Gene annotation
Transcriptome id Sobic.003G401400.1
Synonym GR-RBP2, ATGRP2, Sb03g043760, GRP2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
RNA recognition motif containing protein, putative, expressed
UniProt C5XG78
Pfam PF00076
Panther DB PTHR24012
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT4G13850 : glycine-rich RNA-binding protein 2
RAP-DB (Rice) LOC_Os01g68790.2 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039345
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G401400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G141300 RNA recognition motif containing protein, expressed -
2 Sobic.008G185900 RNA recognition motif containing protein, expressed -
3 Sobic.002G376400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G081400 ankyrin repeat domain containing protein, putative, expressed K18477: type IV protein arginine methyltransferase
5 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G034400 RNA recognition motif containing protein, putative, expressed -
7 Sobic.008G171800 WD domain, G-beta repeat domain containing protein, expressed K14830: MAK11, protein MAK11
8 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
9 Sobic.004G028400 SWIB/MDM2 domain containing protein, expressed -
10 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
11 Sobic.002G007100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
12 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
13 Sobic.005G164700 h/ACA ribonucleoprotein complex subunit 1-like protein 1, putative, expressed K11128: GAR1, H/ACA ribonucleoprotein complex subunit 1
14 Sobic.009G129500 cyclin, putative, expressed -
15 Sobic.002G338300 expressed protein -
16 Sobic.009G233700 CobW/P47K family protein, putative, expressed K03189: urease accessory protein
17 Sobic.003G310600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial glycoprotein, putative, expressed -
18 Sobic.002G353500 ruvB-like 2, putative, expressed K11338: RUVBL2, RVB2, RuvB-like protein 2
19 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
20 Sobic.003G183900 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic003G401400 Sobic003G401400 Sobic001G141300 Sobic001G141300 Sobic003G401400--Sobic001G141300 Sobic008G185900 Sobic008G185900 Sobic003G401400--Sobic008G185900 Sobic002G376400 Sobic002G376400 Sobic003G401400--Sobic002G376400 Sobic001G081400 Sobic001G081400 Sobic003G401400--Sobic001G081400 Sobic004G309500 Sobic004G309500 Sobic003G401400--Sobic004G309500 Sobic007G034400 Sobic007G034400 Sobic003G401400--Sobic007G034400 Sobic008G171800 Sobic008G171800 Sobic003G401400--Sobic008G171800 Sobic001G202400 Sobic001G202400 Sobic003G401400--Sobic001G202400 Sobic004G028400 Sobic004G028400 Sobic003G401400--Sobic004G028400 Sobic001G141300--Sobic008G185900 Sobic001G141300--Sobic003G401400 Sobic009G197000 Sobic009G197000 Sobic001G141300--Sobic009G197000 Sobic001G426400 Sobic001G426400 Sobic001G141300--Sobic001G426400 Sobic001G191200 Sobic001G191200 Sobic001G141300--Sobic001G191200 Sobic006G265400 Sobic006G265400 Sobic001G141300--Sobic006G265400 Sobic006G279800 Sobic006G279800 Sobic001G141300--Sobic006G279800 Sobic001G423100 Sobic001G423100 Sobic001G141300--Sobic001G423100 Sobic001G078200 Sobic001G078200 Sobic001G141300--Sobic001G078200 Sobic008G185900--Sobic001G141300 Sobic008G185900--Sobic003G401400 Sobic001G341300 Sobic001G341300 Sobic008G185900--Sobic001G341300 Sobic008G185900--Sobic002G376400 Sobic008G133500 Sobic008G133500 Sobic008G185900--Sobic008G133500 Sobic002G279100 Sobic002G279100 Sobic008G185900--Sobic002G279100 Sobic004G216700 Sobic004G216700 Sobic008G185900--Sobic004G216700 Sobic008G185900--Sobic008G171800 