Gene annotation
Transcriptome id Sobic.002G328300.1
Synonym Sb02g035490
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5XAS4
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF101
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G55180 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os07g35350.2 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048296 , Zm00025a048291 , Zm00025a014851 , Zm00025a022261
Brachypodium KQJ86083 , KQK15883 , KQK15882 , PNT62429
Barley HORVU7Hr1G091100.10 , HORVU7Hr1G091100.11 , HORVU7Hr1G091100.12 , HORVU7Hr1G091100.13 , HORVU7Hr1G091100.14 , HORVU7Hr1G091100.8 , HORVU7Hr1G091100.9 , HORVU7Hr1G091100.2 , HORVU7Hr1G091100.3 , HORVU7Hr1G091100.1 , HORVU7Hr1G091100.6 , HORVU7Hr1G091100.7 , HORVU7Hr1G091100.4 , HORVU2Hr1G044460.4 , HORVU2Hr1G044460.2 , HORVU2Hr1G044460.3 , HORVU2Hr1G044460.1
Wheat TraesCS2A02G216200 , TraesCS6D02G305000 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS5A02G338400 , TraesCS2D02G221800 , TraesCS6B02G355600 , TraesCS2B02G241300 , TraesCS1D02G431300 , TraesCS6A02G325300 , TraesCS1D02G430700 , TraesCS1B02G453900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G285500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY14, expressed -
2 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
3 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
4 Sobic.006G106800 - -
5 Sobic.009G254900 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
6 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
7 Sobic.002G367400 esterase, putative, expressed -
8 Sobic.008G034500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phytosulfokines precursor, putative, expressed -
9 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
10 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
11 Sobic.004G225900 GEM, putative, expressed -
12 Sobic.001G401200 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
14 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
15 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
17 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
18 Sobic.004G101300 expressed protein -
19 Sobic.006G204300 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor TF2, putative, expressed -
20 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic002G328300 Sobic002G328300 Sobic003G285500 Sobic003G285500 Sobic002G328300--Sobic003G285500 Sobic009G143400 Sobic009G143400 Sobic002G328300--Sobic009G143400 Sobic003G265200 Sobic003G265200 Sobic002G328300--Sobic003G265200 Sobic006G106800 Sobic006G106800 Sobic002G328300--Sobic006G106800 Sobic009G254900 Sobic009G254900 Sobic002G328300--Sobic009G254900 Sobic005G229700 Sobic005G229700 Sobic002G328300--Sobic005G229700 Sobic002G367400 Sobic002G367400 Sobic002G328300--Sobic002G367400 Sobic008G034500 Sobic008G034500 Sobic002G328300--Sobic008G034500 Sobic009G221400 Sobic009G221400 Sobic002G328300--Sobic009G221400 Sobic003G037500 Sobic003G037500 Sobic003G285500--Sobic003G037500 Sobic003G285500--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic003G285500--Sobic002G353900 Sobic007G155000 Sobic007G155000 Sobic003G285500--Sobic007G155000 Sobic003G041200 Sobic003G041200 Sobic003G285500--Sobic003G041200 Sobic001G367600 Sobic001G367600 Sobic003G285500--Sobic001G367600 Sobic003G192100 Sobic003G192100 Sobic003G285500--Sobic003G192100 Sobic004G101300 Sobic004G101300 Sobic003G285500--Sobic004G101300 Sobic001G231700 Sobic001G231700 Sobic003G285500--Sobic001G231700 Sobic010G086200 Sobic010G086200 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic003G379800 Sobic003G379800 