Gene annotation
Transcriptome id Sobic.001G321500.1
Synonym PP2-A13, AtPP2-A13, Sb01g031190
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
OsFBX391 - F-box domain containing protein, expressed
UniProt C5WUL8
Pfam PF14299
Panther DB PTHR31960:SF2 PTHR31960
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61060 : phloem protein 2-A13
RAP-DB (Rice) LOC_Os10g37830.1 : OsFBX391 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003079
Brachypodium -
Barley HORVU2Hr1G049730.1 , HORVU1Hr1G048690.1 , HORVU1Hr1G017720.7 , HORVU1Hr1G048700.1 , HORVU1Hr1G048700.2 , HORVU1Hr1G048700.4
Wheat TraesCS4B02G356300 , TraesCS1A02G188700 , TraesCS1D02G187700 , TraesCS5A02G525700 , TraesCS1B02G196400 , TraesCS4D02G350000
Populus -


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cDNA sequences
Sobic.001G321500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G352900 expressed protein -
2 Sobic.001G285000 - -
3 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
5 Sobic.006G047000 CBS domain containing membrane protein, putative, expressed -
6 Sobic.006G044932 - -
7 Sobic.004G173500 CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
8 Sobic.001G343900 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
10 Sobic.001G526900 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
12 Sobic.009G156300 pleckstrin homology domain-containing protein, putative, expressed -
13 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
14 Sobic.010G250600 expressed protein -
15 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.006G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBT6 - F-box and tubby domain containing protein, expressed -
17 Sobic.010G012300 expressed protein -
18 Sobic.004G014000 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
19 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A


