Gene annotation
Transcriptome id Sobic.004G309500.1
Synonym Sb04g034180
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XSV3
Pfam PF07939
Panther DB PTHR31865 PTHR31865:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33985 : Protein of unknown function (DUF1685)
RAP-DB (Rice) LOC_Os02g52770.1 : expressed protein
MaizeGDB (Corn) Zm00025a033095 , Zm00025a022223
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G309500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G000100 monoglyceride lipase, putative, expressed -
2 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
3 Sobic.004G352900 expressed protein -
4 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
5 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
6 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
7 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
8 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
9 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
10 Sobic.005G093400 expressed protein -
11 Sobic.007G079700 pentatricopeptide, putative, expressed -
12 Sobic.008G185900 RNA recognition motif containing protein, expressed -
13 Sobic.009G131100 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
14 Sobic.001G198200 CRP3 - Cysteine-rich family protein precursor, expressed -
15 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
16 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
17 Sobic.001G081400 ankyrin repeat domain containing protein, putative, expressed K18477: type IV protein arginine methyltransferase
18 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
19 Sobic.001G141300 RNA recognition motif containing protein, expressed -
20 Sobic.004G179700 expressed protein -


Gene co-expression network
sample Sobic004G309500 Sobic004G309500 Sobic005G000100 Sobic005G000100 Sobic004G309500--Sobic005G000100 Sobic002G117200 Sobic002G117200 Sobic004G309500--Sobic002G117200 Sobic004G352900 Sobic004G352900 Sobic004G309500--Sobic004G352900 Sobic003G401400 Sobic003G401400 Sobic004G309500--Sobic003G401400 Sobic009G156300 Sobic009G156300 Sobic004G309500--Sobic009G156300 Sobic001G321500 Sobic001G321500 Sobic004G309500--Sobic001G321500 Sobic001G202400 Sobic001G202400 Sobic004G309500--Sobic001G202400 Sobic004G014000 Sobic004G014000 Sobic004G309500--Sobic004G014000 Sobic001G022600 Sobic001G022600 Sobic004G309500--Sobic001G022600 Sobic004G010300 Sobic004G010300 Sobic005G000100--Sobic004G010300 Sobic009G024600 Sobic009G024600 Sobic005G000100--Sobic009G024600 Sobic005G093400 Sobic005G093400 Sobic005G000100--Sobic005G093400 Sobic005G000100--Sobic004G309500 Sobic001G087900 Sobic001G087900 Sobic005G000100--Sobic001G087900 Sobic001G075000 Sobic001G075000 Sobic005G000100--Sobic001G075000 Sobic004G114400 Sobic004G114400 Sobic005G000100--Sobic004G114400 Sobic010G122800 Sobic010G122800 Sobic005G000100--Sobic010G122800 Sobic005G000100--Sobic009G156300 Sobic002G117200--Sobic009G156300 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic001G285000 Sobic001G285000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic004G352900--Sobic009G156300 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic004G352900--Sobic009G131100 Sobic001G141300 Sobic001G141300 Sobic003G401400--Sobic001G141300 Sobic008G185900 Sobic008G185900 Sobic003G401400--Sobic008G185900 Sobic002G376400 Sobic002G376400 Sobic003G401400--Sobic002G376400 Sobic001G081400 Sobic001G081400 Sobic003G401400--Sobic001G081400 Sobic003G401400--Sobic004G309500 Sobic007G034400 Sobic007G034400 Sobic003G401400--Sobic007G034400 Sobic008G171800 Sobic008G171800 Sobic003G401400--Sobic008G171800 Sobic003G401400--Sobic001G202400 Sobic004G028400 Sobic004G028400 Sobic003G401400--Sobic004G028400 Sobic009G156300--Sobic002G117200 Sobic009G156300--Sobic004G352900 Sobic009G156300--Sobic001G285000 Sobic009G156300--Sobic010G066300 Sobic009G156300--Sobic009G131100 Sobic009G156300--Sobic004G060600 Sobic009G156300--Sobic002G254650 Sobic009G156300--Sobic002G427900 Sobic010G065400 Sobic010G065400 Sobic009G156300--Sobic010G065400 Sobic001G321500--Sobic004G352900 Sobic001G321500--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic001G321500--Sobic001G045000 Sobic006G138500 Sobic006G138500 Sobic001G321500--Sobic006G138500 Sobic006G047000 Sobic006G047000 Sobic001G321500--Sobic006G047000 Sobic006G044932 Sobic006G044932 Sobic001G321500--Sobic006G044932 Sobic004G173500 Sobic004G173500 Sobic001G321500--Sobic004G173500 Sobic001G343900 Sobic001G343900 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic003G015400 Sobic003G015400 Sobic001G202400--Sobic003G015400 Sobic001G202400--Sobic007G034400 Sobic008G103900 Sobic008G103900 Sobic001G202400--Sobic008G103900 Sobic001G543300 Sobic001G543300 Sobic001G202400--Sobic001G543300 Sobic001G202400--Sobic001G081400 Sobic009G207100 Sobic009G207100 Sobic001G202400--Sobic009G207100 Sobic002G007100 Sobic002G007100 Sobic001G202400--Sobic002G007100 Sobic003G182400 Sobic003G182400 Sobic001G202400--Sobic003G182400 Sobic009G168000 Sobic009G168000 Sobic001G202400--Sobic009G168000 Sobic004G014000--Sobic004G352900 Sobic003G116700 Sobic003G116700 Sobic004G014000--Sobic003G116700 Sobic009G249000 Sobic009G249000 Sobic004G014000--Sobic009G249000 Sobic004G172700 Sobic004G172700 Sobic004G014000--Sobic004G172700 Sobic010G194900 Sobic010G194900 Sobic004G014000--Sobic010G194900 Sobic008G097401 Sobic008G097401 Sobic004G014000--Sobic008G097401 Sobic004G014000--Sobic009G156300 Sobic005G228000 Sobic005G228000 Sobic004G014000--Sobic005G228000 Sobic001G294000 Sobic001G294000 Sobic004G014000--Sobic001G294000 Sobic009G190800 Sobic009G190800 Sobic001G022600--Sobic009G190800 Sobic004G214100 Sobic004G214100 Sobic001G022600--Sobic004G214100 Sobic002G193400 Sobic002G193400 Sobic001G022600--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic001G022600--Sobic008G142600 Sobic001G022600--Sobic002G117200 Sobic001G427500 Sobic001G427500 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic003G359900 Sobic003G359900 Sobic001G022600--Sobic003G359900
Octagon: transcription factors


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