Gene annotation
Transcriptome id Sobic.003G248400.1
Synonym Sb03g030480, WRKY71, ATWRKY71
Functional annotation WRKY16, expressed
UniProt C5XFY7
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G18170 : WRKY DNA-binding protein 28
RAP-DB (Rice) LOC_Os01g47560.1 : WRKY16, expressed
MaizeGDB (Corn) Zm00025a056278 , Zm00025a044587 , Zm00025a043480 , Zm00025a039749 , Zm00025a037544 , Zm00025a029723 , Zm00025a028138 , Zm00025a027025 , Zm00025a015639 , Zm00025a038745 , Zm00025a038604
Brachypodium KQK13089 , KQK04850 , KQK09077 , KQK21180 , KQK05263 , KQK08818 , KQK08819
Barley HORVU3Hr1G088200.3 , HORVU3Hr1G088200.1 , HORVU3Hr1G088200.6 , HORVU3Hr1G088200.5 , HORVU3Hr1G088200.4 , HORVU3Hr1G088200.9 , HORVU3Hr1G088200.8 , HORVU1Hr1G081570.1 , HORVU1Hr1G081570.2 , HORVU1Hr1G081570.4 , HORVU0Hr1G003340.9 , HORVU0Hr1G003340.4 , HORVU0Hr1G003340.6 , HORVU0Hr1G003340.7 , HORVU0Hr1G003340.1 , HORVU0Hr1G003340.2 , HORVU0Hr1G003340.3 , HORVU0Hr1G003340.13 , HORVU0Hr1G003340.10 , HORVU3Hr1G060500.10 , HORVU1Hr1G088300.1 , HORVU1Hr1G088300.2 , HORVU1Hr1G088300.3 , HORVU5Hr1G096800.4 , HORVU5Hr1G096800.5 , HORVU5Hr1G096800.6 , HORVU5Hr1G096800.1 , HORVU5Hr1G096800.3 , HORVU3Hr1G060500.8 , HORVU3Hr1G060500.9 , HORVU3Hr1G060500.6 , HORVU3Hr1G060500.7 , HORVU3Hr1G060500.4 , HORVU3Hr1G060500.5 , HORVU3Hr1G060500.2 , HORVU3Hr1G060500.3 , HORVU3Hr1G060500.1 , HORVU2Hr1G046820.1 , HORVU0Hr1G004890.3 , HORVU0Hr1G004890.2 , HORVU0Hr1G004890.15 , HORVU0Hr1G004890.17 , HORVU0Hr1G004890.11 , HORVU0Hr1G004890.10 , HORVU0Hr1G004890.12 , HORVU0Hr1G004890.18
Wheat TraesCS5B02G401800 , TraesCS2A02G330500 , TraesCS3D02G341100 , TraesCS3B02G270500 , TraesCS5D02G406500 , TraesCS3A02G347500 , TraesCS1D02G351600 , TraesCS5A02G396800 , TraesCS1A02G401800 , TraesCS2B02G351600 , TraesCS3B02G379200 , TraesCS3B02G379200 , TraesCS3D02G226300 , TraesCS1A02G348600 , TraesCS1D02G429800 , TraesCS3B02G256000 , TraesCS3D02G242500 , TraesCS3A02G228600 , TraesCS2D02G332300 , TraesCS1B02G363200 , TraesCS3A02G242500 , TraesCS1B02G453200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
2 Sobic.010G107100 expressed protein -
3 Sobic.010G250600 expressed protein -
4 Sobic.001G047700 expressed protein -
5 Sobic.010G047400 "HGW(Ortholog in rice:Li et al., 2012)"(PubMedID : 31659929)@proline-rich cell wall protein-like, putative, expressed -
6 Sobic.004G058000 VQ domain containing protein, putative, expressed -
7 Sobic.006G192500 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.008G179500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed K07213: ATOX1, ATX1, copZ, copper chaperone
9 Sobic.010G012300 expressed protein -
10 Sobic.001G037000 PHD finger protein, putative, expressed -
11 Sobic.008G161000 protein kinase domain containing protein, expressed -
12 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
13 Sobic.001G454100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
14 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
15 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.001G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
17 Sobic.009G241700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
18 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
19 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
20 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G248400 Sobic003G248400 Sobic001G399100 Sobic001G399100 Sobic003G248400--Sobic001G399100 Sobic010G107100 Sobic010G107100 Sobic003G248400--Sobic010G107100 Sobic010G250600 Sobic010G250600 Sobic003G248400--Sobic010G250600 Sobic001G047700 Sobic001G047700 Sobic003G248400--Sobic001G047700 Sobic010G047400 Sobic010G047400 Sobic003G248400--Sobic010G047400 Sobic004G058000 Sobic004G058000 Sobic003G248400--Sobic004G058000 Sobic006G192500 Sobic006G192500 Sobic003G248400--Sobic006G192500 Sobic008G179500 Sobic008G179500 Sobic003G248400--Sobic008G179500 Sobic010G012300 Sobic010G012300 Sobic003G248400--Sobic010G012300 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic003G019200 Sobic003G019200 Sobic001G399100--Sobic003G019200 Sobic009G200700 Sobic009G200700 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic005G229700 