Gene annotation
Transcriptome id Sobic.001G450500.1
Synonym Sb01g042350, ATMKK9, MKK9
Functional annotation STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt C5WSL9
Pfam PF07714
Panther DB PTHR24361 PTHR24361:SF325
NCBI CDD KOG0581; Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G73500 : MAP kinase kinase 9
RAP-DB (Rice) LOC_Os03g12390.1 : STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a001387 , Zm00025a053020
Brachypodium KQK22791
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
2 Sobic.001G288100 zinc-binding protein, putative, expressed -
3 Sobic.002G257100 regulatory protein, putative, expressed -
4 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -
5 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
6 Sobic.004G114500 DNA binding protein, putative, expressed -
7 Sobic.004G258400 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
8 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
10 Sobic.004G006500 expressed protein -
11 Sobic.004G160300 expressed protein -
12 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
13 Sobic.010G221032 - -
14 Sobic.003G193800 calmodulin-binding protein, putative, expressed -
15 Sobic.006G113400 heavy metal associated domain containing protein, expressed -
16 Sobic.001G363200 expressed protein -
17 Sobic.002G418900 expressed protein -
18 Sobic.003G376200 expressed protein -
19 Sobic.003G258700 expressed protein -
20 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G450500 Sobic001G450500 Sobic002G174300 Sobic002G174300 Sobic001G450500--Sobic002G174300 Sobic001G288100 Sobic001G288100 Sobic001G450500--Sobic001G288100 Sobic002G257100 Sobic002G257100 Sobic001G450500--Sobic002G257100 Sobic005G217700 Sobic005G217700 Sobic001G450500--Sobic005G217700 Sobic002G386200 Sobic002G386200 Sobic001G450500--Sobic002G386200 Sobic004G114500 Sobic004G114500 Sobic001G450500--Sobic004G114500 Sobic004G258400 Sobic004G258400 Sobic001G450500--Sobic004G258400 Sobic002G195800 Sobic002G195800 Sobic001G450500--Sobic002G195800 Sobic009G010400 Sobic009G010400 Sobic001G450500--Sobic009G010400 Sobic002G174300--Sobic001G450500 Sobic005G165900 Sobic005G165900 Sobic002G174300--Sobic005G165900 Sobic002G174300--Sobic002G386200 Sobic005G041000 Sobic005G041000 Sobic002G174300--Sobic005G041000 Sobic004G181200 Sobic004G181200 Sobic002G174300--Sobic004G181200 Sobic004G160300 Sobic004G160300 Sobic002G174300--Sobic004G160300 Sobic002G174300--Sobic009G010400 Sobic009G214300 Sobic009G214300 Sobic002G174300--Sobic009G214300 Sobic003G258700 Sobic003G258700 Sobic002G174300--Sobic003G258700 Sobic001G288100--Sobic001G450500 Sobic006G197800 Sobic006G197800 Sobic001G288100--Sobic006G197800 Sobic002G376000 Sobic002G376000 Sobic001G288100--Sobic002G376000 Sobic006G174600 Sobic006G174600 Sobic001G288100--Sobic006G174600 Sobic005G229400 Sobic005G229400 Sobic001G288100--Sobic005G229400 Sobic001G288100--Sobic004G114500 Sobic009G100500 Sobic009G100500 Sobic001G288100--Sobic009G100500 Sobic001G288100--Sobic002G257100 Sobic001G526000 Sobic001G526000 Sobic001G288100--Sobic001G526000 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic001G321600 Sobic001G321600 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic005G093300 Sobic005G093300 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900 Sobic002G337001 Sobic002G337001 Sobic005G217700--Sobic002G337001 Sobic005G217700--Sobic001G450500 Sobic009G037200 Sobic009G037200 Sobic005G217700--Sobic009G037200 Sobic005G217700--Sobic002G257100 Sobic003G421700 Sobic003G421700 Sobic005G217700--Sobic003G421700 Sobic003G088800 Sobic003G088800 Sobic005G217700--Sobic003G088800 Sobic005G217700--Sobic005G063900 Sobic005G055900 Sobic005G055900 Sobic005G217700--Sobic005G055900 Sobic006G113400 Sobic006G113400 Sobic005G217700--Sobic006G113400 Sobic010G018300 Sobic010G018300 Sobic002G386200--Sobic010G018300 Sobic001G146400 Sobic001G146400 Sobic002G386200--Sobic001G146400 Sobic002G386200--Sobic004G181200 Sobic001G146500 Sobic001G146500 Sobic002G386200--Sobic001G146500 Sobic002G386200--Sobic002G174300 Sobic006G246200 Sobic006G246200 Sobic002G386200--Sobic006G246200 Sobic002G386200--Sobic006G113400 Sobic002G241250 Sobic002G241250 Sobic002G386200--Sobic002G241250 Sobic001G381300 Sobic001G381300 Sobic002G386200--Sobic001G381300 Sobic004G114500--Sobic001G450500 Sobic004G114500--Sobic002G386200 Sobic003G193800 Sobic003G193800 Sobic004G114500--Sobic003G193800 Sobic004G114500--Sobic001G288100 Sobic004G114500--Sobic002G195800 Sobic004G114500--Sobic009G100500 Sobic004G114500--Sobic002G174300 Sobic004G114500--Sobic010G018300 Sobic004G114500--Sobic001G146400 Sobic004G258400--Sobic002G257100 Sobic008G142100 Sobic008G142100 Sobic004G258400--Sobic008G142100 Sobic001G136300 Sobic001G136300 Sobic004G258400--Sobic001G136300 Sobic004G258400--Sobic002G041800 Sobic004G258400--Sobic001G450500 Sobic004G258400--Sobic006G246200 Sobic004G258400--Sobic005G093300 Sobic001G362001 Sobic001G362001 Sobic004G258400--Sobic001G362001 Sobic004G258400--Sobic009G037200 Sobic004G006500 Sobic004G006500 Sobic002G195800--Sobic004G006500 Sobic003G376200 Sobic003G376200 Sobic002G195800--Sobic003G376200 Sobic006G114200 Sobic006G114200 Sobic002G195800--Sobic006G114200 Sobic002G185200 Sobic002G185200 Sobic002G195800--Sobic002G185200 Sobic002G195800--Sobic001G450500 Sobic002G418900 Sobic002G418900 Sobic002G195800--Sobic002G418900 Sobic007G139900 Sobic007G139900 Sobic002G195800--Sobic007G139900 Sobic009G227800 Sobic009G227800 Sobic002G195800--Sobic009G227800 Sobic002G195800--Sobic004G114500 Sobic004G086800 Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic004G065900 Sobic004G065900 Sobic009G010400--Sobic004G065900 Sobic001G064900 Sobic001G064900 Sobic009G010400--Sobic001G064900 Sobic009G010400--Sobic009G100500 Sobic006G257700 Sobic006G257700 Sobic009G010400--Sobic006G257700 Sobic006G259000 Sobic006G259000 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic010G102000 Sobic010G102000 Sobic009G010400--Sobic010G102000 Sobic009G010400--Sobic004G006500
Octagon: transcription factors


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