--Sobic005G080200 Sobic007G090300 Sobic007G090300 Sobic010G102150--Sobic007G090300 Sobic004G297100 Sobic004G297100 Sobic010G102150--Sobic004G297100 Sobic002G377100 Sobic002G377100 Sobic010G102150--Sobic002G377100 Sobic010G018300--Sobic002G386200 Sobic010G018300--Sobic001G146400 Sobic010G018300--Sobic009G067400 Sobic010G018300--Sobic001G146500 Sobic001G259500 Sobic001G259500 Sobic010G018300--Sobic001G259500 Sobic010G224600--Sobic001G381300 Sobic004G209500 Sobic004G209500 Sobic010G224600--Sobic004G209500 Sobic010G224600--Sobic001G319100 Sobic010G224600--Sobic009G121600 Sobic010G224600--Sobic004G101000 Sobic005G226100 Sobic005G226100 Sobic010G224600--Sobic005G226100 Sobic005G082700 Sobic005G082700 Sobic010G224600--Sobic005G082700 Sobic002G216500 Sobic002G216500 Sobic010G224600--Sobic002G216500 Sobic010G224600--Sobic009G216050 Sobic001G381300--Sobic005G226100 Sobic005G193600 Sobic005G193600 Sobic001G381300--Sobic005G193600 Sobic008G181801 Sobic008G181801 Sobic001G381300--Sobic008G181801 Sobic006G246200 Sobic006G246200 Sobic001G381300--Sobic006G246200 Sobic001G381300--Sobic001G146500 Sobic009G241500 Sobic009G241500 Sobic001G381300--Sobic009G241500 Sobic001G381300--Sobic009G121600 Sobic003G037100 Sobic003G037100 Sobic001G381300--Sobic003G037100 Sobic006G229500 Sobic006G229500 Sobic001G381300--Sobic006G229500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.