Gene annotation
Transcriptome id Sobic.004G114500.1
Synonym Sb04g009360
Functional annotation DNA binding protein, putative, expressed
UniProt A0A1Z5RMD9
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G68390 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os02g22160.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a034419 , Zm00025a019934
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G450500 STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
3 Sobic.003G193800 calmodulin-binding protein, putative, expressed -
4 Sobic.001G288100 zinc-binding protein, putative, expressed -
5 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
6 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
7 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
8 Sobic.010G018300 expressed protein -
9 Sobic.001G146400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
10 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
11 Sobic.003G376200 expressed protein -
12 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
13 Sobic.002G199500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CaM - probable calciumbinding protein CML45(PubMedID : 31721651)@EF hand family protein, putative, expressed K02183: calmodulin
14 Sobic.002G257100 regulatory protein, putative, expressed -
15 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
16 Sobic.001G381300 WRKY79, expressed -
17 Sobic.004G258400 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
18 Sobic.010G221032 - -
19 Sobic.002G209100 glutamate receptor, putative, expressed -
20 Sobic.006G113400 heavy metal associated domain containing protein, expressed -


Gene co-expression network
sample Sobic004G114500 Sobic004G114500 Sobic001G450500 Sobic001G450500 Sobic004G114500--Sobic001G450500 Sobic002G386200 Sobic002G386200 Sobic004G114500--Sobic002G386200 Sobic003G193800 Sobic003G193800 Sobic004G114500--Sobic003G193800 Sobic001G288100 Sobic001G288100 Sobic004G114500--Sobic001G288100 Sobic002G195800 Sobic002G195800 Sobic004G114500--Sobic002G195800 Sobic009G100500 Sobic009G100500 Sobic004G114500--Sobic009G100500 Sobic002G174300 Sobic002G174300 Sobic004G114500--Sobic002G174300 Sobic010G018300 Sobic010G018300 Sobic004G114500--Sobic010G018300 Sobic001G146400 Sobic001G146400 Sobic004G114500--Sobic001G146400 Sobic001G450500--Sobic002G174300 Sobic001G450500--Sobic001G288100 Sobic002G257100 Sobic002G257100 Sobic001G450500--Sobic002G257100 Sobic005G217700 Sobic005G217700 Sobic001G450500--Sobic005G217700 Sobic001G450500--Sobic002G386200 Sobic001G450500--Sobic004G114500 Sobic004G258400 Sobic004G258400 Sobic001G450500--Sobic004G258400 Sobic001G450500--Sobic002G195800 Sobic009G010400 Sobic009G010400 Sobic001G450500--Sobic009G010400 Sobic002G386200--Sobic010G018300 Sobic002G386200--Sobic001G146400 Sobic004G181200 Sobic004G181200 Sobic002G386200--Sobic004G181200 Sobic001G146500 Sobic001G146500 Sobic002G386200--Sobic001G146500 Sobic002G386200--Sobic002G174300 Sobic006G246200 Sobic006G246200 Sobic002G386200--Sobic006G246200 Sobic006G113400 Sobic006G113400 Sobic002G386200--Sobic006G113400 Sobic002G241250 Sobic002G241250 Sobic002G386200--Sobic002G241250 Sobic001G381300 Sobic001G381300 Sobic002G386200--Sobic001G381300 Sobic003G193800--Sobic009G100500 Sobic003G193800--Sobic009G010400 Sobic006G259000 Sobic006G259000 Sobic003G193800--Sobic006G259000 Sobic004G065900 Sobic004G065900 Sobic003G193800--Sobic004G065900 Sobic007G090300 Sobic007G090300 Sobic003G193800--Sobic007G090300 Sobic001G410100 Sobic001G410100 Sobic003G193800--Sobic001G410100 Sobic010G221032 Sobic010G221032 Sobic003G193800--Sobic010G221032 Sobic002G138700 Sobic002G138700 Sobic003G193800--Sobic002G138700 Sobic002G199500 Sobic002G199500 Sobic003G193800--Sobic002G199500 Sobic001G288100--Sobic001G450500 Sobic006G197800 Sobic006G197800 Sobic001G288100--Sobic006G197800 Sobic002G376000 Sobic002G376000 Sobic001G288100--Sobic002G376000 Sobic006G174600 Sobic006G174600 Sobic001G288100--Sobic006G174600 Sobic005G229400 Sobic005G229400 Sobic001G288100--Sobic005G229400 Sobic001G288100--Sobic004G114500 Sobic001G288100--Sobic009G100500 Sobic001G288100--Sobic002G257100 Sobic001G526000 Sobic001G526000 Sobic001G288100--Sobic001G526000 Sobic004G006500 Sobic004G006500 Sobic002G195800--Sobic004G006500 Sobic003G376200 Sobic003G376200 Sobic002G195800--Sobic003G376200 Sobic006G114200 Sobic006G114200 Sobic002G195800--Sobic006G114200 Sobic002G185200 Sobic002G185200 Sobic002G195800--Sobic002G185200 Sobic002G195800--Sobic001G450500 Sobic002G418900 Sobic002G418900 Sobic002G195800--Sobic002G418900 Sobic007G139900 Sobic007G139900 Sobic002G195800--Sobic007G139900 Sobic009G227800 Sobic009G227800 Sobic002G195800--Sobic009G227800 Sobic002G195800--Sobic004G114500 Sobic009G100500--Sobic003G193800 Sobic009G100500--Sobic009G010400 Sobic009G100500--Sobic007G090300 Sobic009G100500--Sobic010G221032 Sobic009G100500--Sobic004G065900 Sobic009G100500--Sobic001G410100 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic009G100500--Sobic006G259000 Sobic002G174300--Sobic001G450500 Sobic005G165900 Sobic005G165900 Sobic002G174300--Sobic005G165900 Sobic002G174300--Sobic002G386200 Sobic005G041000 Sobic005G041000 Sobic002G174300--Sobic005G041000 Sobic002G174300--Sobic004G181200 Sobic004G160300 Sobic004G160300 Sobic002G174300--Sobic004G160300 Sobic002G174300--Sobic009G010400 Sobic009G214300 Sobic009G214300 Sobic002G174300--Sobic009G214300 Sobic003G258700 Sobic003G258700 Sobic002G174300--Sobic003G258700 Sobic010G018300--Sobic002G386200 Sobic010G018300--Sobic001G146400 Sobic009G067400 Sobic009G067400 Sobic010G018300--Sobic009G067400 Sobic010G018300--Sobic001G146500 Sobic001G259500 Sobic001G259500 Sobic010G018300--Sobic001G259500 Sobic001G146400--Sobic010G018300 Sobic001G146400--Sobic002G386200 Sobic001G146400--Sobic002G199500 Sobic004G169900 Sobic004G169900 Sobic001G146400--Sobic004G169900 Sobic001G146400--Sobic001G146500 Sobic001G146400--Sobic009G067400 Sobic001G146400--Sobic001G381300 Sobic010G163150 Sobic010G163150 Sobic001G146400--Sobic010G163150 Sobic009G121600 Sobic009G121600 Sobic001G146400--Sobic009G121600
Octagon: transcription factors


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