Gene annotation
Transcriptome id Sobic.008G188000.2,Sobic.008G188000.3
Synonym Sb08g022890
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
VQ domain containing protein, putative, expressed
UniProt A0A1Z5R7I7
Pfam PF05678
Panther DB PTHR34794
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22880 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os03g47280.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a004843
Brachypodium -
Barley HORVU5Hr1G010560.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
2 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
6 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
7 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
8 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
9 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
10 Sobic.009G038000 expressed protein -
11 Sobic.002G067000 ATPase, putative, expressed -
12 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
13 Sobic.003G296300 WRKY13, expressed -
14 Sobic.006G246100 one cut domain family member 3, putative, expressed -
15 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
17 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
18 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
19 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
20 Sobic.010G221032 - -


Gene co-expression network
sample Sobic008G188000 Sobic008G188000 Sobic004G297100 Sobic004G297100 Sobic008G188000--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic008G188000--Sobic001G059400 Sobic003G277500 Sobic003G277500 Sobic008G188000--Sobic003G277500 Sobic004G101000 Sobic004G101000 Sobic008G188000--Sobic004G101000 Sobic006G265000 Sobic006G265000 Sobic008G188000--Sobic006G265000 Sobic004G140000 Sobic004G140000 Sobic008G188000--Sobic004G140000 Sobic001G195100 Sobic001G195100 Sobic008G188000--Sobic001G195100 Sobic002G377100 Sobic002G377100 Sobic008G188000--Sobic002G377100 Sobic004G195000 Sobic004G195000 Sobic008G188000--Sobic004G195000 Sobic004G297100--Sobic001G059400 Sobic004G297100--Sobic001G195100 Sobic002G199500 Sobic002G199500 Sobic004G297100--Sobic002G199500 Sobic010G102000 Sobic010G102000 Sobic004G297100--Sobic010G102000 Sobic010G075600 Sobic010G075600 Sobic004G297100--Sobic010G075600 Sobic007G090300 Sobic007G090300 Sobic004G297100--Sobic007G090300 Sobic004G297100--Sobic008G188000 Sobic002G232800 Sobic002G232800 Sobic004G297100--Sobic002G232800 Sobic007G118301 Sobic007G118301 Sobic004G297100--Sobic007G118301 Sobic001G059400--Sobic004G297100 Sobic010G083600 Sobic010G083600 Sobic001G059400--Sobic010G083600 Sobic001G059400--Sobic002G199500 Sobic001G059400--Sobic007G090300 Sobic010G102150 Sobic010G102150 Sobic001G059400--Sobic010G102150 Sobic001G059400--Sobic001G195100 Sobic001G059400--Sobic002G377100 Sobic010G163000 Sobic010G163000 Sobic001G059400--Sobic010G163000 Sobic001G059400--Sobic008G188000 Sobic006G044932 Sobic006G044932 Sobic003G277500--Sobic006G044932 Sobic004G010300 Sobic004G010300 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic002G407700 Sobic002G407700 Sobic003G277500--Sobic002G407700 Sobic009G232266 Sobic009G232266 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic003G277500--Sobic004G195000 Sobic001G345400 Sobic001G345400 Sobic004G101000--Sobic001G345400 Sobic009G216050 Sobic009G216050 Sobic004G101000--Sobic009G216050 Sobic003G296300 Sobic003G296300 Sobic004G101000--Sobic003G296300 Sobic009G038000 Sobic009G038000 Sobic004G101000--Sobic009G038000 Sobic002G407200 Sobic002G407200 Sobic004G101000--Sobic002G407200 Sobic010G214200 Sobic010G214200 Sobic004G101000--Sobic010G214200 Sobic001G314800 Sobic001G314800 Sobic004G101000--Sobic001G314800 Sobic004G101000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic004G101000--Sobic003G310500 Sobic006G265000--Sobic001G314800 Sobic006G014700 Sobic006G014700 Sobic006G265000--Sobic006G014700 Sobic006G265000--Sobic010G214200 Sobic006G265000--Sobic004G101000 Sobic002G160600 Sobic002G160600 Sobic006G265000--Sobic002G160600 Sobic006G265000--Sobic003G310500 Sobic007G196600 Sobic007G196600 Sobic006G265000--Sobic007G196600 Sobic006G265000--Sobic004G140000 Sobic003G262100 Sobic003G262100 Sobic006G265000--Sobic003G262100 Sobic004G140000--Sobic009G038000 Sobic002G216500 Sobic002G216500 Sobic004G140000--Sobic002G216500 Sobic004G140000--Sobic002G160600 Sobic008G038100 Sobic008G038100 Sobic004G140000--Sobic008G038100 Sobic004G140000--Sobic001G314800 Sobic004G140000--Sobic003G310500 Sobic004G140000--Sobic010G214200 Sobic004G140000--Sobic006G265000 Sobic004G140000--Sobic004G101000 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic001G195100--Sobic004G297100 Sobic001G195100--Sobic001G059400 Sobic001G195100--Sobic007G118301 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G088300 Sobic001G088300 Sobic001G195100--Sobic001G088300 Sobic001G195100--Sobic003G296300 Sobic003G250600 Sobic003G250600 Sobic002G377100--Sobic003G250600 Sobic002G377100--Sobic001G059400 Sobic003G254900 Sobic003G254900 Sobic002G377100--Sobic003G254900 Sobic002G377100--Sobic003G102200 Sobic002G377100--Sobic001G195100 Sobic002G377100--Sobic010G163000 Sobic001G449700 Sobic001G449700 Sobic002G377100--Sobic001G449700 Sobic002G377100--Sobic004G297100 Sobic002G333400 Sobic002G333400 Sobic002G377100--Sobic002G333400 Sobic001G319200 Sobic001G319200 Sobic004G195000--Sobic001G319200 Sobic006G246100 Sobic006G246100 Sobic004G195000--Sobic006G246100 Sobic004G195000--Sobic003G277500 Sobic005G080200 Sobic005G080200 Sobic004G195000--Sobic005G080200 Sobic004G195000--Sobic003G296300 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic004G195000--Sobic002G377100 Sobic005G155600 Sobic005G155600 Sobic004G195000--Sobic005G155600
Octagon: transcription factors


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