Sobic006G241200 Sobic006G241200 Sobic008G185900--Sobic006G241200 Sobic002G376400--Sobic001G341300 Sobic002G376400--Sobic004G216700 Sobic002G376400--Sobic003G401400 Sobic002G376400--Sobic008G185900 Sobic009G129500 Sobic009G129500 Sobic002G376400--Sobic009G129500 Sobic009G159700 Sobic009G159700 Sobic002G376400--Sobic009G159700 Sobic009G166801 Sobic009G166801 Sobic002G376400--Sobic009G166801 Sobic005G172300 Sobic005G172300 Sobic002G376400--Sobic005G172300 Sobic010G072300 Sobic010G072300 Sobic002G376400--Sobic010G072300 Sobic001G081400--Sobic007G034400 Sobic003G310600 Sobic003G310600 Sobic001G081400--Sobic003G310600 Sobic002G353500 Sobic002G353500 Sobic001G081400--Sobic002G353500 Sobic008G094600 Sobic008G094600 Sobic001G081400--Sobic008G094600 Sobic001G069400 Sobic001G069400 Sobic001G081400--Sobic001G069400 Sobic001G081400--Sobic001G202400 Sobic003G244300 Sobic003G244300 Sobic001G081400--Sobic003G244300 Sobic003G015400 Sobic003G015400 Sobic001G081400--Sobic003G015400 Sobic008G103900 Sobic008G103900 Sobic001G081400--Sobic008G103900 Sobic005G000100 Sobic005G000100 Sobic004G309500--Sobic005G000100 Sobic002G117200 Sobic002G117200 Sobic004G309500--Sobic002G117200 Sobic004G352900 Sobic004G352900 Sobic004G309500--Sobic004G352900 Sobic004G309500--Sobic003G401400 Sobic009G156300 Sobic009G156300 Sobic004G309500--Sobic009G156300 Sobic001G321500 Sobic001G321500 Sobic004G309500--Sobic001G321500 Sobic004G309500--Sobic001G202400 Sobic004G014000 Sobic004G014000 Sobic004G309500--Sobic004G014000 Sobic001G022600 Sobic001G022600 Sobic004G309500--Sobic001G022600 Sobic009G114400 Sobic009G114400 Sobic007G034400--Sobic009G114400 Sobic005G164700 Sobic005G164700 Sobic007G034400--Sobic005G164700 Sobic007G034400--Sobic008G103900 Sobic007G034400--Sobic003G015400 Sobic001G058900 Sobic001G058900 Sobic007G034400--Sobic001G058900 Sobic003G025200 Sobic003G025200 Sobic007G034400--Sobic003G025200 Sobic001G225700 Sobic001G225700 Sobic007G034400--Sobic001G225700 Sobic001G510800 Sobic001G510800 Sobic007G034400--Sobic001G510800 Sobic002G045100 Sobic002G045100 Sobic007G034400--Sobic002G045100 Sobic002G206500 Sobic002G206500 Sobic008G171800--Sobic002G206500 Sobic003G407600 Sobic003G407600 Sobic008G171800--Sobic003G407600 Sobic002G262100 Sobic002G262100 Sobic008G171800--Sobic002G262100 Sobic004G173100 Sobic004G173100 Sobic008G171800--Sobic004G173100 Sobic006G198600 Sobic006G198600 Sobic008G171800--Sobic006G198600 Sobic008G171800--Sobic008G185900 Sobic008G171800--Sobic001G141300 Sobic004G130200 Sobic004G130200 Sobic008G171800--Sobic004G130200 Sobic008G171800--Sobic003G401400 Sobic001G202400--Sobic003G015400 Sobic001G202400--Sobic007G034400 Sobic001G202400--Sobic008G103900 Sobic001G543300 Sobic001G543300 Sobic001G202400--Sobic001G543300 Sobic001G202400--Sobic001G081400 Sobic009G207100 Sobic009G207100 Sobic001G202400--Sobic009G207100 Sobic002G007100 Sobic002G007100 Sobic001G202400--Sobic002G007100 Sobic003G182400 Sobic003G182400 Sobic001G202400--Sobic003G182400 Sobic009G168000 Sobic009G168000 Sobic001G202400--Sobic009G168000 Sobic004G311300 Sobic004G311300 Sobic004G028400--Sobic004G311300 Sobic004G028400--Sobic003G401400 Sobic002G328200 Sobic002G328200 Sobic004G028400--Sobic002G328200 Sobic010G082850 Sobic010G082850 Sobic004G028400--Sobic010G082850 Sobic004G325200 Sobic004G325200 Sobic004G028400--Sobic004G325200 Sobic003G358400 Sobic003G358400 Sobic004G028400--Sobic003G358400 Sobic004G252100 Sobic004G252100 Sobic004G028400--Sobic004G252100 Sobic004G028400--Sobic001G081400 Sobic006G108600 Sobic006G108600 Sobic004G028400--Sobic006G108600
Octagon: transcription factors


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