Gene annotation
Transcriptome id Sobic.001G285000.1
Synonym IKU1, Sb01g027990
Functional annotation -
UniProt C5WQP7
Pfam PF05678
Panther DB PTHR33783 PTHR33783:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35230 : VQ motif-containing protein
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a003528
Brachypodium KQJ97957
Barley HORVU1Hr1G050850.1 , HORVU1Hr1G050850.3 , HORVU1Hr1G050850.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
2 Sobic.004G352900 expressed protein -
3 Sobic.010G066300 OsRCI2-8 - Putative low temperature and salt responsive protein, expressed -
4 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
5 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
7 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.003G296300 WRKY13, expressed -
9 Sobic.001G530350 - -
10 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
11 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
13 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
14 Sobic.006G044932 - -
15 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
16 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
17 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
18 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
19 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
20 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -


Gene co-expression network
sample Sobic001G285000 Sobic001G285000 Sobic009G156300 Sobic009G156300 Sobic001G285000--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic001G285000--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic001G285000--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G285000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G285000--Sobic005G229400 Sobic002G117200 Sobic002G117200 Sobic001G285000--Sobic002G117200 Sobic001G410100 Sobic001G410100 Sobic001G285000--Sobic001G410100 Sobic003G296300 Sobic003G296300 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic009G156300--Sobic001G285000 Sobic009G156300--Sobic010G066300 Sobic009G131100 Sobic009G131100 Sobic009G156300--Sobic009G131100 Sobic004G060600 Sobic004G060600 Sobic009G156300--Sobic004G060600 Sobic002G254650 Sobic002G254650 Sobic009G156300--Sobic002G254650 Sobic002G427900 Sobic002G427900 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic004G352900--Sobic002G427900 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic004G352900--Sobic010G066300 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic004G352900--Sobic009G131100 Sobic010G066300--Sobic002G427900 Sobic010G066300--Sobic004G352900 Sobic010G066300--Sobic009G156300 Sobic010G021100 Sobic010G021100 Sobic010G066300--Sobic010G021100 Sobic010G066300--Sobic001G285000 Sobic010G045833 Sobic010G045833 Sobic010G066300--Sobic010G045833 Sobic010G066300--Sobic002G254650 Sobic001G526900 Sobic001G526900 Sobic010G066300--Sobic001G526900 Sobic003G317200 Sobic003G317200 Sobic010G066300--Sobic003G317200 Sobic001G321500--Sobic004G352900 Sobic001G321500--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic001G321500--Sobic001G045000 Sobic006G138500 Sobic006G138500 Sobic001G321500--Sobic006G138500 Sobic006G047000 Sobic006G047000 Sobic001G321500--Sobic006G047000 Sobic006G044932 Sobic006G044932 Sobic001G321500--Sobic006G044932 Sobic004G173500 Sobic004G173500 Sobic001G321500--Sobic004G173500 Sobic001G343900 Sobic001G343900 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic010G009400 Sobic010G009400 Sobic005G229400--Sobic010G009400 Sobic002G301800 Sobic002G301800 Sobic005G229400--Sobic002G301800 Sobic005G229400--Sobic001G285000 Sobic005G229400--Sobic001G045000 Sobic005G229400--Sobic009G156300 Sobic004G227300 Sobic004G227300 Sobic005G229400--Sobic004G227300 Sobic001G288100 Sobic001G288100 Sobic005G229400--Sobic001G288100 Sobic009G100500 Sobic009G100500 Sobic005G229400--Sobic009G100500 Sobic001G162100 Sobic001G162100 Sobic005G229400--Sobic001G162100 Sobic002G117200--Sobic009G156300 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic002G117200--Sobic001G285000 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic001G022600 Sobic001G022600 Sobic002G117200--Sobic001G022600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic001G287600 Sobic001G287600 Sobic001G410100--Sobic001G287600 Sobic002G207300 Sobic002G207300 Sobic001G410100--Sobic002G207300 Sobic003G341100 Sobic003G341100 Sobic001G410100--Sobic003G341100 Sobic007G011000 Sobic007G011000 Sobic001G410100--Sobic007G011000 Sobic001G410100--Sobic009G100500 Sobic002G118600 Sobic002G118600 Sobic001G410100--Sobic002G118600 Sobic009G044400 Sobic009G044400 Sobic001G410100--Sobic009G044400 Sobic007G212200 Sobic007G212200 Sobic001G410100--Sobic007G212200 Sobic004G065900 Sobic004G065900 Sobic001G410100--Sobic004G065900 Sobic001G345400 Sobic001G345400 Sobic003G296300--Sobic001G345400 Sobic006G246100 Sobic006G246100 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic006G097800 Sobic006G097800 Sobic001G530350--Sobic006G097800 Sobic001G530350--Sobic001G526900 Sobic001G530350--Sobic003G296300 Sobic001G530350--Sobic001G093900 Sobic001G530350--Sobic001G345400 Sobic009G100800 Sobic009G100800 Sobic001G530350--Sobic009G100800 Sobic001G225600 Sobic001G225600 Sobic001G530350--Sobic001G225600 Sobic003G013600 Sobic003G013600 Sobic001G530350--Sobic003G013600 Sobic001G530350--Sobic006G246100
Octagon: transcription factors


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