Gene annotation
Transcriptome id Sobic.002G122700.1
Synonym Sb02g010620
Functional annotation expressed protein
UniProt C5X527
Pfam PF11779
Panther DB PTHR33727
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06515 : Protein of unknown function (DUF3317)
RAP-DB (Rice) LOC_Os07g26550.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK16452
Barley -
Wheat TraesCS2B02G397800 , TraesCS2D02G377000 , TraesCS2A02G380700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
2 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
3 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
4 Sobic.010G101500 skp1 family, tetramerisation domain containing protein, expressed K03872: ELOC, elongin-C
5 Sobic.001G220400 SNF7 domain containing protein, putative, expressed K12192: charged multivesicular body protein 2B
6 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
7 Sobic.010G000900 spotted leaf 11, putative, expressed -
8 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
9 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
10 Sobic.001G162100 WRKY94, expressed -
11 Sobic.003G220600 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
12 Sobic.004G350300 No apical meristem protein, putative, expressed -
13 Sobic.004G183400 expressed protein -
14 Sobic.003G367451 - K08516: synaptobrevin homolog YKT6
15 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
16 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
17 Sobic.005G176000 zinc finger family protein, putative, expressed -
18 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
19 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
20 Sobic.006G254800 expressed protein K13153: U11/U12 small nuclear ribonucleoprotein 25 kDa protein


Gene co-expression network
sample Sobic002G122700 Sobic002G122700 Sobic004G234900 Sobic004G234900 Sobic002G122700--Sobic004G234900 Sobic006G225600 Sobic006G225600 Sobic002G122700--Sobic006G225600 Sobic001G434900 Sobic001G434900 Sobic002G122700--Sobic001G434900 Sobic010G101500 Sobic010G101500 Sobic002G122700--Sobic010G101500 Sobic001G220400 Sobic001G220400 Sobic002G122700--Sobic001G220400 Sobic001G329100 Sobic001G329100 Sobic002G122700--Sobic001G329100 Sobic010G000900 Sobic010G000900 Sobic002G122700--Sobic010G000900 Sobic010G188100 Sobic010G188100 Sobic002G122700--Sobic010G188100 Sobic003G248600 Sobic003G248600 Sobic002G122700--Sobic003G248600 Sobic001G098200 Sobic001G098200 Sobic004G234900--Sobic001G098200 Sobic004G234900--Sobic006G225600 Sobic004G234900--Sobic002G122700 Sobic001G162100 Sobic001G162100 Sobic004G234900--Sobic001G162100 Sobic002G251700 Sobic002G251700 Sobic004G234900--Sobic002G251700 Sobic010G174500 Sobic010G174500 Sobic004G234900--Sobic010G174500 Sobic006G254800 Sobic006G254800 Sobic004G234900--Sobic006G254800 Sobic001G180900 Sobic001G180900 Sobic004G234900--Sobic001G180900 Sobic004G234900--Sobic010G000900 Sobic006G225600--Sobic004G234900 Sobic006G225600--Sobic002G251700 Sobic006G225600--Sobic001G162100 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic006G225600--Sobic002G122700 Sobic004G274400 Sobic004G274400 Sobic006G225600--Sobic004G274400 Sobic001G051200 Sobic001G051200 Sobic006G225600--Sobic001G051200 Sobic006G225600--Sobic001G434900 Sobic001G434900--Sobic002G122700 Sobic004G350300 Sobic004G350300 Sobic001G434900--Sobic004G350300 Sobic003G002400 Sobic003G002400 Sobic001G434900--Sobic003G002400 Sobic003G367300 Sobic003G367300 Sobic001G434900--Sobic003G367300 Sobic001G434900--Sobic006G225600 Sobic005G176000 Sobic005G176000 Sobic001G434900--Sobic005G176000 Sobic001G434900--Sobic003G248600 Sobic001G434900--Sobic001G162100 Sobic001G434900--Sobic004G274400 Sobic010G101500--Sobic010G188100 Sobic003G220600 Sobic003G220600 Sobic010G101500--Sobic003G220600 Sobic010G101500--Sobic001G220400 Sobic002G045300 Sobic002G045300 Sobic010G101500--Sobic002G045300 Sobic003G077900 Sobic003G077900 Sobic010G101500--Sobic003G077900 Sobic001G440700 Sobic001G440700 Sobic010G101500--Sobic001G440700 Sobic010G101500--Sobic002G122700 Sobic002G400000 Sobic002G400000 Sobic010G101500--Sobic002G400000 Sobic009G219900 Sobic009G219900 Sobic010G101500--Sobic009G219900 Sobic001G220400--Sobic010G188100 Sobic001G220400--Sobic009G219900 Sobic001G220400--Sobic010G101500 Sobic001G220400--Sobic003G077900 Sobic003G367451 Sobic003G367451 Sobic001G220400--Sobic003G367451 Sobic001G220400--Sobic003G220600 Sobic009G001400 Sobic009G001400 Sobic001G220400--Sobic009G001400 Sobic006G163000 Sobic006G163000 Sobic001G220400--Sobic006G163000 Sobic001G220400--Sobic002G122700 Sobic006G264300 Sobic006G264300 Sobic001G329100--Sobic006G264300 Sobic005G195200 Sobic005G195200 Sobic001G329100--Sobic005G195200 Sobic002G264400 Sobic002G264400 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic002G180600 Sobic002G180600 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic010G253800 Sobic010G253800 Sobic001G329100--Sobic010G253800 Sobic001G329100--Sobic002G122700 Sobic001G329100--Sobic006G254800 Sobic010G000900--Sobic002G400000 Sobic003G012200 Sobic003G012200 Sobic010G000900--Sobic003G012200 Sobic001G047400 Sobic001G047400 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100 Sobic010G188100--Sobic001G220400 Sobic010G188100--Sobic009G219900 Sobic010G188100--Sobic010G101500 Sobic010G188100--Sobic003G367451 Sobic010G188100--Sobic003G077900 Sobic010G188100--Sobic009G001400 Sobic010G188100--Sobic002G400000 Sobic002G166900 Sobic002G166900 Sobic010G188100--Sobic002G166900 Sobic001G283500 Sobic001G283500 Sobic010G188100--Sobic001G283500 Sobic003G248600--Sobic003G220600 Sobic007G186300 Sobic007G186300 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic001G403700 Sobic001G403700 Sobic003G248600--Sobic001G403700 Sobic009G146100 Sobic009G146100 Sobic003G248600--Sobic009G146100 Sobic002G296300 Sobic002G296300 Sobic003G248600--Sobic002G296300 Sobic001G073000 Sobic001G073000 Sobic003G248600--Sobic001G073000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.