Gene annotation
Transcriptome id Sobic.007G201100.3,Sobic.007G201100.1,Sobic.007G201100.2
Synonym Sb07g026870, ORP4C
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
oxysterol-binding protein, putative, expressed
UniProt A0A1Z5RBC5 , A0A1B6PIU1 , C5YI95
Pfam PF01237
Panther DB PTHR10972
NCBI CDD KOG2210; Oxysterol-binding protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57240 : OSBP(oxysterol binding protein)-related protein 4C
RAP-DB (Rice) LOC_Os08g40590.2 : oxysterol-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a030354 , Zm00025a005174
Brachypodium -
Barley HORVU7Hr1G052500.13 , HORVU7Hr1G052500.12 , HORVU7Hr1G052500.11 , HORVU7Hr1G052500.10 , HORVU7Hr1G052500.14 , HORVU7Hr1G052500.9 , HORVU7Hr1G052500.8 , HORVU7Hr1G052500.3 , HORVU7Hr1G052500.2 , HORVU7Hr1G052500.1 , HORVU7Hr1G052500.7 , HORVU7Hr1G052500.6 , HORVU7Hr1G052500.5 , HORVU7Hr1G052500.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G207300 tetraspanin family protein, putative, expressed -
2 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
3 Sobic.003G425200 Calmodulin-like protein 1(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
4 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
5 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
8 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
9 Sobic.007G145700 expressed protein -
10 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G370600 expressed protein -
13 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
14 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
15 Sobic.003G416500 SRC2 protein, putative, expressed -
16 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
17 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
19 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
20 Sobic.010G102000 U-box protein CMPG1, putative, expressed -


Gene co-expression network
sample Sobic007G201100 Sobic007G201100 Sobic002G207300 Sobic002G207300 Sobic007G201100--Sobic002G207300 Sobic004G065900 Sobic004G065900 Sobic007G201100--Sobic004G065900 Sobic003G425200 Sobic003G425200 Sobic007G201100--Sobic003G425200 Sobic003G341100 Sobic003G341100 Sobic007G201100--Sobic003G341100 Sobic007G077100 Sobic007G077100 Sobic007G201100--Sobic007G077100 Sobic009G217500 Sobic009G217500 Sobic007G201100--Sobic009G217500 Sobic006G146500 Sobic006G146500 Sobic007G201100--Sobic006G146500 Sobic002G367900 Sobic002G367900 Sobic007G201100--Sobic002G367900 Sobic007G145700 Sobic007G145700 Sobic007G201100--Sobic007G145700 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic002G207300--Sobic007G201100 Sobic002G207300--Sobic006G146500 Sobic001G118900 Sobic001G118900 Sobic002G207300--Sobic001G118900 Sobic002G207300--Sobic003G425200 Sobic002G294600 Sobic002G294600 Sobic002G207300--Sobic002G294600 Sobic001G410100 Sobic001G410100 Sobic002G207300--Sobic001G410100 Sobic001G095700 Sobic001G095700 Sobic002G207300--Sobic001G095700 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic004G065900--Sobic006G146500 Sobic004G065900--Sobic007G201100 Sobic004G065900--Sobic007G145700 Sobic009G010400 Sobic009G010400 Sobic004G065900--Sobic009G010400 Sobic003G425200--Sobic006G146500 Sobic003G425200--Sobic003G341100 Sobic003G425200--Sobic007G201100 Sobic003G425200--Sobic002G207300 Sobic007G011000 Sobic007G011000 Sobic003G425200--Sobic007G011000 Sobic003G425200--Sobic004G065900 Sobic001G370600 Sobic001G370600 Sobic003G425200--Sobic001G370600 Sobic003G425200--Sobic007G145700 Sobic002G118600 Sobic002G118600 Sobic003G425200--Sobic002G118600 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic009G044400 Sobic009G044400 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic010G102000 Sobic010G102000 Sobic003G341100--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G341100--Sobic001G341600 Sobic006G273800 Sobic006G273800 Sobic003G341100--Sobic006G273800 Sobic010G023200 Sobic010G023200 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600 Sobic007G077100--Sobic010G023200 Sobic007G077100--Sobic009G217500 Sobic007G077100--Sobic006G273800 Sobic003G416500 Sobic003G416500 Sobic007G077100--Sobic003G416500 Sobic007G077100--Sobic003G341100 Sobic006G259000 Sobic006G259000 Sobic007G077100--Sobic006G259000 Sobic007G077200 Sobic007G077200 Sobic007G077100--Sobic007G077200 Sobic010G071000 Sobic010G071000 Sobic007G077100--Sobic010G071000 Sobic001G489500 Sobic001G489500 Sobic007G077100--Sobic001G489500 Sobic009G217500--Sobic006G273800 Sobic009G217500--Sobic007G077100 Sobic009G217500--Sobic003G341100 Sobic009G217500--Sobic010G023200 Sobic009G217500--Sobic010G102000 Sobic009G217500--Sobic003G416500 Sobic009G217500--Sobic001G341600 Sobic001G035000 Sobic001G035000 Sobic009G217500--Sobic001G035000 Sobic001G064900 Sobic001G064900 Sobic009G217500--Sobic001G064900 Sobic006G146500--Sobic003G425200 Sobic006G146500--Sobic004G065900 Sobic006G146500--Sobic007G145700 Sobic006G146500--Sobic003G341100 Sobic006G146500--Sobic002G207300 Sobic006G146500--Sobic002G294600 Sobic006G146500--Sobic007G201100 Sobic006G146500--Sobic002G367900 Sobic001G081600 Sobic001G081600 Sobic006G146500--Sobic001G081600 Sobic002G367900--Sobic002G207300 Sobic002G367900--Sobic004G065900 Sobic003G268900 Sobic003G268900 Sobic002G367900--Sobic003G268900 Sobic002G367900--Sobic001G095700 Sobic001G462800 Sobic001G462800 Sobic002G367900--Sobic001G462800 Sobic002G367900--Sobic002G294600 Sobic002G197600 Sobic002G197600 Sobic002G367900--Sobic002G197600 Sobic006G210300 Sobic006G210300 Sobic002G367900--Sobic006G210300 Sobic004G244100 Sobic004G244100 Sobic002G367900--Sobic004G244100 Sobic007G145700--Sobic003G341100 Sobic007G145700--Sobic002G294600 Sobic007G145700--Sobic010G102000 Sobic007G145700--Sobic001G462800 Sobic007G145700--Sobic006G146500 Sobic007G145700--Sobic009G217500 Sobic007G145700--Sobic001G095700 Sobic007G145700--Sobic009G044400 Sobic007G145700--Sobic006G273800
Octagon: transcription factors


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