Gene annotation
Transcriptome id Sobic.001G401200.1
Synonym RCAR6, Sb01g037960, PYL12
Functional annotation pathogenesis-related Bet v I family protein, putative, expressed
UniProt Q4VQB5
Pfam PF00407
Panther DB PTHR31213 PTHR31213:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009607; response to biotic stimulus GO:0006952defense response


Orthologs (automatic annotation)
TAIR AT2G40330 : PYR1-like 6
RAP-DB (Rice) LOC_Os03g18850.1 : pathogenesis-related Bet v I family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002072 , Zm00025a002073
Brachypodium KQK22066
Barley HORVU4Hr1G054870.3 , HORVU4Hr1G054870.6 , HORVU4Hr1G054870.7 , HORVU4Hr1G054870.4 , HORVU4Hr1G054870.5
Wheat TraesCS4A02G116400 , TraesCS2B02G442700 , TraesCS2D02G317800 , TraesCS2B02G500200 , TraesCS4B02G187800 , TraesCS2A02G423300 , TraesCS7D02G164500 , TraesCS2B02G500100 , TraesCS5D02G018700 , TraesCS4D02G189200 , TraesCS4D02G189200 , TraesCS7A02G162600 , TraesCS2D02G420900 , TraesCS1B02G115600 , TraesCS2B02G500300
Populus -


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cDNA sequences
Sobic.001G401200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G400700 pathogenesis-related Bet v I family protein, putative, expressed -
2 Sobic.001G401300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PR10(PubMedID : 20078779)@accumulation during fungal development(PubMedID : 10356799)@pathogenesis-related Bet v I family protein, putative, expressed -
3 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
4 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.009G043600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.006G106800 - -
7 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
8 Sobic.001G401100 pathogenesis-related Bet v I family protein, putative, expressed -
9 Sobic.002G367400 esterase, putative, expressed -
10 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
11 Sobic.009G234100 WRKY49, expressed -
12 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
13 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
14 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
15 Sobic.001G046100 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
16 Sobic.010G176600 - -
17 Sobic.009G254900 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
18 Sobic.002G328300 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
19 Sobic.006G039700 expressed protein -
20 Sobic.003G393700 zinc finger, RING-type, putative, expressed -


