Gene annotation
Transcriptome id Sobic.001G288100.1
Synonym Sb01g028260
Functional annotation zinc-binding protein, putative, expressed
UniProt C5WRB5
Pfam PF04640
Panther DB PTHR31065:SF13 PTHR31065
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17900 : PLATZ transcription factor family protein
RAP-DB (Rice) LOC_Os10g42410.1 : zinc-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a051825 , Zm00025a003469 , Zm00025a005589
Brachypodium PNT65210 , KQJ99391 , KQJ97925
Barley HORVU7Hr1G059900.10 , HORVU7Hr1G059900.13 , HORVU1Hr1G050480.2 , HORVU1Hr1G050480.3 , HORVU1Hr1G050480.1 , HORVU1Hr1G050480.6 , HORVU1Hr1G050480.7 , HORVU1Hr1G050480.4 , HORVU1Hr1G050480.5
Wheat TraesCS7A02G281000 , TraesCS2D02G447400 , TraesCS1D02G196400 , TraesCS2B02G469000 , TraesCS1B02G207700 , TraesCS7B02G180100 , TraesCS7B02G180100 , TraesCS1A02G192800 , TraesCS2A02G448300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G450500 STE_MEK_ste7_MAP2K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.006G197800 zinc-binding protein, putative, expressed -
3 Sobic.002G376000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
4 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
5 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.004G114500 DNA binding protein, putative, expressed -
7 Sobic.009G100500 WRKY53, expressed K13424: WRKY transcription factor 33
8 Sobic.002G257100 regulatory protein, putative, expressed -
9 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
11 Sobic.003G193800 calmodulin-binding protein, putative, expressed -
12 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -
13 Sobic.001G387000 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
14 Sobic.010G221032 - -
15 Sobic.006G167800 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
16 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
17 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
18 Sobic.002G269400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@dehydration-responsive element-binding protein, putative, expressed -
19 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.001G285000 - -


Gene co-expression network
sample Sobic001G288100 Sobic001G288100 Sobic001G450500 Sobic001G450500 Sobic001G288100--Sobic001G450500 Sobic006G197800 Sobic006G197800 Sobic001G288100--Sobic006G197800 Sobic002G376000 Sobic002G376000 Sobic001G288100--Sobic002G376000 Sobic006G174600 Sobic006G174600 Sobic001G288100--Sobic006G174600 Sobic005G229400 Sobic005G229400 Sobic001G288100--Sobic005G229400 Sobic004G114500 Sobic004G114500 Sobic001G288100--Sobic004G114500 Sobic009G100500 Sobic009G100500 Sobic001G288100--Sobic009G100500 Sobic002G257100 Sobic002G257100 Sobic001G288100--Sobic002G257100 Sobic001G526000 Sobic001G526000 Sobic001G288100--Sobic001G526000 Sobic002G174300 Sobic002G174300 Sobic001G450500--Sobic002G174300 Sobic001G450500--Sobic001G288100 Sobic001G450500--Sobic002G257100 Sobic005G217700 Sobic005G217700 Sobic001G450500--Sobic005G217700 Sobic002G386200 Sobic002G386200 Sobic001G450500--Sobic002G386200 Sobic001G450500--Sobic004G114500 Sobic004G258400 Sobic004G258400 Sobic001G450500--Sobic004G258400 Sobic002G195800 Sobic002G195800 Sobic001G450500--Sobic002G195800 Sobic009G010400 Sobic009G010400 Sobic001G450500--Sobic009G010400 Sobic003G284300 Sobic003G284300 Sobic006G197800--Sobic003G284300 Sobic006G197800--Sobic001G288100 Sobic003G391100 Sobic003G391100 Sobic006G197800--Sobic003G391100 Sobic006G197800--Sobic002G257100 Sobic006G197800--Sobic002G376000 