Gene annotation
Transcriptome id Sobic.001G223100.1,Sobic.001G223100.3,Sobic.001G223100.2
Synonym PTR3, ATPTR3, Sb01g019630
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptide transporter PTR3-A, putative, expressed
UniProt C5WZB1 , A0A1Z5S6V3 , A0A1Z5S6U9
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF73
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G46050 : peptide transporter 3
RAP-DB (Rice) LOC_Os10g33210.1 : peptide transporter PTR3-A, putative, expressed
MaizeGDB (Corn) Zm00025a006660 , Zm00025a008843 , Zm00025a016416 , Zm00025a017653 , Zm00025a006658 , Zm00025a000541
Brachypodium PNT67517 , PNT67518 , KQJ97033 , KQJ97032 , KQJ97031 , KQJ97034 , KQK23746 , KQK15148
Barley HORVU1Hr1G039670.4 , HORVU4Hr1G083650.2 , HORVU4Hr1G083650.3 , HORVU4Hr1G083650.1 , HORVU4Hr1G083650.6 , HORVU4Hr1G083650.7 , HORVU4Hr1G083650.4 , HORVU4Hr1G083650.5 , HORVU4Hr1G083650.8 , HORVU5Hr1G114260.5 , HORVU5Hr1G114260.4 , HORVU1Hr1G039720.10 , HORVU1Hr1G039720.11 , HORVU1Hr1G039720.12 , HORVU1Hr1G039720.13 , HORVU1Hr1G039720.14 , HORVU1Hr1G039720.15 , HORVU1Hr1G039720.16 , HORVU1Hr1G039720.17 , HORVU3Hr1G010570.8 , HORVU3Hr1G010570.4 , HORVU3Hr1G010570.5 , HORVU3Hr1G010570.6 , HORVU3Hr1G010570.7 , HORVU3Hr1G010570.1 , HORVU3Hr1G010570.2 , HORVU3Hr1G010570.3 , HORVU5Hr1G114260.3 , HORVU1Hr1G039670.8 , HORVU1Hr1G039670.9 , HORVU5Hr1G114260.2 , HORVU1Hr1G039670.1 , HORVU1Hr1G039670.2 , HORVU1Hr1G039670.3 , HORVU1Hr1G039670.5 , HORVU1Hr1G039670.6 , HORVU1Hr1G039670.7 , HORVU5Hr1G114260.6 , HORVU6Hr1G008680.1 , HORVU1Hr1G039720.8 , HORVU1Hr1G039720.9 , HORVU1Hr1G039720.2 , HORVU1Hr1G039720.3 , HORVU1Hr1G039720.1 , HORVU1Hr1G039720.6 , HORVU1Hr1G039720.7 , HORVU1Hr1G039720.4 , HORVU1Hr1G039720.5
Wheat TraesCS1A02G150400 , TraesCS3A02G056400 , TraesCS1D02G147400 , TraesCS1B02G168000 , TraesCS6A02G041300 , TraesCS3B02G069100 , TraesCS1D02G147200 , TraesCS5B02G498500 , TraesCS6B02G056500 , TraesCS3D02G056300 , TraesCS5A02G485200 , TraesCS3D02G189500 , TraesCS4D02G335100 , TraesCS3A02G185600 , TraesCS5D02G498800 , TraesCS3B02G215200 , TraesCS1A02G150200 , TraesCS1B02G168100 , TraesCS4B02G338600 , TraesCS5A02G508500 , TraesCS6D02G047600 , TraesCS5D02G498700
Populus PNT15128


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G225200 expressed protein -
2 Sobic.001G047700 expressed protein -
3 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
4 Sobic.003G418000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leucoanthocyanidin dioxygenase, putative, expressed -
5 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
6 Sobic.002G254200 expressed protein -
7 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
8 Sobic.006G106800 - -
9 Sobic.001G082400 cytochrome P450, putative, expressed -
10 Sobic.006G191600 expressed protein -
11 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
13 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.007G107000 pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
15 Sobic.010G030401 - -
16 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
17 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
18 Sobic.004G166400 expressed protein -
19 Sobic.006G269200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
20 Sobic.009G159200 guanylyl cyclase, putative, expressed -