Sobic005G229700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic010G107100--Sobic001G399100 Sobic010G107100--Sobic004G058000 Sobic010G107100--Sobic005G229700 Sobic010G107100--Sobic009G200700 Sobic003G192100 Sobic003G192100 Sobic010G107100--Sobic003G192100 Sobic009G143400 Sobic009G143400 Sobic010G107100--Sobic009G143400 Sobic002G423300 Sobic002G423300 Sobic010G107100--Sobic002G423300 Sobic009G241700 Sobic009G241700 Sobic010G107100--Sobic009G241700 Sobic006G230500 Sobic006G230500 Sobic010G107100--Sobic006G230500 Sobic010G250600--Sobic003G248400 Sobic006G047000 Sobic006G047000 Sobic010G250600--Sobic006G047000 Sobic002G205300 Sobic002G205300 Sobic010G250600--Sobic002G205300 Sobic010G194300 Sobic010G194300 Sobic010G250600--Sobic010G194300 Sobic004G014000 Sobic004G014000 Sobic010G250600--Sobic004G014000 Sobic010G250600--Sobic001G047700 Sobic002G212200 Sobic002G212200 Sobic010G250600--Sobic002G212200 Sobic004G352900 Sobic004G352900 Sobic010G250600--Sobic004G352900 Sobic003G296300 Sobic003G296300 Sobic010G250600--Sobic003G296300 Sobic001G037000 Sobic001G037000 Sobic001G047700--Sobic001G037000 Sobic001G047700--Sobic002G205300 Sobic001G047700--Sobic005G229700 Sobic002G068300 Sobic002G068300 Sobic001G047700--Sobic002G068300 Sobic001G067601 Sobic001G067601 Sobic001G047700--Sobic001G067601 Sobic002G261800 Sobic002G261800 Sobic001G047700--Sobic002G261800 Sobic001G223100 Sobic001G223100 Sobic001G047700--Sobic001G223100 Sobic001G536500 Sobic001G536500 Sobic001G047700--Sobic001G536500 Sobic001G047700--Sobic001G399100 Sobic005G228000 Sobic005G228000 Sobic010G047400--Sobic005G228000 Sobic010G204300 Sobic010G204300 Sobic010G047400--Sobic010G204300 Sobic001G019900 Sobic001G019900 Sobic010G047400--Sobic001G019900 Sobic004G157000 Sobic004G157000 Sobic010G047400--Sobic004G157000 Sobic010G217900 Sobic010G217900 Sobic010G047400--Sobic010G217900 Sobic001G064800 Sobic001G064800 Sobic010G047400--Sobic001G064800 Sobic001G283500 Sobic001G283500 Sobic010G047400--Sobic001G283500 Sobic003G249800 Sobic003G249800 Sobic010G047400--Sobic003G249800 Sobic010G047400--Sobic002G212200 Sobic004G058000--Sobic010G107100 Sobic004G058000--Sobic001G399100 Sobic005G117400 Sobic005G117400 Sobic004G058000--Sobic005G117400 Sobic010G224200 Sobic010G224200 Sobic004G058000--Sobic010G224200 Sobic004G058000--Sobic009G241700 Sobic004G158901 Sobic004G158901 Sobic004G058000--Sobic004G158901 Sobic004G058000--Sobic003G019200 Sobic004G050000 Sobic004G050000 Sobic004G058000--Sobic004G050000 Sobic002G249000 Sobic002G249000 Sobic004G058000--Sobic002G249000 Sobic006G192500--Sobic001G399100 Sobic006G192500--Sobic005G228000 Sobic002G374100 Sobic002G374100 Sobic006G192500--Sobic002G374100 Sobic010G062800 Sobic010G062800 Sobic006G192500--Sobic010G062800 Sobic001G206400 Sobic001G206400 Sobic006G192500--Sobic001G206400 Sobic006G192500--Sobic010G204300 Sobic001G147200 Sobic001G147200 Sobic006G192500--Sobic001G147200 Sobic002G245800 Sobic002G245800 Sobic006G192500--Sobic002G245800 Sobic006G192500--Sobic010G107100 Sobic004G276100 Sobic004G276100 Sobic008G179500--Sobic004G276100 Sobic009G111600 Sobic009G111600 Sobic008G179500--Sobic009G111600 Sobic001G022900 Sobic001G022900 Sobic008G179500--Sobic001G022900 Sobic004G277000 Sobic004G277000 Sobic008G179500--Sobic004G277000 Sobic003G333400 Sobic003G333400 Sobic008G179500--Sobic003G333400 Sobic002G083266 Sobic002G083266 Sobic008G179500--Sobic002G083266 Sobic008G179500--Sobic004G050000 Sobic004G301400 Sobic004G301400 Sobic008G179500--Sobic004G301400 Sobic008G179500--Sobic001G399100 Sobic009G222800 Sobic009G222800 Sobic010G012300--Sobic009G222800 Sobic010G012300--Sobic005G228000 Sobic010G012300--Sobic010G047400 Sobic009G152200 Sobic009G152200 Sobic010G012300--Sobic009G152200 Sobic004G293700 Sobic004G293700 Sobic010G012300--Sobic004G293700 Sobic010G012300--Sobic003G248400 Sobic008G161000 Sobic008G161000 Sobic010G012300--Sobic008G161000 Sobic004G183400 Sobic004G183400 Sobic010G012300--Sobic004G183400 Sobic010G012300--Sobic002G212200
Octagon: transcription factors


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