Sobic010G157500 Sobic010G157500 Sobic006G197800--Sobic010G157500 Sobic003G123300 Sobic003G123300 Sobic006G197800--Sobic003G123300 Sobic009G038200 Sobic009G038200 Sobic006G197800--Sobic009G038200 Sobic009G213400 Sobic009G213400 Sobic006G197800--Sobic009G213400 Sobic006G167800 Sobic006G167800 Sobic002G376000--Sobic006G167800 Sobic002G376000--Sobic001G288100 Sobic010G179800 Sobic010G179800 Sobic002G376000--Sobic010G179800 Sobic002G376000--Sobic001G526000 Sobic001G093900 Sobic001G093900 Sobic002G376000--Sobic001G093900 Sobic001G024500 Sobic001G024500 Sobic002G376000--Sobic001G024500 Sobic002G269400 Sobic002G269400 Sobic002G376000--Sobic002G269400 Sobic004G110400 Sobic004G110400 Sobic002G376000--Sobic004G110400 Sobic001G075000 Sobic001G075000 Sobic002G376000--Sobic001G075000 Sobic006G246200 Sobic006G246200 Sobic006G174600--Sobic006G246200 Sobic001G136300 Sobic001G136300 Sobic006G174600--Sobic001G136300 Sobic006G174600--Sobic001G288100 Sobic001G319100 Sobic001G319100 Sobic006G174600--Sobic001G319100 Sobic006G113400 Sobic006G113400 Sobic006G174600--Sobic006G113400 Sobic005G171100 Sobic005G171100 Sobic006G174600--Sobic005G171100 Sobic006G174600--Sobic004G258400 Sobic009G037200 Sobic009G037200 Sobic006G174600--Sobic009G037200 Sobic007G157100 Sobic007G157100 Sobic006G174600--Sobic007G157100 Sobic010G009400 Sobic010G009400 Sobic005G229400--Sobic010G009400 Sobic002G301800 Sobic002G301800 Sobic005G229400--Sobic002G301800 Sobic001G285000 Sobic001G285000 Sobic005G229400--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic005G229400--Sobic001G045000 Sobic009G156300 Sobic009G156300 Sobic005G229400--Sobic009G156300 Sobic004G227300 Sobic004G227300 Sobic005G229400--Sobic004G227300 Sobic005G229400--Sobic001G288100 Sobic005G229400--Sobic009G100500 Sobic001G162100 Sobic001G162100 Sobic005G229400--Sobic001G162100 Sobic004G114500--Sobic001G450500 Sobic004G114500--Sobic002G386200 Sobic003G193800 Sobic003G193800 Sobic004G114500--Sobic003G193800 Sobic004G114500--Sobic001G288100 Sobic004G114500--Sobic002G195800 Sobic004G114500--Sobic009G100500 Sobic004G114500--Sobic002G174300 Sobic010G018300 Sobic010G018300 Sobic004G114500--Sobic010G018300 Sobic001G146400 Sobic001G146400 Sobic004G114500--Sobic001G146400 Sobic009G100500--Sobic003G193800 Sobic009G100500--Sobic009G010400 Sobic007G090300 Sobic007G090300 Sobic009G100500--Sobic007G090300 Sobic010G221032 Sobic010G221032 Sobic009G100500--Sobic010G221032 Sobic004G065900 Sobic004G065900 Sobic009G100500--Sobic004G065900 Sobic001G410100 Sobic001G410100 Sobic009G100500--Sobic001G410100 Sobic002G199500 Sobic002G199500 Sobic009G100500--Sobic002G199500 Sobic002G207300 Sobic002G207300 Sobic009G100500--Sobic002G207300 Sobic006G259000 Sobic006G259000 Sobic009G100500--Sobic006G259000 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic001G321600 Sobic001G321600 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic005G093300 Sobic005G093300 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900 Sobic001G526000--Sobic006G167800 Sobic003G296300 Sobic003G296300 Sobic001G526000--Sobic003G296300 Sobic001G088300 Sobic001G088300 Sobic001G526000--Sobic001G088300 Sobic001G195100 Sobic001G195100 Sobic001G526000--Sobic001G195100 Sobic001G526000--Sobic009G100500 Sobic001G314800 Sobic001G314800 Sobic001G526000--Sobic001G314800 Sobic001G526000--Sobic006G259000 Sobic001G526000--Sobic007G090300 Sobic001G526000--Sobic004G110400
Octagon: transcription factors


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