Gene annotation
Transcriptome id Sobic.001G059400.1
Synonym Sb01g005400
Functional annotation acetyltransferase, GNAT family, putative, expressed
UniProt A0A1B6QHH9
Pfam PF13302
Panther DB PTHR13256 PTHR13256:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008080; N-acetyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G32030 : Acyl-CoA N-acyltransferases (NAT) superfamily protein
RAP-DB (Rice) LOC_Os03g58020.1 : acetyltransferase, GNAT family, putative, expressed
MaizeGDB (Corn) Zm00025a016586 , Zm00025a008539 , Zm00025a008540 , Zm00025a028596
Brachypodium KQK12768
Barley HORVU4Hr1G002710.1 , HORVU4Hr1G002710.2 , HORVU5Hr1G104800.1 , HORVU5Hr1G104800.2
Wheat TraesCS4D02G016500 , TraesCS5D02G441900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
2 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
3 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
4 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.010G102150 - -
6 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
8 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.008G188000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
10 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
11 Sobic.003G254900 no apical meristem protein, putative, expressed -
12 Sobic.005G109000 cytochrome P450, putative, expressed -
13 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
14 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
16 Sobic.003G193800 calmodulin-binding protein, putative, expressed -
17 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
19 Sobic.010G209100 WRKY28, expressed -
20 Sobic.010G071000 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic001G059400 Sobic001G059400 Sobic004G297100 Sobic004G297100 Sobic001G059400--Sobic004G297100 Sobic010G083600 Sobic010G083600 Sobic001G059400--Sobic010G083600 Sobic002G199500 Sobic002G199500 Sobic001G059400--Sobic002G199500 Sobic007G090300 Sobic007G090300 Sobic001G059400--Sobic007G090300 Sobic010G102150 Sobic010G102150 Sobic001G059400--Sobic010G102150 Sobic001G195100 Sobic001G195100 Sobic001G059400--Sobic001G195100 Sobic002G377100 Sobic002G377100 Sobic001G059400--Sobic002G377100 Sobic010G163000 Sobic010G163000 Sobic001G059400--Sobic010G163000 Sobic008G188000 Sobic008G188000 Sobic001G059400--Sobic008G188000 Sobic004G297100--Sobic001G059400 Sobic004G297100--Sobic001G195100 Sobic004G297100--Sobic002G199500 Sobic010G102000 Sobic010G102000 Sobic004G297100--Sobic010G102000 Sobic010G075600 Sobic010G075600 Sobic004G297100--Sobic010G075600 Sobic004G297100--Sobic007G090300 Sobic004G297100--Sobic008G188000 Sobic002G232800 Sobic002G232800 Sobic004G297100--Sobic002G232800 Sobic007G118301 Sobic007G118301 Sobic004G297100--Sobic007G118301 Sobic010G209100 Sobic010G209100 Sobic010G083600--Sobic010G209100 Sobic005G109000 Sobic005G109000 Sobic010G083600--Sobic005G109000 Sobic010G083600--Sobic001G059400 Sobic003G341100 Sobic003G341100 Sobic010G083600--Sobic003G341100 Sobic009G217500 Sobic009G217500 Sobic010G083600--Sobic009G217500 Sobic006G066200 Sobic006G066200 Sobic010G083600--Sobic006G066200 Sobic003G352400 Sobic003G352400 Sobic010G083600--Sobic003G352400 Sobic003G430400 Sobic003G430400 Sobic010G083600--Sobic003G430400 Sobic007G077100 Sobic007G077100 Sobic010G083600--Sobic007G077100 Sobic001G146400 Sobic001G146400 Sobic002G199500--Sobic001G146400 Sobic002G199500--Sobic001G059400 Sobic002G199500--Sobic007G090300 Sobic002G199500--Sobic004G297100 Sobic009G100500 Sobic009G100500 Sobic002G199500--Sobic009G100500 Sobic009G010400 Sobic009G010400 Sobic002G199500--Sobic009G010400 Sobic001G064900 Sobic001G064900 Sobic002G199500--Sobic001G064900 Sobic006G259000 Sobic006G259000 Sobic002G199500--Sobic006G259000 Sobic002G199500--Sobic010G102000 Sobic007G090300--Sobic009G100500 Sobic007G090300--Sobic006G259000 Sobic007G090300--Sobic002G199500 Sobic007G090300--Sobic001G059400 Sobic007G090300--Sobic010G102000 Sobic007G090300--Sobic003G352400 Sobic007G090300--Sobic002G232800 Sobic002G138700 Sobic002G138700 Sobic007G090300--Sobic002G138700 Sobic007G090300--Sobic003G341100 Sobic010G102150--Sobic010G163000 Sobic010G102150--Sobic001G059400 Sobic001G318200 Sobic001G318200 Sobic010G102150--Sobic001G318200 Sobic001G454100 Sobic001G454100 Sobic010G102150--Sobic001G454100 Sobic010G102150--Sobic002G199500 Sobic005G080200 Sobic005G080200 Sobic010G102150--Sobic005G080200 Sobic010G102150--Sobic007G090300 Sobic010G102150--Sobic004G297100 Sobic010G102150--Sobic002G377100 Sobic001G314800 Sobic001G314800 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic001G195100--Sobic004G297100 Sobic001G195100--Sobic001G059400 Sobic001G195100--Sobic007G118301 Sobic001G195100--Sobic007G090300 Sobic001G195100--Sobic005G109000 Sobic001G088300 Sobic001G088300 Sobic001G195100--Sobic001G088300 Sobic003G296300 Sobic003G296300 Sobic001G195100--Sobic003G296300 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic002G377100--Sobic001G059400 Sobic003G254900 Sobic003G254900 Sobic002G377100--Sobic003G254900 Sobic002G377100--Sobic003G102200 Sobic002G377100--Sobic001G195100 Sobic002G377100--Sobic010G163000 Sobic001G449700 Sobic001G449700 Sobic002G377100--Sobic001G449700 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400 Sobic010G163000--Sobic010G102150 Sobic005G229700 Sobic005G229700 Sobic010G163000--Sobic005G229700 Sobic010G163000--Sobic001G454100 Sobic003G146100 Sobic003G146100 Sobic010G163000--Sobic003G146100 Sobic010G107100 Sobic010G107100 Sobic010G163000--Sobic010G107100 Sobic001G399100 Sobic001G399100 Sobic010G163000--Sobic001G399100 Sobic010G163000--Sobic005G109000 Sobic010G163000--Sobic001G195100 Sobic004G158901 Sobic004G158901 Sobic010G163000--Sobic004G158901 Sobic008G188000--Sobic004G297100 Sobic008G188000--Sobic001G059400 Sobic003G277500 Sobic003G277500 Sobic008G188000--Sobic003G277500 Sobic004G101000 Sobic004G101000 Sobic008G188000--Sobic004G101000 Sobic006G265000 Sobic006G265000 Sobic008G188000--Sobic006G265000 Sobic004G140000 Sobic004G140000 Sobic008G188000--Sobic004G140000 Sobic008G188000--Sobic001G195100 Sobic008G188000--Sobic002G377100 Sobic004G195000 Sobic004G195000 Sobic008G188000--Sobic004G195000
Octagon: transcription factors


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