Gene annotation
Transcriptome id Sobic.003G193800.1
Synonym Sb03g025730
Functional annotation calmodulin-binding protein, putative, expressed
UniProt C5XNR6
Pfam -
Panther DB PTHR31250 PTHR31250:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33050 : calmodulin-binding family protein
RAP-DB (Rice) LOC_Os01g38980.2 : calmodulin-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a048872 , Zm00025a028439 , Zm00025a036808 , Zm00025a038407
Brachypodium -
Barley -
Wheat TraesCS3A02G206400
Populus -


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cDNA sequences
Sobic.003G193800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
2 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
3 Sobic.006G259000 AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
5 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
7 Sobic.010G221032 - -
8 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
9 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
10 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.001G059400 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
13 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
14 Sobic.004G297100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
15 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
16 Sobic.007G201100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxysterol-binding protein, putative, expressed -
17 Sobic.004G169900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@U-box domain containing protein, expressed -
18 Sobic.004G114500 DNA binding protein, putative, expressed -
19 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
20 Sobic.002G207300 tetraspanin family protein, putative, expressed -


Gene co-expression network
sample Sobic003G193800 Sobic003G193800 Sobic009G100500 Sobic009G100500 Sobic003G193800--Sobic009G100500 Sobic009G010400 Sobic009G010400 Sobic003G193800--Sobic009G010400 Sobic006G259000 Sobic006G259000 Sobic003G193800--Sobic006G259000 Sobic004G065900 Sobic004G065900 Sobic003G193800--Sobic004G065900 Sobic007G090300 Sobic007G090300 Sobic003G193800--Sobic007G090300 Sobic001G410100 Sobic001G410100 Sobic003G193800--Sobic001G410100 Sobic010G221032 Sobic010G221032 Sobic003G193800--Sobic010G221032 Sobic002G138700 Sobic002G138700 Sobic003G193800--Sobic002G138700 Sobic002G199500 Sobic002G199500 Sobic003G193800--Sobic002G199500 Sobic009G100500--Sobic003G193800 Sobic009G100500--Sobic009G010400 Sobic009G100500--Sobic007G090300 Sobic009G100500--Sobic010G221032 Sobic009G100500--Sobic004G065900 Sobic009G100500--Sobic001G410100 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic009G100500--Sobic006G259000 Sobic004G086800 Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic009G010400--Sobic004G065900 Sobic001G064900 Sobic001G064900 Sobic009G010400--Sobic001G064900 Sobic009G010400--Sobic009G100500 Sobic006G257700 Sobic006G257700 Sobic009G010400--Sobic006G257700 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic010G102000 Sobic010G102000 Sobic009G010400--Sobic010G102000 Sobic004G006500 Sobic004G006500 Sobic009G010400--Sobic004G006500 Sobic003G416500 Sobic003G416500 Sobic006G259000--Sobic003G416500 Sobic002G323900 Sobic002G323900 Sobic006G259000--Sobic002G323900 Sobic010G023200 Sobic010G023200 Sobic006G259000--Sobic010G023200 Sobic007G077100 Sobic007G077100 Sobic006G259000--Sobic007G077100 Sobic010G105300 Sobic010G105300 Sobic006G259000--Sobic010G105300 Sobic006G259000--Sobic001G064900 Sobic001G489500 Sobic001G489500 Sobic006G259000--Sobic001G489500 Sobic006G259000--Sobic004G086800 Sobic009G217500 Sobic009G217500 Sobic006G259000--Sobic009G217500 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic002G367900 Sobic002G367900 Sobic004G065900--Sobic002G367900 Sobic001G118900 Sobic001G118900 Sobic004G065900--Sobic001G118900 Sobic002G294600 Sobic002G294600 Sobic004G065900--Sobic002G294600 Sobic006G146500 Sobic006G146500 Sobic004G065900--Sobic006G146500 Sobic007G201100 Sobic007G201100 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic004G065900--Sobic009G010400 Sobic007G090300--Sobic009G100500 Sobic007G090300--Sobic006G259000 Sobic007G090300--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic007G090300--Sobic001G059400 Sobic007G090300--Sobic010G102000 Sobic003G352400 Sobic003G352400 Sobic007G090300--Sobic003G352400 Sobic002G232800 Sobic002G232800 Sobic007G090300--Sobic002G232800 Sobic007G090300--Sobic002G138700 Sobic003G341100 Sobic003G341100 Sobic007G090300--Sobic003G341100 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic001G410100--Sobic002G207300 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic001G410100--Sobic009G100500 Sobic002G118600 Sobic002G118600 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic001G410100--Sobic004G065900 Sobic010G221032--Sobic009G100500 Sobic010G221032--Sobic003G193800 Sobic010G221032--Sobic009G010400 Sobic001G450500 Sobic001G450500 Sobic010G221032--Sobic001G450500 Sobic010G221032--Sobic002G199500 Sobic001G526000 Sobic001G526000 Sobic010G221032--Sobic001G526000 Sobic010G221032--Sobic001G059400 Sobic002G067000 Sobic002G067000 Sobic010G221032--Sobic002G067000 Sobic004G297100 Sobic004G297100 Sobic010G221032--Sobic004G297100 Sobic002G138700--Sobic006G259000 Sobic001G084000 Sobic001G084000 Sobic002G138700--Sobic001G084000 Sobic002G138700--Sobic007G090300 Sobic002G138700--Sobic004G086800 Sobic002G138700--Sobic010G102000 Sobic001G195100 Sobic001G195100 Sobic002G138700--Sobic001G195100 Sobic002G138700--Sobic003G416500 Sobic002G138700--Sobic009G010400 Sobic002G138700--Sobic001G287600 Sobic001G146400 Sobic001G146400 Sobic002G199500--Sobic001G146400 Sobic002G199500--Sobic001G059400 Sobic002G199500--Sobic007G090300 Sobic002G199500--Sobic004G297100 Sobic002G199500--Sobic009G100500 Sobic002G199500--Sobic009G010400 Sobic002G199500--Sobic001G064900 Sobic002G199500--Sobic006G259000 Sobic002G199500--Sobic010G102000
Octagon: transcription factors


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