Gene annotation
Transcriptome id Sobic.004G183400.2,Sobic.004G183400.1
Synonym
Functional annotation expressed protein
UniProt -
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G66654 : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os01g15029.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G183400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
2 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.001G147200 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
4 Sobic.004G350300 No apical meristem protein, putative, expressed -
5 Sobic.002G122700 expressed protein -
6 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
7 Sobic.005G176000 zinc finger family protein, putative, expressed -
8 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
9 Sobic.005G195200 expressed protein -
10 Sobic.007G059900 DUF292 domain containing protein, expressed -
11 Sobic.002G180600 expressed protein K17968: TRIAP1, TRIAP1/MDM35 family protein
12 Sobic.010G052800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
13 Sobic.009G127000 leucine-rich repeat family protein, putative, expressed -
14 Sobic.006G078400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
15 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
16 Sobic.006G264300 GA18008-PA, putative, expressed -
17 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
18 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
19 Sobic.001G074200 LRR receptor-like protein kinase, putative, expressed -
20 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -


Gene co-expression network
sample Sobic004G183400 Sobic004G183400 Sobic003G248600 Sobic003G248600 Sobic004G183400--Sobic003G248600 Sobic001G329100 Sobic001G329100 Sobic004G183400--Sobic001G329100 Sobic001G147200 Sobic001G147200 Sobic004G183400--Sobic001G147200 Sobic004G350300 Sobic004G350300 Sobic004G183400--Sobic004G350300 Sobic002G122700 Sobic002G122700 Sobic004G183400--Sobic002G122700 Sobic003G220600 Sobic003G220600 Sobic004G183400--Sobic003G220600 Sobic005G176000 Sobic005G176000 Sobic004G183400--Sobic005G176000 Sobic007G186300 Sobic007G186300 Sobic004G183400--Sobic007G186300 Sobic005G195200 Sobic005G195200 Sobic004G183400--Sobic005G195200 Sobic003G248600--Sobic003G220600 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic001G403700 Sobic001G403700 Sobic003G248600--Sobic001G403700 Sobic009G146100 Sobic009G146100 Sobic003G248600--Sobic009G146100 Sobic002G296300 Sobic002G296300 Sobic003G248600--Sobic002G296300 Sobic001G073000 Sobic001G073000 Sobic003G248600--Sobic001G073000 Sobic006G264300 Sobic006G264300 Sobic001G329100--Sobic006G264300 Sobic001G329100--Sobic005G195200 Sobic002G264400 Sobic002G264400 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic002G180600 Sobic002G180600 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic010G253800 Sobic010G253800 Sobic001G329100--Sobic010G253800 Sobic001G329100--Sobic002G122700 Sobic006G254800 Sobic006G254800 Sobic001G329100--Sobic006G254800 Sobic003G019200 Sobic003G019200 Sobic001G147200--Sobic003G019200 Sobic010G246000 Sobic010G246000 Sobic001G147200--Sobic010G246000 Sobic002G118600 Sobic002G118600 Sobic001G147200--Sobic002G118600 Sobic010G204300 Sobic010G204300 Sobic001G147200--Sobic010G204300 Sobic006G228300 Sobic006G228300 Sobic001G147200--Sobic006G228300 Sobic001G399100 Sobic001G399100 Sobic001G147200--Sobic001G399100 Sobic001G538866 Sobic001G538866 Sobic001G147200--Sobic001G538866 Sobic002G374100 Sobic002G374100 Sobic001G147200--Sobic002G374100 Sobic006G263100 Sobic006G263100 Sobic001G147200--Sobic006G263100 Sobic003G002400 Sobic003G002400 Sobic004G350300--Sobic003G002400 Sobic001G434900 Sobic001G434900 Sobic004G350300--Sobic001G434900 Sobic004G350300--Sobic003G248600 Sobic004G350300--Sobic004G321900 Sobic004G350300--Sobic004G183400 Sobic001G122500 Sobic001G122500 Sobic004G350300--Sobic001G122500 Sobic002G045300 Sobic002G045300 Sobic004G350300--Sobic002G045300 Sobic001G433400 Sobic001G433400 Sobic004G350300--Sobic001G433400 Sobic004G274400 Sobic004G274400 Sobic004G350300--Sobic004G274400 Sobic004G234900 Sobic004G234900 Sobic002G122700--Sobic004G234900 Sobic006G225600 Sobic006G225600 Sobic002G122700--Sobic006G225600 Sobic002G122700--Sobic001G434900 Sobic010G101500 Sobic010G101500 Sobic002G122700--Sobic010G101500 Sobic001G220400 Sobic001G220400 Sobic002G122700--Sobic001G220400 Sobic002G122700--Sobic001G329100 Sobic010G000900 Sobic010G000900 Sobic002G122700--Sobic010G000900 Sobic010G188100 Sobic010G188100 Sobic002G122700--Sobic010G188100 Sobic002G122700--Sobic003G248600 Sobic003G220600--Sobic003G248600 Sobic002G202300 Sobic002G202300 Sobic003G220600--Sobic002G202300 Sobic003G253000 Sobic003G253000 Sobic003G220600--Sobic003G253000 Sobic003G115800 Sobic003G115800 Sobic003G220600--Sobic003G115800 Sobic007G059900 Sobic007G059900 Sobic003G220600--Sobic007G059900 Sobic004G293700 Sobic004G293700 Sobic003G220600--Sobic004G293700 Sobic004G300900 Sobic004G300900 Sobic003G220600--Sobic004G300900 Sobic003G367451 Sobic003G367451 Sobic003G220600--Sobic003G367451 Sobic003G220600--Sobic009G146100 Sobic005G176000--Sobic002G296300 Sobic005G176000--Sobic003G248600 Sobic005G176000--Sobic003G220600 Sobic005G176000--Sobic001G403700 Sobic005G176000--Sobic010G253800 Sobic005G176000--Sobic003G115800 Sobic001G283500 Sobic001G283500 Sobic005G176000--Sobic001G283500 Sobic005G176000--Sobic001G434900 Sobic005G176000--Sobic007G186300 Sobic003G007500 Sobic003G007500 Sobic007G186300--Sobic003G007500 Sobic001G054200 Sobic001G054200 Sobic007G186300--Sobic001G054200 Sobic007G186300--Sobic003G115800 Sobic007G186300--Sobic003G248600 Sobic001G007200 Sobic001G007200 Sobic007G186300--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic007G186300--Sobic009G246950 Sobic010G083700 Sobic010G083700 Sobic007G186300--Sobic010G083700 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic005G195200--Sobic001G329100 Sobic005G195100 Sobic005G195100 Sobic005G195200--Sobic005G195100 Sobic005G195200--Sobic002G180600 Sobic005G195200--Sobic004G183400 Sobic005G195200--Sobic006G254800 Sobic007G062600 Sobic007G062600 Sobic005G195200--Sobic007G062600 Sobic005G195200--Sobic002G122700 Sobic005G195200--Sobic010G253800 Sobic005G195200--Sobic006G225600
Octagon: transcription factors


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