Gene annotation
Transcriptome id Sobic.009G100500.2,Sobic.009G100500.1
Synonym ATWRKY33, Sb09g015900, WRKY33
Functional annotation WRKY53, expressed
UniProt A0A1B6P7L2 , A0A1B6P7P6
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF14
NCBI CDD -
KEGG Orthology K13424; WRKY transcription factor 33
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G38470 : WRKY DNA-binding protein 33
RAP-DB (Rice) LOC_Os05g27730.1 : WRKY53, expressed
MaizeGDB (Corn) Zm00025a039749 , Zm00025a037544 , Zm00025a043480 , Zm00025a043967
Brachypodium KQK13089 , KQK05779 , KQK10385 , KQJ85838 , KQK05780 , KQK05782 , KQK02240
Barley HORVU1Hr1G070250.10 , HORVU1Hr1G070250.1 , HORVU1Hr1G070250.3 , HORVU1Hr1G070250.2 , HORVU1Hr1G070250.5 , HORVU3Hr1G088200.3 , HORVU3Hr1G088200.2 , HORVU3Hr1G088200.1 , HORVU3Hr1G088200.7 , HORVU3Hr1G088200.6 , HORVU3Hr1G088200.5 , HORVU3Hr1G088200.4 , HORVU3Hr1G088200.9 , HORVU3Hr1G088200.8 , HORVU5Hr1G096800.4 , HORVU5Hr1G096800.5 , HORVU5Hr1G096800.6 , HORVU5Hr1G096800.1 , HORVU5Hr1G096800.3 , HORVU1Hr1G070250.4 , HORVU1Hr1G070250.7 , HORVU1Hr1G070250.6 , HORVU1Hr1G070250.9 , HORVU1Hr1G070250.8
Wheat TraesCS5B02G401800 , TraesCS4A02G162500 , TraesCS1B02G308200 , TraesCS3D02G341100 , TraesCS5D02G406500 , TraesCS3A02G347500 , TraesCS1D02G072900 , TraesCS1D02G072900 , TraesCS5A02G396800 , TraesCS1D02G292700 , TraesCS3B02G379200 , TraesCS3B02G379200 , TraesCS1B02G088900 , TraesCS1B02G088900 , TraesCS1A02G070400 , TraesCS1A02G070400 , TraesCS4B02G165900 , TraesCS4B02G165900 , TraesCS4D02G151700 , TraesCS1A02G298600
Populus -


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cDNA sequences
Sobic.009G100500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G193800 calmodulin-binding protein, putative, expressed -
2 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
3 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.010G221032 - -
5 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
6 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
8 Sobic.002G207300 tetraspanin family protein, putative, expressed -
9 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.007G201100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxysterol-binding protein, putative, expressed -
11 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
13 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
14 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
15 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
16 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
17 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
19 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
20 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33


Gene co-expression network
sample Sobic009G100500 Sobic009G100500 Sobic003G193800 Sobic003G193800 Sobic009G100500--Sobic003G193800 Sobic009G010400 Sobic009G010400 Sobic009G100500--Sobic009G010400 Sobic007G090300 Sobic007G090300 Sobic009G100500--Sobic007G090300 Sobic010G221032 Sobic010G221032 Sobic009G100500--Sobic010G221032 Sobic004G065900 Sobic004G065900 Sobic009G100500--Sobic004G065900 Sobic001G410100 Sobic001G410100 Sobic009G100500--Sobic001G410100 Sobic002G199500 Sobic002G199500 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic006G259000 Sobic006G259000 Sobic009G100500--Sobic006G259000 Sobic003G193800--Sobic009G100500 Sobic003G193800--Sobic009G010400 Sobic003G193800--Sobic006G259000 Sobic003G193800--Sobic004G065900 Sobic003G193800--Sobic007G090300 Sobic003G193800--Sobic001G410100 Sobic003G193800--Sobic010G221032 Sobic002G138700 Sobic002G138700 Sobic003G193800--Sobic002G138700 Sobic003G193800--Sobic002G199500 Sobic004G086800 Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic009G010400--Sobic004G065900 Sobic001G064900 Sobic001G064900 Sobic009G010400--Sobic001G064900 Sobic009G010400--Sobic009G100500 Sobic006G257700 Sobic006G257700 Sobic009G010400--Sobic006G257700 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic010G102000 Sobic010G102000 Sobic009G010400--Sobic010G102000 Sobic004G006500 Sobic004G006500 Sobic009G010400--Sobic004G006500 Sobic007G090300--Sobic009G100500 Sobic007G090300--Sobic006G259000 Sobic007G090300--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic007G090300--Sobic001G059400 Sobic007G090300--Sobic010G102000 Sobic003G352400 Sobic003G352400 Sobic007G090300--Sobic003G352400 Sobic002G232800 Sobic002G232800 Sobic007G090300--Sobic002G232800 Sobic007G090300--Sobic002G138700 Sobic003G341100 Sobic003G341100 Sobic007G090300--Sobic003G341100 Sobic010G221032--Sobic009G100500 Sobic010G221032--Sobic003G193800 Sobic010G221032--Sobic009G010400 Sobic001G450500 Sobic001G450500 Sobic010G221032--Sobic001G450500 Sobic010G221032--Sobic002G199500 Sobic001G526000 Sobic001G526000 Sobic010G221032--Sobic001G526000 Sobic010G221032--Sobic001G059400 Sobic002G067000 Sobic002G067000 Sobic010G221032--Sobic002G067000 Sobic004G297100 Sobic004G297100 Sobic010G221032--Sobic004G297100 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic002G367900 Sobic002G367900 Sobic004G065900--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic004G065900--Sobic001G118900 Sobic002G294600 Sobic002G294600 Sobic004G065900--Sobic002G294600 Sobic006G146500 Sobic006G146500 Sobic004G065900--Sobic006G146500 Sobic007G201100 Sobic007G201100 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic004G065900--Sobic009G010400 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic001G410100--Sobic002G207300 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic001G410100--Sobic009G100500 Sobic002G118600 Sobic002G118600 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic001G410100--Sobic004G065900 Sobic001G146400 Sobic001G146400 Sobic002G199500--Sobic001G146400 Sobic002G199500--Sobic001G059400 Sobic002G199500--Sobic007G090300 Sobic002G199500--Sobic004G297100 Sobic002G199500--Sobic009G100500 Sobic002G199500--Sobic009G010400 Sobic002G199500--Sobic001G064900 Sobic002G199500--Sobic006G259000 Sobic002G199500--Sobic010G102000 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic002G207300--Sobic007G201100 Sobic002G207300--Sobic006G146500 Sobic002G207300--Sobic001G118900 Sobic003G425200 Sobic003G425200 Sobic002G207300--Sobic003G425200 Sobic002G207300--Sobic002G294600 Sobic002G207300--Sobic001G410100 Sobic002G207300--Sobic001G095700 Sobic003G416500 Sobic003G416500 Sobic006G259000--Sobic003G416500 Sobic002G323900 Sobic002G323900 Sobic006G259000--Sobic002G323900 Sobic010G023200 Sobic010G023200 Sobic006G259000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic006G259000--Sobic007G077100 Sobic010G105300 Sobic010G105300 Sobic006G259000--Sobic010G105300 Sobic006G259000--Sobic001G064900 Sobic001G489500 Sobic001G489500 Sobic006G259000--Sobic001G489500 Sobic006G259000--Sobic004G086800 Sobic009G217500 Sobic009G217500 Sobic006G259000--Sobic009G217500
Octagon: transcription factors


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