Gene co-expression network
sample Sobic001G401200 Sobic001G401200 Sobic001G400700 Sobic001G400700 Sobic001G401200--Sobic001G400700 Sobic001G401300 Sobic001G401300 Sobic001G401200--Sobic001G401300 Sobic001G400800 Sobic001G400800 Sobic001G401200--Sobic001G400800 Sobic004G245800 Sobic004G245800 Sobic001G401200--Sobic004G245800 Sobic009G043600 Sobic009G043600 Sobic001G401200--Sobic009G043600 Sobic006G106800 Sobic006G106800 Sobic001G401200--Sobic006G106800 Sobic002G353900 Sobic002G353900 Sobic001G401200--Sobic002G353900 Sobic001G401100 Sobic001G401100 Sobic001G401200--Sobic001G401100 Sobic002G367400 Sobic002G367400 Sobic001G401200--Sobic002G367400 Sobic001G400700--Sobic001G400800 Sobic005G101800 Sobic005G101800 Sobic001G400700--Sobic005G101800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G177800 Sobic001G177800 Sobic001G400700--Sobic001G177800 Sobic010G176600 Sobic010G176600 Sobic001G400700--Sobic010G176600 Sobic003G252800 Sobic003G252800 Sobic001G400700--Sobic003G252800 Sobic002G183200 Sobic002G183200 Sobic001G400700--Sobic002G183200 Sobic006G099900 Sobic006G099900 Sobic001G400700--Sobic006G099900 Sobic001G401300--Sobic001G401200 Sobic001G401300--Sobic001G400700 Sobic008G034500 Sobic008G034500 Sobic001G401300--Sobic008G034500 Sobic003G215800 Sobic003G215800 Sobic001G401300--Sobic003G215800 Sobic002G333900 Sobic002G333900 Sobic001G401300--Sobic002G333900 Sobic008G191600 Sobic008G191600 Sobic001G401300--Sobic008G191600 Sobic001G247900 Sobic001G247900 Sobic001G401300--Sobic001G247900 Sobic006G039700 Sobic006G039700 Sobic001G401300--Sobic006G039700 Sobic001G401300--Sobic009G043600 Sobic007G227300 Sobic007G227300 Sobic001G400800--Sobic007G227300 Sobic001G400800--Sobic001G400700 Sobic001G400800--Sobic004G245800 Sobic001G400800--Sobic005G101800 Sobic001G400800--Sobic003G252800 Sobic001G400800--Sobic001G177800 Sobic001G400800--Sobic006G099900 Sobic010G084400 Sobic010G084400 Sobic001G400800--Sobic010G084400 Sobic001G187200 Sobic001G187200 Sobic001G400800--Sobic001G187200 Sobic004G245800--Sobic001G400800 Sobic004G245800--Sobic001G400700 Sobic004G245800--Sobic005G101800 Sobic004G245800--Sobic001G187200 Sobic004G245800--Sobic001G177800 Sobic004G245800--Sobic003G252800 Sobic004G245800--Sobic007G227300 Sobic004G245800--Sobic010G084400 Sobic005G029200 Sobic005G029200 Sobic004G245800--Sobic005G029200 Sobic004G050000 Sobic004G050000 Sobic009G043600--Sobic004G050000 Sobic001G066000 Sobic001G066000 Sobic009G043600--Sobic001G066000 Sobic004G277000 Sobic004G277000 Sobic009G043600--Sobic004G277000 Sobic006G121500 Sobic006G121500 Sobic009G043600--Sobic006G121500 Sobic006G199100 Sobic006G199100 Sobic009G043600--Sobic006G199100 Sobic006G108400 Sobic006G108400 Sobic009G043600--Sobic006G108400 Sobic004G276100 Sobic004G276100 Sobic009G043600--Sobic004G276100 Sobic002G267500 Sobic002G267500 Sobic009G043600--Sobic002G267500 Sobic009G043600--Sobic001G400700 Sobic005G092900 Sobic005G092900 Sobic006G106800--Sobic005G092900 Sobic009G077800 Sobic009G077800 Sobic006G106800--Sobic009G077800 Sobic006G106800--Sobic002G353900 Sobic006G106800--Sobic001G400700 Sobic009G143400 Sobic009G143400 Sobic006G106800--Sobic009G143400 Sobic009G139400 Sobic009G139400 Sobic006G106800--Sobic009G139400 Sobic004G101300 Sobic004G101300 Sobic006G106800--Sobic004G101300 Sobic003G393700 Sobic003G393700 Sobic006G106800--Sobic003G393700 Sobic006G106800--Sobic004G050000 Sobic002G055700 Sobic002G055700 Sobic002G353900--Sobic002G055700 Sobic003G382600 Sobic003G382600 Sobic002G353900--Sobic003G382600 Sobic001G367600 Sobic001G367600 Sobic002G353900--Sobic001G367600 Sobic002G302500 Sobic002G302500 Sobic002G353900--Sobic002G302500 Sobic002G192000 Sobic002G192000 Sobic002G353900--Sobic002G192000 Sobic009G221400 Sobic009G221400 Sobic002G353900--Sobic009G221400 Sobic002G353900--Sobic009G139400 Sobic006G158600 Sobic006G158600 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic009G145500 Sobic009G145500 Sobic001G401100--Sobic009G145500 Sobic006G154500 Sobic006G154500 Sobic001G401100--Sobic006G154500 Sobic009G145600 Sobic009G145600 Sobic001G401100--Sobic009G145600 Sobic001G401100--Sobic006G121500 Sobic003G043600 Sobic003G043600 Sobic001G401100--Sobic003G043600 Sobic003G303100 Sobic003G303100 Sobic001G401100--Sobic003G303100 Sobic003G073380 Sobic003G073380 Sobic001G401100--Sobic003G073380 Sobic004G148200 Sobic004G148200 Sobic001G401100--Sobic004G148200 Sobic003G426400 Sobic003G426400 Sobic001G401100--Sobic003G426400 Sobic004G237800 Sobic004G237800 Sobic002G367400--Sobic004G237800 Sobic002G367400--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic002G367400--Sobic002G017800 Sobic001G466000 Sobic001G466000 Sobic002G367400--Sobic001G466000 Sobic002G367400--Sobic001G367600 Sobic003G043500 Sobic003G043500 Sobic002G367400--Sobic003G043500 Sobic009G111000 Sobic009G111000 Sobic002G367400--Sobic009G111000 Sobic001G046100 Sobic001G046100 Sobic002G367400--Sobic001G046100 Sobic004G321300 Sobic004G321300 Sobic002G367400--Sobic004G321300
Octagon: transcription factors


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