Gene co-expression network
sample Sobic001G223100 Sobic001G223100 Sobic001G225200 Sobic001G225200 Sobic001G223100--Sobic001G225200 Sobic001G047700 Sobic001G047700 Sobic001G223100--Sobic001G047700 Sobic004G172700 Sobic004G172700 Sobic001G223100--Sobic004G172700 Sobic003G418000 Sobic003G418000 Sobic001G223100--Sobic003G418000 Sobic002G328300 Sobic002G328300 Sobic001G223100--Sobic002G328300 Sobic002G254200 Sobic002G254200 Sobic001G223100--Sobic002G254200 Sobic007G126100 Sobic007G126100 Sobic001G223100--Sobic007G126100 Sobic006G106800 Sobic006G106800 Sobic001G223100--Sobic006G106800 Sobic001G082400 Sobic001G082400 Sobic001G223100--Sobic001G082400 Sobic001G225300 Sobic001G225300 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic006G157500 Sobic006G157500 Sobic001G225200--Sobic006G157500 Sobic006G191600 Sobic006G191600 Sobic001G225200--Sobic006G191600 Sobic003G406900 Sobic003G406900 Sobic001G225200--Sobic003G406900 Sobic006G269200 Sobic006G269200 Sobic001G225200--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic001G225200--Sobic007G177100 Sobic006G154500 Sobic006G154500 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic001G037000 Sobic001G037000 Sobic001G047700--Sobic001G037000 Sobic002G205300 Sobic002G205300 Sobic001G047700--Sobic002G205300 Sobic005G229700 Sobic005G229700 Sobic001G047700--Sobic005G229700 Sobic002G068300 Sobic002G068300 Sobic001G047700--Sobic002G068300 Sobic001G067601 Sobic001G067601 Sobic001G047700--Sobic001G067601 Sobic002G261800 Sobic002G261800 Sobic001G047700--Sobic002G261800 Sobic001G047700--Sobic001G223100 Sobic001G536500 Sobic001G536500 Sobic001G047700--Sobic001G536500 Sobic001G399100 Sobic001G399100 Sobic001G047700--Sobic001G399100 Sobic009G016201 Sobic009G016201 Sobic004G172700--Sobic009G016201 Sobic010G144400 Sobic010G144400 Sobic004G172700--Sobic010G144400 Sobic002G282400 Sobic002G282400 Sobic004G172700--Sobic002G282400 Sobic004G172700--Sobic002G261800 Sobic003G249800 Sobic003G249800 Sobic004G172700--Sobic003G249800 Sobic004G172700--Sobic007G126100 Sobic007G095400 Sobic007G095400 Sobic004G172700--Sobic007G095400 Sobic004G172700--Sobic002G328300 Sobic001G064800 Sobic001G064800 Sobic004G172700--Sobic001G064800 Sobic003G418000--Sobic006G106800 Sobic003G418000--Sobic002G254200 Sobic003G418000--Sobic001G223100 Sobic003G418000--Sobic006G269200 Sobic009G030100 Sobic009G030100 Sobic003G418000--Sobic009G030100 Sobic001G415500 Sobic001G415500 Sobic003G418000--Sobic001G415500 Sobic002G291300 Sobic002G291300 Sobic003G418000--Sobic002G291300 Sobic003G418000--Sobic007G126100 Sobic003G418000--Sobic002G328300 Sobic003G285500 Sobic003G285500 Sobic002G328300--Sobic003G285500 Sobic009G143400 Sobic009G143400 Sobic002G328300--Sobic009G143400 Sobic002G328300--Sobic003G265200 Sobic002G328300--Sobic006G106800 Sobic009G254900 Sobic009G254900 Sobic002G328300--Sobic009G254900 Sobic002G328300--Sobic005G229700 Sobic002G367400 Sobic002G367400 Sobic002G328300--Sobic002G367400 Sobic008G034500 Sobic008G034500 Sobic002G328300--Sobic008G034500 Sobic009G221400 Sobic009G221400 Sobic002G328300--Sobic009G221400 Sobic002G254200--Sobic001G225200 Sobic002G254200--Sobic001G225300 Sobic002G254200--Sobic006G269200 Sobic002G254200--Sobic006G154500 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic002G254200--Sobic007G126100 Sobic007G126100--Sobic007G177100 Sobic004G212900 Sobic004G212900 Sobic007G126100--Sobic004G212900 Sobic002G421600 Sobic002G421600 Sobic007G126100--Sobic002G421600 Sobic007G126100--Sobic002G254200 Sobic007G126100--Sobic009G016201 Sobic007G126100--Sobic009G159200 Sobic007G126100--Sobic004G172700 Sobic007G126100--Sobic006G157500 Sobic007G126100--Sobic002G282400 Sobic005G092900 Sobic005G092900 Sobic006G106800--Sobic005G092900 Sobic009G077800 Sobic009G077800 Sobic006G106800--Sobic009G077800 Sobic002G353900 Sobic002G353900 Sobic006G106800--Sobic002G353900 Sobic001G400700 Sobic001G400700 Sobic006G106800--Sobic001G400700 Sobic006G106800--Sobic009G143400 Sobic009G139400 Sobic009G139400 Sobic006G106800--Sobic009G139400 Sobic004G101300 Sobic004G101300 Sobic006G106800--Sobic004G101300 Sobic003G393700 Sobic003G393700 Sobic006G106800--Sobic003G393700 Sobic004G050000 Sobic004G050000 Sobic006G106800--Sobic004G050000 Sobic001G056700 Sobic001G056700 Sobic001G082400--Sobic001G056700 Sobic001G071100 Sobic001G071100 Sobic001G082400--Sobic001G071100 Sobic001G082400--Sobic006G191600 Sobic001G082400--Sobic002G291300 Sobic002G361001 Sobic002G361001 Sobic001G082400--Sobic002G361001 Sobic001G082400--Sobic002G282400 Sobic001G082400--Sobic007G126100 Sobic004G164500 Sobic004G164500 Sobic001G082400--Sobic004G164500 Sobic001G082400--Sobic001G223100
Octagon: transcription factors


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