Gene co-expression network
sample Sobic001G321500 Sobic001G321500 Sobic004G352900 Sobic004G352900 Sobic001G321500--Sobic004G352900 Sobic001G285000 Sobic001G285000 Sobic001G321500--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic001G321500--Sobic001G045000 Sobic006G138500 Sobic006G138500 Sobic001G321500--Sobic006G138500 Sobic006G047000 Sobic006G047000 Sobic001G321500--Sobic006G047000 Sobic006G044932 Sobic006G044932 Sobic001G321500--Sobic006G044932 Sobic004G173500 Sobic004G173500 Sobic001G321500--Sobic004G173500 Sobic001G343900 Sobic001G343900 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic002G427900 Sobic002G427900 Sobic004G352900--Sobic002G427900 Sobic009G156300 Sobic009G156300 Sobic004G352900--Sobic009G156300 Sobic004G014000 Sobic004G014000 Sobic004G352900--Sobic004G014000 Sobic010G066300 Sobic010G066300 Sobic004G352900--Sobic010G066300 Sobic002G254650 Sobic002G254650 Sobic004G352900--Sobic002G254650 Sobic001G536500 Sobic001G536500 Sobic004G352900--Sobic001G536500 Sobic002G117200 Sobic002G117200 Sobic004G352900--Sobic002G117200 Sobic010G029400 Sobic010G029400 Sobic004G352900--Sobic010G029400 Sobic009G131100 Sobic009G131100 Sobic004G352900--Sobic009G131100 Sobic001G285000--Sobic009G156300 Sobic001G285000--Sobic004G352900 Sobic001G285000--Sobic010G066300 Sobic001G285000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G285000--Sobic005G229400 Sobic001G285000--Sobic002G117200 Sobic001G410100 Sobic001G410100 Sobic001G285000--Sobic001G410100 Sobic003G296300 Sobic003G296300 Sobic001G285000--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G285000--Sobic001G530350 Sobic001G045000--Sobic001G321500 Sobic001G045000--Sobic005G229400 Sobic010G090900 Sobic010G090900 Sobic001G045000--Sobic010G090900 Sobic001G045000--Sobic004G173500 Sobic006G277200 Sobic006G277200 Sobic001G045000--Sobic006G277200 Sobic002G119800 Sobic002G119800 Sobic001G045000--Sobic002G119800 Sobic010G009400 Sobic010G009400 Sobic001G045000--Sobic010G009400 Sobic005G129400 Sobic005G129400 Sobic001G045000--Sobic005G129400 Sobic004G214100 Sobic004G214100 Sobic001G045000--Sobic004G214100 Sobic006G138500--Sobic006G044932 Sobic003G277500 Sobic003G277500 Sobic006G138500--Sobic003G277500 Sobic006G138500--Sobic001G321500 Sobic006G138500--Sobic003G296300 Sobic006G138500--Sobic001G410100 Sobic003G352400 Sobic003G352400 Sobic006G138500--Sobic003G352400 Sobic001G287600 Sobic001G287600 Sobic006G138500--Sobic001G287600 Sobic006G138500--Sobic001G285000 Sobic010G052600 Sobic010G052600 Sobic006G138500--Sobic010G052600 Sobic001G234300 Sobic001G234300 Sobic006G047000--Sobic001G234300 Sobic002G421600 Sobic002G421600 Sobic006G047000--Sobic002G421600 Sobic007G177100 Sobic007G177100 Sobic006G047000--Sobic007G177100 Sobic007G126100 Sobic007G126100 Sobic006G047000--Sobic007G126100 Sobic010G030401 Sobic010G030401 Sobic006G047000--Sobic010G030401 Sobic010G250600 Sobic010G250600 Sobic006G047000--Sobic010G250600 Sobic006G159300 Sobic006G159300 Sobic006G047000--Sobic006G159300 Sobic006G047000--Sobic001G321500 Sobic010G194300 Sobic010G194300 Sobic006G047000--Sobic010G194300 Sobic006G044932--Sobic003G277500 Sobic006G044932--Sobic001G343900 Sobic002G407700 Sobic002G407700 Sobic006G044932--Sobic002G407700 Sobic004G010300 Sobic004G010300 Sobic006G044932--Sobic004G010300 Sobic005G228000 Sobic005G228000 Sobic006G044932--Sobic005G228000 Sobic002G373001 Sobic002G373001 Sobic006G044932--Sobic002G373001 Sobic007G196600 Sobic007G196600 Sobic006G044932--Sobic007G196600 Sobic006G044932--Sobic006G138500 Sobic002G333300 Sobic002G333300 Sobic006G044932--Sobic002G333300 Sobic004G173500--Sobic001G321500 Sobic009G127000 Sobic009G127000 Sobic004G173500--Sobic009G127000 Sobic004G173500--Sobic001G045000 Sobic002G296300 Sobic002G296300 Sobic004G173500--Sobic002G296300 Sobic008G097401 Sobic008G097401 Sobic004G173500--Sobic008G097401 Sobic004G145200 Sobic004G145200 Sobic004G173500--Sobic004G145200 Sobic002G378800 Sobic002G378800 Sobic004G173500--Sobic002G378800 Sobic002G258100 Sobic002G258100 Sobic004G173500--Sobic002G258100 Sobic010G012300 Sobic010G012300 Sobic004G173500--Sobic010G012300 Sobic001G343900--Sobic006G044932 Sobic001G343900--Sobic002G407700 Sobic001G343900--Sobic007G196600 Sobic007G044300 Sobic007G044300 Sobic001G343900--Sobic007G044300 Sobic001G343900--Sobic005G228000 Sobic004G186500 Sobic004G186500 Sobic001G343900--Sobic004G186500 Sobic001G343900--Sobic001G410100 Sobic007G195701 Sobic007G195701 Sobic001G343900--Sobic007G195701 Sobic002G222800 Sobic002G222800 Sobic001G343900--Sobic002G222800 Sobic010G047400--Sobic005G228000 Sobic010G204300 Sobic010G204300 Sobic010G047400--Sobic010G204300 Sobic001G019900 Sobic001G019900 Sobic010G047400--Sobic001G019900 Sobic004G157000 Sobic004G157000 Sobic010G047400--Sobic004G157000 Sobic010G217900 Sobic010G217900 Sobic010G047400--Sobic010G217900 Sobic001G064800 Sobic001G064800 Sobic010G047400--Sobic001G064800 Sobic001G283500 Sobic001G283500 Sobic010G047400--Sobic001G283500 Sobic003G249800 Sobic003G249800 Sobic010G047400--Sobic003G249800 Sobic002G212200 Sobic002G212200 Sobic010G047400--Sobic002G212200
Octagon: transcription factors


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