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic009G143400--Sobic002G046100 Sobic010G149300 Sobic010G149300 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G033700 Sobic009G033700 Sobic009G143400--Sobic009G033700 Sobic006G157500 Sobic006G157500 Sobic003G265200--Sobic006G157500 Sobic003G260300 Sobic003G260300 Sobic003G265200--Sobic003G260300 Sobic002G328400 Sobic002G328400 Sobic003G265200--Sobic002G328400 Sobic001G431500 Sobic001G431500 Sobic003G265200--Sobic001G431500 Sobic002G336600 Sobic002G336600 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic009G184000 Sobic009G184000 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic003G265200--Sobic003G043600 Sobic005G092900 Sobic005G092900 Sobic006G106800--Sobic005G092900 Sobic009G077800 Sobic009G077800 Sobic006G106800--Sobic009G077800 Sobic006G106800--Sobic002G353900 Sobic001G400700 Sobic001G400700 Sobic006G106800--Sobic001G400700 Sobic006G106800--Sobic009G143400 Sobic009G139400 Sobic009G139400 Sobic006G106800--Sobic009G139400 Sobic006G106800--Sobic004G101300 Sobic006G106800--Sobic003G393700 Sobic004G050000 Sobic004G050000 Sobic006G106800--Sobic004G050000 Sobic009G254900--Sobic002G367400 Sobic001G466000 Sobic001G466000 Sobic009G254900--Sobic001G466000 Sobic002G004900 Sobic002G004900 Sobic009G254900--Sobic002G004900 Sobic009G254900--Sobic002G353900 Sobic006G113200 Sobic006G113200 Sobic009G254900--Sobic006G113200 Sobic002G017800 Sobic002G017800 Sobic009G254900--Sobic002G017800 Sobic010G259600 Sobic010G259600 Sobic009G254900--Sobic010G259600 Sobic002G302500 Sobic002G302500 Sobic009G254900--Sobic002G302500 Sobic009G254900--Sobic009G143400 Sobic005G229700--Sobic003G265200 Sobic001G422900 Sobic001G422900 Sobic005G229700--Sobic001G422900 Sobic002G245800 Sobic002G245800 Sobic005G229700--Sobic002G245800 Sobic001G037000 Sobic001G037000 Sobic005G229700--Sobic001G037000 Sobic001G399100 Sobic001G399100 Sobic005G229700--Sobic001G399100 Sobic003G181500 Sobic003G181500 Sobic005G229700--Sobic003G181500 Sobic002G055600 Sobic002G055600 Sobic005G229700--Sobic002G055600 Sobic009G070400 Sobic009G070400 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic004G237800 Sobic004G237800 Sobic002G367400--Sobic004G237800 Sobic002G055700 Sobic002G055700 Sobic002G367400--Sobic002G055700 Sobic002G367400--Sobic002G017800 Sobic002G367400--Sobic001G466000 Sobic002G367400--Sobic001G367600 Sobic003G043500 Sobic003G043500 Sobic002G367400--Sobic003G043500 Sobic009G111000 Sobic009G111000 Sobic002G367400--Sobic009G111000 Sobic001G046100 Sobic001G046100 Sobic002G367400--Sobic001G046100 Sobic004G321300 Sobic004G321300 Sobic002G367400--Sobic004G321300 Sobic001G401300 Sobic001G401300 Sobic008G034500--Sobic001G401300 Sobic003G152100 Sobic003G152100 Sobic008G034500--Sobic003G152100 Sobic008G034500--Sobic002G367400 Sobic002G333900 Sobic002G333900 Sobic008G034500--Sobic002G333900 Sobic008G034500--Sobic001G400700 Sobic008G034500--Sobic001G466000 Sobic008G034500--Sobic002G328300 Sobic003G349600 Sobic003G349600 Sobic008G034500--Sobic003G349600 Sobic008G034500--Sobic009G143400 Sobic009G221400--Sobic002G353900 Sobic003G041600 Sobic003G041600 Sobic009G221400--Sobic003G041600 Sobic006G158600 Sobic006G158600 Sobic009G221400--Sobic006G158600 Sobic008G044300 Sobic008G044300 Sobic009G221400--Sobic008G044300 Sobic009G221400--Sobic002G336600 Sobic001G477600 Sobic001G477600 Sobic009G221400--Sobic001G477600 Sobic004G208700 Sobic004G208700 Sobic009G221400--Sobic004G208700 Sobic009G221400--Sobic009G070400 Sobic002G192000 Sobic002G192000 Sobic009G221400--Sobic002G192000
Octagon: transcription factors


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