Gene annotation
Transcriptome id Sobic.004G173500.1
Synonym SNRK2-4, ASK1, SNRK2.4, SRK2A, Sb04g022410
Functional annotation CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5XU64
Pfam PF00069
Panther DB PTHR24343 PTHR24343:SF101
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K14498; serine/threonine-protein kinase SRK2
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G60940 : SNF1-related protein kinase 2.10
RAP-DB (Rice) LOC_Os02g34600.1 : CAMK_CAMK_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a020619 , Zm00025a017309 , Zm00025a031584
Brachypodium KQJ99829 , KQJ89539 , KQJ82657 , KQK14205 , PNT61096
Barley HORVU4Hr1G013540.13 , HORVU4Hr1G013540.12 , HORVU4Hr1G013540.11 , HORVU4Hr1G013540.10 , HORVU4Hr1G013540.17 , HORVU4Hr1G013540.16 , HORVU4Hr1G013540.15 , HORVU4Hr1G013540.14 , HORVU4Hr1G013540.18 , HORVU4Hr1G026640.1 , HORVU4Hr1G026640.4 , HORVU4Hr1G026640.5 , HORVU2Hr1G125950.4 , HORVU2Hr1G125950.1 , HORVU2Hr1G125950.2 , HORVU2Hr1G125950.3 , HORVU4Hr1G013540.3 , HORVU4Hr1G013540.2 , HORVU4Hr1G013540.1 , HORVU4Hr1G013540.7 , HORVU4Hr1G013540.6 , HORVU4Hr1G013540.5 , HORVU4Hr1G013540.4 , HORVU4Hr1G013540.9 , HORVU4Hr1G013540.8 , HORVU1Hr1G068240.1 , HORVU2Hr1G075470.9 , HORVU2Hr1G075470.8 , HORVU2Hr1G075470.5 , HORVU2Hr1G075470.3 , HORVU2Hr1G075470.2 , HORVU0Hr1G032220.2 , HORVU0Hr1G032220.1 , HORVU1Hr1G068240.2 , HORVU2Hr1G075470.7 , HORVU2Hr1G075470.6 , HORVU2Hr1G075470.11 , HORVU2Hr1G075470.10 , HORVU2Hr1G075470.12
Wheat TraesCS2A02G303900 , TraesCS4B02G079300 , TraesCS2D02G577000 , TraesCS2B02G320500 , TraesCS2D02G302500 , TraesCS4D02G078100 , TraesCS1D02G308800 , TraesCS1D02G308800 , TraesCS4A02G187900 , TraesCS1B02G320400 , TraesCS2A02G566700 , TraesCS1A02G309400 , TraesCS1A02G309400 , TraesCS3D02G327700 , TraesCS3D02G327700 , TraesCS4A02G235600 , TraesCS3D02G327700 , TraesCS4D02G125500 , TraesCS3A02G334200 , TraesCS4A02G235600 , TraesCS4B02G130300 , TraesCS3B02G365200 , TraesCS2B02G630000
Populus -


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cDNA sequences
Sobic.004G173500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G321500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX391 - F-box domain containing protein, expressed -
2 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
3 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
4 Sobic.002G296300 expressed protein -
5 Sobic.008G097401 - -
6 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
7 Sobic.002G378800 GRAM domain containing protein, expressed -
8 Sobic.002G258100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.010G012300 expressed protein -
10 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
11 Sobic.001G064800 expp1 protein precursor, putative, expressed -
12 Sobic.009G237600 transcription factor, putative, expressed K09060: plant G-box-binding factor
13 Sobic.010G099200 viral-response family protein, expressed -
14 Sobic.001G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@electron transfer flavoprotein subunit alpha, mitochondrial precursor, putative, expressed K03522: fixB, electron transfer flavoprotein alpha subunit
15 Sobic.004G349175 - K14509: ETR, ethylene receptor
16 Sobic.010G228000 Protein kinase domain containing protein, expressed -
17 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
18 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
19 Sobic.008G107500 WRKY96, expressed -
20 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2


