Gene annotation
Transcriptome id Sobic.010G012300.1
Synonym Sb10g001220
Functional annotation expressed protein
UniProt C5Z2T6
Pfam PF06749
Panther DB PTHR31769 PTHR31769:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17210 : Protein of unknown function (DUF1218)
RAP-DB (Rice) LOC_Os06g02440.1 : expressed protein
MaizeGDB (Corn) Zm00025a050255
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G012300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G222800 expressed protein -
2 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
3 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
4 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -
5 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
6 Sobic.003G248400 WRKY16, expressed -
7 Sobic.008G161000 protein kinase domain containing protein, expressed -
8 Sobic.004G183400 expressed protein -
9 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
10 Sobic.002G282400 expressed protein -
11 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
12 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
13 Sobic.001G078500 expressed protein -
14 Sobic.007G059900 DUF292 domain containing protein, expressed -
15 Sobic.001G037000 PHD finger protein, putative, expressed -
16 Sobic.009G171700 SAG20, putative, expressed -
17 Sobic.001G047700 expressed protein -
18 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.010G204300 expressed protein -
20 Sobic.002G296300 expressed protein -


Gene co-expression network
sample Sobic010G012300 Sobic010G012300 Sobic009G222800 Sobic009G222800 Sobic010G012300--Sobic009G222800 Sobic005G228000 Sobic005G228000 Sobic010G012300--Sobic005G228000 Sobic010G047400 Sobic010G047400 Sobic010G012300--Sobic010G047400 Sobic009G152200 Sobic009G152200 Sobic010G012300--Sobic009G152200 Sobic004G293700 Sobic004G293700 Sobic010G012300--Sobic004G293700 Sobic003G248400 Sobic003G248400 Sobic010G012300--Sobic003G248400 Sobic008G161000 Sobic008G161000 Sobic010G012300--Sobic008G161000 Sobic004G183400 Sobic004G183400 Sobic010G012300--Sobic004G183400 Sobic002G212200 Sobic002G212200 Sobic010G012300--Sobic002G212200 Sobic009G222800--Sobic004G293700 Sobic009G222800--Sobic005G228000 Sobic001G037000 Sobic001G037000 Sobic009G222800--Sobic001G037000 Sobic009G222800--Sobic010G012300 Sobic004G079100 Sobic004G079100 Sobic009G222800--Sobic004G079100 Sobic004G248800 Sobic004G248800 Sobic009G222800--Sobic004G248800 Sobic001G422900 Sobic001G422900 Sobic009G222800--Sobic001G422900 Sobic002G282400 Sobic002G282400 Sobic009G222800--Sobic002G282400 Sobic003G181500 Sobic003G181500 Sobic009G222800--Sobic003G181500 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic002G345300 Sobic002G345300 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic005G228000--Sobic010G047400 Sobic010G047400--Sobic005G228000 Sobic010G204300 Sobic010G204300 Sobic010G047400--Sobic010G204300 Sobic010G047400--Sobic001G019900 Sobic010G047400--Sobic004G157000 Sobic010G217900 Sobic010G217900 Sobic010G047400--Sobic010G217900 Sobic001G064800 Sobic001G064800 Sobic010G047400--Sobic001G064800 Sobic001G283500 Sobic001G283500 Sobic010G047400--Sobic001G283500 Sobic003G249800 Sobic003G249800 Sobic010G047400--Sobic003G249800 Sobic010G047400--Sobic002G212200 Sobic009G152200--Sobic008G161000 Sobic007G186300 Sobic007G186300 Sobic009G152200--Sobic007G186300 Sobic007G059900 Sobic007G059900 Sobic009G152200--Sobic007G059900 Sobic001G403700 Sobic001G403700 Sobic009G152200--Sobic001G403700 Sobic001G330700 Sobic001G330700 Sobic009G152200--Sobic001G330700 Sobic009G016201 Sobic009G016201 Sobic009G152200--Sobic009G016201 Sobic003G115800 Sobic003G115800 Sobic009G152200--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic009G152200--Sobic003G248600 Sobic009G152200--Sobic003G249800 Sobic010G253800 Sobic010G253800 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic004G293700--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic004G293700--Sobic001G054200 Sobic004G293700--Sobic004G248800 Sobic009G171700 Sobic009G171700 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic001G399100 Sobic001G399100 Sobic003G248400--Sobic001G399100 Sobic010G107100 Sobic010G107100 Sobic003G248400--Sobic010G107100 Sobic010G250600 Sobic010G250600 Sobic003G248400--Sobic010G250600 Sobic001G047700 Sobic001G047700 Sobic003G248400--Sobic001G047700 Sobic003G248400--Sobic010G047400 Sobic004G058000 Sobic004G058000 Sobic003G248400--Sobic004G058000 Sobic006G192500 Sobic006G192500 Sobic003G248400--Sobic006G192500 Sobic008G179500 Sobic008G179500 Sobic003G248400--Sobic008G179500 Sobic003G248400--Sobic010G012300 Sobic008G161000--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic008G161000--Sobic009G033700 Sobic008G161000--Sobic009G152200 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic008G161000--Sobic009G016201 Sobic008G161000--Sobic010G204300 Sobic010G204600 Sobic010G204600 Sobic008G161000--Sobic010G204600 Sobic010G213400 Sobic010G213400 Sobic008G161000--Sobic010G213400 Sobic004G183400--Sobic003G248600 Sobic001G329100 Sobic001G329100 Sobic004G183400--Sobic001G329100 Sobic001G147200 Sobic001G147200 Sobic004G183400--Sobic001G147200 Sobic004G350300 Sobic004G350300 Sobic004G183400--Sobic004G350300 Sobic002G122700 Sobic002G122700 Sobic004G183400--Sobic002G122700 Sobic004G183400--Sobic003G220600 Sobic005G176000 Sobic005G176000 Sobic004G183400--Sobic005G176000 Sobic004G183400--Sobic007G186300 Sobic005G195200 Sobic005G195200 Sobic004G183400--Sobic005G195200 Sobic002G212200--Sobic005G228000 Sobic002G212200--Sobic001G019900 Sobic002G212200--Sobic001G067601 Sobic007G107000 Sobic007G107000 Sobic002G212200--Sobic007G107000 Sobic002G212200--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic002G212200--Sobic003G162700 Sobic002G212200--Sobic009G023200 Sobic002G212200--Sobic002G282400 Sobic002G212200--Sobic001G064800
Octagon: transcription factors


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