Gene annotation
Transcriptome id Sobic.007G090300.1
Synonym Sb07g007850
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YJJ4
Pfam -
Panther DB PTHR34483 PTHR34483:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g15650.1 : expressed protein
MaizeGDB (Corn) Zm00025a047735
Brachypodium KQJ95806
Barley -
Wheat TraesCS2D02G089300
Populus -


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cDNA sequences
Sobic.007G090300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
2 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
3 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
4 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
5 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
6 Sobic.003G352400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
7 Sobic.002G232800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
8 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
9 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33
10 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
11 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.007G201100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxysterol-binding protein, putative, expressed -
13 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
15 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
16 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
17 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.005G109000 cytochrome P450, putative, expressed -
20 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G090300 Sobic007G090300 Sobic009G100500 Sobic009G100500 Sobic007G090300--Sobic009G100500 Sobic006G259000 Sobic006G259000 Sobic007G090300--Sobic006G259000 Sobic002G199500 Sobic002G199500 Sobic007G090300--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic007G090300--Sobic001G059400 Sobic010G102000 Sobic010G102000 Sobic007G090300--Sobic010G102000 Sobic003G352400 Sobic003G352400 Sobic007G090300--Sobic003G352400 Sobic002G232800 Sobic002G232800 Sobic007G090300--Sobic002G232800 Sobic002G138700 Sobic002G138700 Sobic007G090300--Sobic002G138700 Sobic003G341100 Sobic003G341100 Sobic007G090300--Sobic003G341100 Sobic003G193800 Sobic003G193800 Sobic009G100500--Sobic003G193800 Sobic009G010400 Sobic009G010400 Sobic009G100500--Sobic009G010400 Sobic009G100500--Sobic007G090300 Sobic010G221032 Sobic010G221032 Sobic009G100500--Sobic010G221032 Sobic004G065900 Sobic004G065900 Sobic009G100500--Sobic004G065900 Sobic001G410100 Sobic001G410100 Sobic009G100500--Sobic001G410100 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic009G100500--Sobic006G259000 Sobic003G416500 Sobic003G416500 Sobic006G259000--Sobic003G416500 Sobic002G323900 Sobic002G323900 Sobic006G259000--Sobic002G323900 Sobic010G023200 Sobic010G023200 Sobic006G259000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic006G259000--Sobic007G077100 Sobic010G105300 Sobic010G105300 Sobic006G259000--Sobic010G105300 Sobic001G064900 Sobic001G064900 Sobic006G259000--Sobic001G064900 Sobic001G489500 Sobic001G489500 Sobic006G259000--Sobic001G489500 Sobic004G086800 Sobic004G086800 Sobic006G259000--Sobic004G086800 Sobic009G217500 Sobic009G217500 Sobic006G259000--Sobic009G217500 Sobic001G146400 Sobic001G146400 Sobic002G199500--Sobic001G146400 Sobic002G199500--Sobic001G059400 Sobic002G199500--Sobic007G090300 Sobic004G297100 Sobic004G297100 Sobic002G199500--Sobic004G297100 Sobic002G199500--Sobic009G100500 Sobic002G199500--Sobic009G010400 Sobic002G199500--Sobic001G064900 Sobic002G199500--Sobic006G259000 Sobic002G199500--Sobic010G102000 Sobic001G059400--Sobic004G297100 Sobic010G083600 Sobic010G083600 Sobic001G059400--Sobic010G083600 Sobic001G059400--Sobic002G199500 Sobic001G059400--Sobic007G090300 Sobic010G102150 Sobic010G102150 Sobic001G059400--Sobic010G102150 Sobic001G195100 Sobic001G195100 Sobic001G059400--Sobic001G195100 Sobic002G377100 Sobic002G377100 Sobic001G059400--Sobic002G377100 Sobic010G163000 Sobic010G163000 Sobic001G059400--Sobic010G163000 Sobic008G188000 Sobic008G188000 Sobic001G059400--Sobic008G188000 Sobic010G102000--Sobic009G217500 Sobic010G102000--Sobic010G105300 Sobic010G102000--Sobic003G341100 Sobic010G102000--Sobic002G232800 Sobic010G102000--Sobic001G064900 Sobic007G145700 Sobic007G145700 Sobic010G102000--Sobic007G145700 Sobic010G102000--Sobic010G023200 Sobic010G102000--Sobic007G077100 Sobic006G273800 Sobic006G273800 Sobic010G102000--Sobic006G273800 Sobic003G352400--Sobic003G341100 Sobic002G118600 Sobic002G118600 Sobic003G352400--Sobic002G118600 Sobic003G352400--Sobic010G083600 Sobic003G352400--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic003G352400--Sobic005G109000 Sobic003G352400--Sobic010G102000 Sobic001G341600 Sobic001G341600 Sobic003G352400--Sobic001G341600 Sobic003G352400--Sobic007G145700 Sobic002G374100 Sobic002G374100 Sobic003G352400--Sobic002G374100 Sobic002G232800--Sobic010G102000 Sobic002G232800--Sobic003G341100 Sobic002G232800--Sobic009G217500 Sobic002G232800--Sobic001G341600 Sobic002G232800--Sobic007G077100 Sobic002G232800--Sobic010G023200 Sobic010G071000 Sobic010G071000 Sobic002G232800--Sobic010G071000 Sobic010G209100 Sobic010G209100 Sobic002G232800--Sobic010G209100 Sobic002G232800--Sobic007G090300 Sobic002G138700--Sobic006G259000 Sobic001G084000 Sobic001G084000 Sobic002G138700--Sobic001G084000 Sobic002G138700--Sobic007G090300 Sobic002G138700--Sobic004G086800 Sobic002G138700--Sobic010G102000 Sobic002G138700--Sobic001G195100 Sobic002G138700--Sobic003G416500 Sobic002G138700--Sobic009G010400 Sobic001G287600 Sobic001G287600 Sobic002G138700--Sobic001G287600 Sobic003G341100--Sobic009G217500 Sobic003G341100--Sobic007G145700 Sobic009G044400 Sobic009G044400 Sobic003G341100--Sobic009G044400 Sobic003G341100--Sobic007G077100 Sobic003G341100--Sobic010G102000 Sobic003G341100--Sobic001G341600 Sobic003G341100--Sobic006G273800 Sobic003G341100--Sobic010G023200 Sobic003G341100--Sobic002G118600
Octagon: transcription factors


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