Gene annotation
Transcriptome id Sobic.009G127000.1
Synonym Sb09g019440
Functional annotation leucine-rich repeat family protein, putative, expressed
UniProt A0A1B6P8T8
Pfam PF08263 PF11721
Panther DB PTHR27003 PTHR27003:SF115
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05990 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os05g32660.1 : leucine-rich repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037638
Brachypodium KQK06461
Barley -
Wheat TraesCS1A02G246500
Populus -


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cDNA sequences
Sobic.009G127000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G074200 LRR receptor-like protein kinase, putative, expressed -
2 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
3 Sobic.010G228000 Protein kinase domain containing protein, expressed -
4 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
5 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
6 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
7 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
8 Sobic.007G125900 protein kinase domain containing protein, expressed -
9 Sobic.002G083266 - K00326: cytochrome-b5 reductase
10 Sobic.010G017000 RNA recognition motif containing protein, putative, expressed -
11 Sobic.008G115500 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
12 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
13 Sobic.001G380400 reticulon domain containing protein, putative, expressed -
14 Sobic.004G183400 expressed protein -
15 Sobic.003G061900 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
16 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
17 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
18 Sobic.002G362900 IBS1, putative, expressed -
19 Sobic.005G176000 zinc finger family protein, putative, expressed -
20 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6


Gene co-expression network
sample Sobic009G127000 Sobic009G127000 Sobic001G074200 Sobic001G074200 Sobic009G127000--Sobic001G074200 Sobic004G145200 Sobic004G145200 Sobic009G127000--Sobic004G145200 Sobic010G228000 Sobic010G228000 Sobic009G127000--Sobic010G228000 Sobic007G188100 Sobic007G188100 Sobic009G127000--Sobic007G188100 Sobic010G062800 Sobic010G062800 Sobic009G127000--Sobic010G062800 Sobic001G403700 Sobic001G403700 Sobic009G127000--Sobic001G403700 Sobic001G283500 Sobic001G283500 Sobic009G127000--Sobic001G283500 Sobic007G125900 Sobic007G125900 Sobic009G127000--Sobic007G125900 Sobic002G083266 Sobic002G083266 Sobic009G127000--Sobic002G083266 Sobic001G074200--Sobic009G127000 Sobic001G074200--Sobic007G125900 Sobic008G115500 Sobic008G115500 Sobic001G074200--Sobic008G115500 Sobic002G379866 Sobic002G379866 Sobic001G074200--Sobic002G379866 Sobic001G147200 Sobic001G147200 Sobic001G074200--Sobic001G147200 Sobic001G157200 Sobic001G157200 Sobic001G074200--Sobic001G157200 Sobic005G117400 Sobic005G117400 Sobic001G074200--Sobic005G117400 Sobic002G118600 Sobic002G118600 Sobic001G074200--Sobic002G118600 Sobic001G074200--Sobic010G228000 Sobic004G145200--Sobic010G228000 Sobic008G016900 Sobic008G016900 Sobic004G145200--Sobic008G016900 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic004G145200--Sobic010G062800 Sobic002G362900 Sobic002G362900 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic004G145200--Sobic002G118600 Sobic002G374100 Sobic002G374100 Sobic010G228000--Sobic002G374100 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic002G294700 Sobic002G294700 Sobic010G228000--Sobic002G294700 Sobic002G330300 Sobic002G330300 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic002G379400 Sobic002G379400 Sobic010G228000--Sobic002G379400 Sobic001G290400 Sobic001G290400 Sobic010G228000--Sobic001G290400 Sobic007G188100--Sobic010G228000 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600 Sobic010G062800--Sobic008G016900 Sobic010G062800--Sobic007G188100 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G062800--Sobic010G228000 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic010G062800--Sobic004G145200 Sobic006G182100 Sobic006G182100 Sobic010G062800--Sobic006G182100 Sobic009G111600 Sobic009G111600 Sobic001G403700--Sobic009G111600 Sobic004G284500 Sobic004G284500 Sobic001G403700--Sobic004G284500 Sobic002G078400 Sobic002G078400 Sobic001G403700--Sobic002G078400 Sobic001G403700--Sobic006G182100 Sobic002G296300 Sobic002G296300 Sobic001G403700--Sobic002G296300 Sobic003G248600 Sobic003G248600 Sobic001G403700--Sobic003G248600 Sobic008G132800 Sobic008G132800 Sobic001G403700--Sobic008G132800 Sobic001G403700--Sobic002G214900 Sobic010G213400 Sobic010G213400 Sobic001G403700--Sobic010G213400 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic010G204300 Sobic010G204300 Sobic001G283500--Sobic010G204300 Sobic001G283500--Sobic002G296300 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic003G348400 Sobic003G348400 Sobic007G125900--Sobic003G348400 Sobic007G125900--Sobic005G117400 Sobic001G151800 Sobic001G151800 Sobic007G125900--Sobic001G151800 Sobic007G125900--Sobic001G074200 Sobic009G236200 Sobic009G236200 Sobic007G125900--Sobic009G236200 Sobic002G355200 Sobic002G355200 Sobic007G125900--Sobic002G355200 Sobic005G016800 Sobic005G016800 Sobic007G125900--Sobic005G016800 Sobic004G102400 Sobic004G102400 Sobic007G125900--Sobic004G102400 Sobic007G125900--Sobic009G127000 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic006G264300 Sobic006G264300 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic006G062800 Sobic006G062800 Sobic002G083266--Sobic006G062800 Sobic002G261900 Sobic002G261900 Sobic002G083266--Sobic002G261900 Sobic002G083266--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic002G083266--Sobic004G272800
Octagon: transcription factors


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