Gene annotation
Transcriptome id Sobic.006G254800.1
Synonym Sb06g031870
Functional annotation expressed protein
UniProt C5Y9Y6
Pfam -
Panther DB PTHR14942
NCBI CDD -
KEGG Orthology K13153; U11/U12 small nuclear ribonucleoprotein 25 kDa protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07860 : Ubiquitin-like superfamily protein
RAP-DB (Rice) LOC_Os04g56770.1 : expressed protein
MaizeGDB (Corn) Zm00025a009418
Brachypodium PNT75653 , KQK17721
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G234900 membrane-anchored ubiquitin-fold protein, putative, expressed -
2 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.001G098200 magnesium-dependent phosphatase 1, putative, expressed K17619: magnesium-dependent phosphatase 1
4 Sobic.002G122700 expressed protein -
5 Sobic.003G344900 selT-like protein precursor, putative, expressed -
6 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
7 Sobic.010G000900 spotted leaf 11, putative, expressed -
8 Sobic.010G058500 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
9 Sobic.005G195200 expressed protein -
10 Sobic.009G228800 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
11 Sobic.010G253800 expressed protein -
12 Sobic.003G015900 CWC15 homolog A, putative, expressed K12863: protein CWC15
13 Sobic.006G254700 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
14 Sobic.004G167400 expressed protein -
15 Sobic.001G051200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
K08515: vesicle-associated membrane protein 7
16 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
17 Sobic.002G251700 no apical meristem protein, putative, expressed -
18 Sobic.001G512300 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
19 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
20 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4


Gene co-expression network
sample Sobic006G254800 Sobic006G254800 Sobic004G234900 Sobic004G234900 Sobic006G254800--Sobic004G234900 Sobic001G329100 Sobic001G329100 Sobic006G254800--Sobic001G329100 Sobic001G098200 Sobic001G098200 Sobic006G254800--Sobic001G098200 Sobic002G122700 Sobic002G122700 Sobic006G254800--Sobic002G122700 Sobic003G344900 Sobic003G344900 Sobic006G254800--Sobic003G344900 Sobic006G225600 Sobic006G225600 Sobic006G254800--Sobic006G225600 Sobic010G000900 Sobic010G000900 Sobic006G254800--Sobic010G000900 Sobic010G058500 Sobic010G058500 Sobic006G254800--Sobic010G058500 Sobic005G195200 Sobic005G195200 Sobic006G254800--Sobic005G195200 Sobic004G234900--Sobic001G098200 Sobic004G234900--Sobic006G225600 Sobic004G234900--Sobic002G122700 Sobic001G162100 Sobic001G162100 Sobic004G234900--Sobic001G162100 Sobic002G251700 Sobic002G251700 Sobic004G234900--Sobic002G251700 Sobic010G174500 Sobic010G174500 Sobic004G234900--Sobic010G174500 Sobic004G234900--Sobic006G254800 Sobic001G180900 Sobic001G180900 Sobic004G234900--Sobic001G180900 Sobic004G234900--Sobic010G000900 Sobic006G264300 Sobic006G264300 Sobic001G329100--Sobic006G264300 Sobic001G329100--Sobic005G195200 Sobic002G264400 Sobic002G264400 Sobic001G329100--Sobic002G264400 Sobic004G167400 Sobic004G167400 Sobic001G329100--Sobic004G167400 Sobic002G180600 Sobic002G180600 Sobic001G329100--Sobic002G180600 Sobic003G117900 Sobic003G117900 Sobic001G329100--Sobic003G117900 Sobic010G253800 Sobic010G253800 Sobic001G329100--Sobic010G253800 Sobic001G329100--Sobic002G122700 Sobic001G329100--Sobic006G254800 Sobic001G098200--Sobic004G234900 Sobic001G098200--Sobic006G225600 Sobic004G253000 Sobic004G253000 Sobic001G098200--Sobic004G253000 Sobic001G098200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G098200--Sobic010G090900 Sobic003G050600 Sobic003G050600 Sobic001G098200--Sobic003G050600 Sobic004G301900 Sobic004G301900 Sobic001G098200--Sobic004G301900 Sobic001G051200 Sobic001G051200 Sobic001G098200--Sobic001G051200 Sobic003G044200 Sobic003G044200 Sobic001G098200--Sobic003G044200 Sobic002G122700--Sobic004G234900 Sobic002G122700--Sobic006G225600 Sobic001G434900 Sobic001G434900 Sobic002G122700--Sobic001G434900 Sobic010G101500 Sobic010G101500 Sobic002G122700--Sobic010G101500 Sobic001G220400 Sobic001G220400 Sobic002G122700--Sobic001G220400 Sobic002G122700--Sobic001G329100 Sobic002G122700--Sobic010G000900 Sobic010G188100 Sobic010G188100 Sobic002G122700--Sobic010G188100 Sobic003G248600 Sobic003G248600 Sobic002G122700--Sobic003G248600 Sobic003G012200 Sobic003G012200 Sobic003G344900--Sobic003G012200 Sobic003G344900--Sobic010G000900 Sobic004G348300 Sobic004G348300 Sobic003G344900--Sobic004G348300 Sobic009G259400 Sobic009G259400 Sobic003G344900--Sobic009G259400 Sobic005G044800 Sobic005G044800 Sobic003G344900--Sobic005G044800 Sobic001G123000 Sobic001G123000 Sobic003G344900--Sobic001G123000 Sobic001G047400 Sobic001G047400 Sobic003G344900--Sobic001G047400 Sobic001G181700 Sobic001G181700 Sobic003G344900--Sobic001G181700 Sobic003G344900--Sobic001G051200 Sobic006G225600--Sobic004G234900 Sobic006G225600--Sobic002G251700 Sobic006G225600--Sobic001G162100 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic006G225600--Sobic002G122700 Sobic004G274400 Sobic004G274400 Sobic006G225600--Sobic004G274400 Sobic006G225600--Sobic001G051200 Sobic006G225600--Sobic001G434900 Sobic002G400000 Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic010G000900--Sobic003G012200 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100 Sobic010G058500--Sobic001G051200 Sobic007G186300 Sobic007G186300 Sobic010G058500--Sobic007G186300 Sobic003G007500 Sobic003G007500 Sobic010G058500--Sobic003G007500 Sobic001G067900 Sobic001G067900 Sobic010G058500--Sobic001G067900 Sobic006G254700 Sobic006G254700 Sobic010G058500--Sobic006G254700 Sobic010G058500--Sobic003G261400 Sobic003G115800 Sobic003G115800 Sobic010G058500--Sobic003G115800 Sobic009G154800 Sobic009G154800 Sobic010G058500--Sobic009G154800 Sobic010G058500--Sobic004G234900 Sobic005G195200--Sobic001G329100 Sobic005G195100 Sobic005G195100 Sobic005G195200--Sobic005G195100 Sobic005G195200--Sobic002G180600 Sobic004G183400 Sobic004G183400 Sobic005G195200--Sobic004G183400 Sobic005G195200--Sobic006G254800 Sobic007G062600 Sobic007G062600 Sobic005G195200--Sobic007G062600 Sobic005G195200--Sobic002G122700 Sobic005G195200--Sobic010G253800 Sobic005G195200--Sobic006G225600
Octagon: transcription factors


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