Gene co-expression network
sample Sobic004G173500 Sobic004G173500 Sobic001G321500 Sobic001G321500 Sobic004G173500--Sobic001G321500 Sobic009G127000 Sobic009G127000 Sobic004G173500--Sobic009G127000 Sobic001G045000 Sobic001G045000 Sobic004G173500--Sobic001G045000 Sobic002G296300 Sobic002G296300 Sobic004G173500--Sobic002G296300 Sobic008G097401 Sobic008G097401 Sobic004G173500--Sobic008G097401 Sobic004G145200 Sobic004G145200 Sobic004G173500--Sobic004G145200 Sobic002G378800 Sobic002G378800 Sobic004G173500--Sobic002G378800 Sobic002G258100 Sobic002G258100 Sobic004G173500--Sobic002G258100 Sobic010G012300 Sobic010G012300 Sobic004G173500--Sobic010G012300 Sobic004G352900 Sobic004G352900 Sobic001G321500--Sobic004G352900 Sobic001G285000 Sobic001G285000 Sobic001G321500--Sobic001G285000 Sobic001G321500--Sobic001G045000 Sobic006G138500 Sobic006G138500 Sobic001G321500--Sobic006G138500 Sobic006G047000 Sobic006G047000 Sobic001G321500--Sobic006G047000 Sobic006G044932 Sobic006G044932 Sobic001G321500--Sobic006G044932 Sobic001G321500--Sobic004G173500 Sobic001G343900 Sobic001G343900 Sobic001G321500--Sobic001G343900 Sobic010G047400 Sobic010G047400 Sobic001G321500--Sobic010G047400 Sobic001G074200 Sobic001G074200 Sobic009G127000--Sobic001G074200 Sobic009G127000--Sobic004G145200 Sobic010G228000 Sobic010G228000 Sobic009G127000--Sobic010G228000 Sobic007G188100 Sobic007G188100 Sobic009G127000--Sobic007G188100 Sobic010G062800 Sobic010G062800 Sobic009G127000--Sobic010G062800 Sobic001G403700 Sobic001G403700 Sobic009G127000--Sobic001G403700 Sobic001G283500 Sobic001G283500 Sobic009G127000--Sobic001G283500 Sobic007G125900 Sobic007G125900 Sobic009G127000--Sobic007G125900 Sobic002G083266 Sobic002G083266 Sobic009G127000--Sobic002G083266 Sobic001G045000--Sobic001G321500 Sobic005G229400 Sobic005G229400 Sobic001G045000--Sobic005G229400 Sobic010G090900 Sobic010G090900 Sobic001G045000--Sobic010G090900 Sobic001G045000--Sobic004G173500 Sobic006G277200 Sobic006G277200 Sobic001G045000--Sobic006G277200 Sobic002G119800 Sobic002G119800 Sobic001G045000--Sobic002G119800 Sobic010G009400 Sobic010G009400 Sobic001G045000--Sobic010G009400 Sobic005G129400 Sobic005G129400 Sobic001G045000--Sobic005G129400 Sobic004G214100 Sobic004G214100 Sobic001G045000--Sobic004G214100 Sobic005G176000 Sobic005G176000 Sobic002G296300--Sobic005G176000 Sobic002G296300--Sobic008G097401 Sobic010G204300 Sobic010G204300 Sobic002G296300--Sobic010G204300 Sobic007G186300 Sobic007G186300 Sobic002G296300--Sobic007G186300 Sobic003G220600 Sobic003G220600 Sobic002G296300--Sobic003G220600 Sobic003G115800 Sobic003G115800 Sobic002G296300--Sobic003G115800 Sobic003G332401 Sobic003G332401 Sobic002G296300--Sobic003G332401 Sobic002G296300--Sobic001G403700 Sobic003G007500 Sobic003G007500 Sobic002G296300--Sobic003G007500 Sobic008G097401--Sobic002G296300 Sobic009G198500 Sobic009G198500 Sobic008G097401--Sobic009G198500 Sobic001G078500 Sobic001G078500 Sobic008G097401--Sobic001G078500 Sobic010G121300 Sobic010G121300 Sobic008G097401--Sobic010G121300 Sobic004G339200 Sobic004G339200 Sobic008G097401--Sobic004G339200 Sobic008G097401--Sobic001G403700 Sobic004G300900 Sobic004G300900 Sobic008G097401--Sobic004G300900 Sobic002G078400 Sobic002G078400 Sobic008G097401--Sobic002G078400 Sobic003G124800 Sobic003G124800 Sobic008G097401--Sobic003G124800 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic004G145200--Sobic010G062800 Sobic002G362900 Sobic002G362900 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic002G118600 Sobic002G118600 Sobic004G145200--Sobic002G118600 Sobic001G180900 Sobic001G180900 Sobic002G378800--Sobic001G180900 Sobic001G057800 Sobic001G057800 Sobic002G378800--Sobic001G057800 Sobic006G114800 Sobic006G114800 Sobic002G378800--Sobic006G114800 Sobic001G323000 Sobic001G323000 Sobic002G378800--Sobic001G323000 Sobic006G217700 Sobic006G217700 Sobic002G378800--Sobic006G217700 Sobic008G090600 Sobic008G090600 Sobic002G378800--Sobic008G090600 Sobic004G102400 Sobic004G102400 Sobic002G378800--Sobic004G102400 Sobic006G034000 Sobic006G034000 Sobic002G378800--Sobic006G034000 Sobic009G126900 Sobic009G126900 Sobic002G378800--Sobic009G126900 Sobic002G175500 Sobic002G175500 Sobic002G258100--Sobic002G175500 Sobic008G107500 Sobic008G107500 Sobic002G258100--Sobic008G107500 Sobic010G144400 Sobic010G144400 Sobic002G258100--Sobic010G144400 Sobic001G010400 Sobic001G010400 Sobic002G258100--Sobic001G010400 Sobic001G023200 Sobic001G023200 Sobic002G258100--Sobic001G023200 Sobic001G253600 Sobic001G253600 Sobic002G258100--Sobic001G253600 Sobic001G056700 Sobic001G056700 Sobic002G258100--Sobic001G056700 Sobic004G172700 Sobic004G172700 Sobic002G258100--Sobic004G172700 Sobic001G393800 Sobic001G393800 Sobic002G258100--Sobic001G393800 Sobic009G222800 Sobic009G222800 Sobic010G012300--Sobic009G222800 Sobic005G228000 Sobic005G228000 Sobic010G012300--Sobic005G228000 Sobic010G012300--Sobic010G047400 Sobic009G152200 Sobic009G152200 Sobic010G012300--Sobic009G152200 Sobic004G293700 Sobic004G293700 Sobic010G012300--Sobic004G293700 Sobic003G248400 Sobic003G248400 Sobic010G012300--Sobic003G248400 Sobic008G161000 Sobic008G161000 Sobic010G012300--Sobic008G161000 Sobic004G183400 Sobic004G183400 Sobic010G012300--Sobic004G183400 Sobic002G212200 Sobic002G212200 Sobic010G012300--Sobic002G212200
Octagon: transcription factors


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