Gene annotation
Transcriptome id Sobic.001G047700.1
Synonym Sb01g004380
Functional annotation expressed protein
UniProt C5WW61
Pfam -
Panther DB PTHR35104 PTHR35104:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g59225.1 : expressed protein
MaizeGDB (Corn) Zm00025a008653
Brachypodium -
Barley HORVU5Hr1G109640.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G037000 PHD finger protein, putative, expressed -
2 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
3 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
4 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
5 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
6 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
7 Sobic.001G223100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
8 Sobic.001G536500 expressed protein -
9 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
10 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
11 Sobic.004G352900 expressed protein -
12 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
13 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
14 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
15 Sobic.003G248400 WRKY16, expressed -
16 Sobic.001G422900 zinc finger family protein, putative, expressed -
17 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
18 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
19 Sobic.001G064800 expp1 protein precursor, putative, expressed -
20 Sobic.001G225200 expressed protein -


Gene co-expression network
sample Sobic001G047700 Sobic001G047700 Sobic001G037000 Sobic001G037000 Sobic001G047700--Sobic001G037000 Sobic002G205300 Sobic002G205300 Sobic001G047700--Sobic002G205300 Sobic005G229700 Sobic005G229700 Sobic001G047700--Sobic005G229700 Sobic002G068300 Sobic002G068300 Sobic001G047700--Sobic002G068300 Sobic001G067601 Sobic001G067601 Sobic001G047700--Sobic001G067601 Sobic002G261800 Sobic002G261800 Sobic001G047700--Sobic002G261800 Sobic001G223100 Sobic001G223100 Sobic001G047700--Sobic001G223100 Sobic001G536500 Sobic001G536500 Sobic001G047700--Sobic001G536500 Sobic001G399100 Sobic001G399100 Sobic001G047700--Sobic001G399100 Sobic003G249800 Sobic003G249800 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G422900 Sobic001G422900 Sobic001G037000--Sobic001G422900 Sobic010G204600 Sobic010G204600 Sobic001G037000--Sobic010G204600 Sobic001G037000--Sobic001G067601 Sobic009G016201 Sobic009G016201 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic001G037000--Sobic002G205300 Sobic003G181500 Sobic003G181500 Sobic001G037000--Sobic003G181500 Sobic002G205300--Sobic001G037000 Sobic005G103900 Sobic005G103900 Sobic002G205300--Sobic005G103900 Sobic002G282400 Sobic002G282400 Sobic002G205300--Sobic002G282400 Sobic002G205300--Sobic001G422900 Sobic002G205300--Sobic005G229700 Sobic007G107000 Sobic007G107000 Sobic002G205300--Sobic007G107000 Sobic002G205300--Sobic009G016201 Sobic002G205300--Sobic003G249800 Sobic009G070400 Sobic009G070400 Sobic002G205300--Sobic009G070400 Sobic005G229700--Sobic003G265200 Sobic005G229700--Sobic001G422900 Sobic002G245800 Sobic002G245800 Sobic005G229700--Sobic002G245800 Sobic005G229700--Sobic001G037000 Sobic005G229700--Sobic001G399100 Sobic005G229700--Sobic003G181500 Sobic002G055600 Sobic002G055600 Sobic005G229700--Sobic002G055600 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic009G036900 Sobic009G036900 Sobic002G068300--Sobic009G036900 Sobic010G228600 Sobic010G228600 Sobic002G068300--Sobic010G228600 Sobic002G068300--Sobic009G016201 Sobic006G256500 Sobic006G256500 Sobic002G068300--Sobic006G256500 Sobic010G144400 Sobic010G144400 Sobic002G068300--Sobic010G144400 Sobic002G068300--Sobic003G249800 Sobic002G068300--Sobic002G282400 Sobic001G389400 Sobic001G389400 Sobic002G068300--Sobic001G389400 Sobic002G068300--Sobic002G205300 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic009G023200 Sobic009G023200 Sobic001G067601--Sobic009G023200 Sobic002G046100 Sobic002G046100 Sobic001G067601--Sobic002G046100 Sobic010G217900 Sobic010G217900 Sobic001G067601--Sobic010G217900 Sobic001G067601--Sobic003G063200 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic001G067601--Sobic003G181500 Sobic003G162700 Sobic003G162700 Sobic001G067601--Sobic003G162700 Sobic001G064800 Sobic001G064800 Sobic002G261800--Sobic001G064800 Sobic006G141500 Sobic006G141500 Sobic002G261800--Sobic006G141500 Sobic002G261800--Sobic002G282400 Sobic006G204300 Sobic006G204300 Sobic002G261800--Sobic006G204300 Sobic010G153100 Sobic010G153100 Sobic002G261800--Sobic010G153100 Sobic004G172700 Sobic004G172700 Sobic002G261800--Sobic004G172700 Sobic001G445800 Sobic001G445800 Sobic002G261800--Sobic001G445800 Sobic002G261800--Sobic009G016201 Sobic002G180600 Sobic002G180600 Sobic002G261800--Sobic002G180600 Sobic001G225200 Sobic001G225200 Sobic001G223100--Sobic001G225200 Sobic001G223100--Sobic001G047700 Sobic001G223100--Sobic004G172700 Sobic003G418000 Sobic003G418000 Sobic001G223100--Sobic003G418000 Sobic002G328300 Sobic002G328300 Sobic001G223100--Sobic002G328300 Sobic002G254200 Sobic002G254200 Sobic001G223100--Sobic002G254200 Sobic007G126100 Sobic007G126100 Sobic001G223100--Sobic007G126100 Sobic006G106800 Sobic006G106800 Sobic001G223100--Sobic006G106800 Sobic001G082400 Sobic001G082400 Sobic001G223100--Sobic001G082400 Sobic001G536500--Sobic010G204600 Sobic001G536500--Sobic003G063200 Sobic004G186500 Sobic004G186500 Sobic001G536500--Sobic004G186500 Sobic001G536500--Sobic001G445800 Sobic001G536500--Sobic001G019900 Sobic009G131100 Sobic009G131100 Sobic001G536500--Sobic009G131100 Sobic001G390300 Sobic001G390300 Sobic001G536500--Sobic001G390300 Sobic001G536500--Sobic001G037000 Sobic010G054200 Sobic010G054200 Sobic001G536500--Sobic010G054200 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic010G107100 Sobic010G107100 Sobic001G399100--Sobic010G107100 Sobic001G399100--Sobic004G186500 Sobic003G019200 Sobic003G019200 Sobic001G399100--Sobic003G019200 Sobic009G200700 Sobic009G200700 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200
Octagon: transcription factors


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