Gene annotation
Transcriptome id Sobic.002G117200.3,Sobic.002G117200.2
Synonym Sb02g010000
Functional annotation B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed
UniProt C5X4F0
Pfam PF02214
Panther DB PTHR14499 PTHR14499:SF11
NCBI CDD KOG2714; SETA binding protein SB1 and related proteins, contain BTB/POZ domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41330 : BTB/POZ domain with WD40/YVTN repeat-like protein
RAP-DB (Rice) LOC_Os07g23720.1 : B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a034363 , Zm00025a045735
Brachypodium -
Barley HORVU7Hr1G038140.3 , HORVU7Hr1G038140.2 , HORVU7Hr1G038140.1 , HORVU7Hr1G038140.7 , HORVU7Hr1G038140.6 , HORVU7Hr1G038140.5 , HORVU7Hr1G038140.4
Wheat TraesCS7B02G090400 , TraesCS7D02G187700
Populus -


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cDNA sequences
Sobic.002G117200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
2 Sobic.004G352900 expressed protein -
3 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
4 Sobic.001G285000 - -
5 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
6 Sobic.002G123200 DNA directed RNA polymerase, 7 kDa subunit domain containing protein, expressed K03009: RPB12, DNA-directed RNA polymerases I, II, and III subunit RPABC4
7 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
8 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
9 Sobic.009G080200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
10 Sobic.010G066300 OsRCI2-8 - Putative low temperature and salt responsive protein, expressed -
11 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
12 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G298300 ubiquitin-related modifier 1, putative, expressed K12161: ubiquitin related modifier 1
14 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
15 Sobic.009G233700 CobW/P47K family protein, putative, expressed K03189: urease accessory protein
16 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
18 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
19 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
20 Sobic.005G000100 monoglyceride lipase, putative, expressed -


Gene co-expression network
sample Sobic002G117200 Sobic002G117200 Sobic009G156300 Sobic009G156300 Sobic002G117200--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic001G285000 Sobic001G285000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic001G022600 Sobic001G022600 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic009G156300--Sobic001G285000 Sobic010G066300 Sobic010G066300 Sobic009G156300--Sobic010G066300 Sobic009G156300--Sobic009G131100 Sobic009G156300--Sobic004G060600 Sobic002G254650 Sobic002G254650 Sobic009G156300--Sobic002G254650 Sobic002G427900 Sobic002G427900 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic004G352900--Sobic002G427900 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic004G352900--Sobic010G066300 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic004G352900--Sobic009G131100 Sobic001G129400 Sobic001G129400 Sobic003G003000--Sobic001G129400 Sobic001G132900 Sobic001G132900 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic001G285000--Sobic009G156300 Sobic001G285000--Sobic004G352900 Sobic001G285000--Sobic010G066300 Sobic001G321500 Sobic001G321500 Sobic001G285000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G285000--Sobic005G229400 Sobic001G285000--Sobic002G117200 Sobic001G410100 Sobic001G410100 Sobic001G285000--Sobic001G410100 Sobic003G296300 Sobic003G296300 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350 Sobic009G131100--Sobic001G536500 Sobic002G078400 Sobic002G078400 Sobic009G131100--Sobic002G078400 Sobic009G131100--Sobic004G060600 Sobic007G091000 Sobic007G091000 Sobic009G131100--Sobic007G091000 Sobic010G194900 Sobic010G194900 Sobic009G131100--Sobic010G194900 Sobic003G277000 Sobic003G277000 Sobic009G131100--Sobic003G277000 Sobic001G087900 Sobic001G087900 Sobic009G131100--Sobic001G087900 Sobic004G265700 Sobic004G265700 Sobic009G131100--Sobic004G265700 Sobic009G131100--Sobic006G281200 Sobic009G199700 Sobic009G199700 Sobic002G123200--Sobic009G199700 Sobic007G079700 Sobic007G079700 Sobic002G123200--Sobic007G079700 Sobic001G136900 Sobic001G136900 Sobic002G123200--Sobic001G136900 Sobic002G204000 Sobic002G204000 Sobic002G123200--Sobic002G204000 Sobic002G123200--Sobic002G117200 Sobic004G186000 Sobic004G186000 Sobic002G123200--Sobic004G186000 Sobic008G128600 Sobic008G128600 Sobic002G123200--Sobic008G128600 Sobic007G126200 Sobic007G126200 Sobic002G123200--Sobic007G126200 Sobic003G250500 Sobic003G250500 Sobic002G123200--Sobic003G250500 Sobic009G190800 Sobic009G190800 Sobic001G022600--Sobic009G190800 Sobic004G214100 Sobic004G214100 Sobic001G022600--Sobic004G214100 Sobic002G193400 Sobic002G193400 Sobic001G022600--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic001G022600--Sobic008G142600 Sobic001G022600--Sobic002G117200 Sobic001G427500 Sobic001G427500 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic003G359900 Sobic003G359900 Sobic001G022600--Sobic003G359900 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic003G013600 Sobic003G013600 Sobic009G080200--Sobic003G013600 Sobic009G080200--Sobic001G285000 Sobic009G080200--Sobic002G117200 Sobic004G275200 Sobic004G275200 Sobic009G080200--Sobic004G275200 Sobic009G080200--Sobic002G123200 Sobic009G080200--Sobic009G156300 Sobic003G123300 Sobic003G123300 Sobic009G080200--Sobic003G123300 Sobic001G078200 Sobic001G078200 Sobic009G080200--Sobic001G078200 Sobic002G194700 Sobic002G194700 Sobic009G080200--Sobic002G194700
Octagon: transcription factors


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