Gene annotation
Transcriptome id Sobic.001G400700.1
Synonym
Functional annotation pathogenesis-related Bet v I family protein, putative, expressed
UniProt A0A1B6QNQ4
Pfam PF00407
Panther DB PTHR31213 PTHR31213:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009607; response to biotic stimulus GO:0006952defense response


Orthologs (automatic annotation)
TAIR AT2G40330 : PYR1-like 6
RAP-DB (Rice) LOC_Os03g18850.1 : pathogenesis-related Bet v I family protein, putative, expressed
MaizeGDB (Corn) Zm00025a002072 , Zm00025a002073
Brachypodium KQK22066
Barley HORVU4Hr1G054870.3 , HORVU4Hr1G054870.6 , HORVU4Hr1G054870.7 , HORVU4Hr1G054870.4 , HORVU4Hr1G054870.5
Wheat TraesCS4A02G116400 , TraesCS2B02G442700 , TraesCS2D02G317800 , TraesCS2B02G500200 , TraesCS4B02G187800 , TraesCS2A02G423300 , TraesCS7D02G164500 , TraesCS2B02G500100 , TraesCS4D02G189200 , TraesCS4D02G189200 , TraesCS7A02G162600 , TraesCS2D02G420900 , TraesCS1B02G115600 , TraesCS2B02G500300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G400800 pathogenesis-related Bet v I family protein, putative, expressed -
2 Sobic.005G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
3 Sobic.004G245800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
6 Sobic.010G176600 - -
7 Sobic.003G252800 hypothetical protein -
8 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
9 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.001G401200 pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.010G084400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
12 Sobic.009G234100 WRKY49, expressed -
13 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.004G189400 expressed protein -
16 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
17 Sobic.001G444400 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.010G117900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.005G063100 expressed protein -
20 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase


Gene co-expression network
sample Sobic001G400700 Sobic001G400700 Sobic001G400800 Sobic001G400800 Sobic001G400700--Sobic001G400800 Sobic005G101800 Sobic005G101800 Sobic001G400700--Sobic005G101800 Sobic004G245800 Sobic004G245800 Sobic001G400700--Sobic004G245800 Sobic003G286600 Sobic003G286600 Sobic001G400700--Sobic003G286600 Sobic001G177800 Sobic001G177800 Sobic001G400700--Sobic001G177800 Sobic010G176600 Sobic010G176600 Sobic001G400700--Sobic010G176600 Sobic003G252800 Sobic003G252800 Sobic001G400700--Sobic003G252800 Sobic002G183200 Sobic002G183200 Sobic001G400700--Sobic002G183200 Sobic006G099900 Sobic006G099900 Sobic001G400700--Sobic006G099900 Sobic007G227300 Sobic007G227300 Sobic001G400800--Sobic007G227300 Sobic001G400800--Sobic001G400700 Sobic001G400800--Sobic004G245800 Sobic001G400800--Sobic005G101800 Sobic001G400800--Sobic003G252800 Sobic001G400800--Sobic001G177800 Sobic001G400800--Sobic006G099900 Sobic010G084400 Sobic010G084400 Sobic001G400800--Sobic010G084400 Sobic001G187200 Sobic001G187200 Sobic001G400800--Sobic001G187200 Sobic005G101800--Sobic010G084400 Sobic010G117900 Sobic010G117900 Sobic005G101800--Sobic010G117900 Sobic005G101800--Sobic003G252800 Sobic005G101800--Sobic007G227300 Sobic001G317200 Sobic001G317200 Sobic005G101800--Sobic001G317200 Sobic003G426300 Sobic003G426300 Sobic005G101800--Sobic003G426300 Sobic005G101800--Sobic006G099900 Sobic009G128700 Sobic009G128700 Sobic005G101800--Sobic009G128700 Sobic005G101800--Sobic001G400800 Sobic004G245800--Sobic001G400800 Sobic004G245800--Sobic001G400700 Sobic004G245800--Sobic005G101800 Sobic004G245800--Sobic001G187200 Sobic004G245800--Sobic001G177800 Sobic004G245800--Sobic003G252800 Sobic004G245800--Sobic007G227300 Sobic004G245800--Sobic010G084400 Sobic005G029200 Sobic005G029200 Sobic004G245800--Sobic005G029200 Sobic003G286600--Sobic010G176600 Sobic008G050600 Sobic008G050600 Sobic003G286600--Sobic008G050600 Sobic005G063100 Sobic005G063100 Sobic003G286600--Sobic005G063100 Sobic003G286600--Sobic006G099900 Sobic004G208700 Sobic004G208700 Sobic003G286600--Sobic004G208700 Sobic002G140400 Sobic002G140400 Sobic003G286600--Sobic002G140400 Sobic003G345100 Sobic003G345100 Sobic003G286600--Sobic003G345100 Sobic003G317100 Sobic003G317100 Sobic003G286600--Sobic003G317100 Sobic009G164600 Sobic009G164600 Sobic003G286600--Sobic009G164600 Sobic007G184600 Sobic007G184600 Sobic001G177800--Sobic007G184600 Sobic009G139400 Sobic009G139400 Sobic001G177800--Sobic009G139400 Sobic001G374700 Sobic001G374700 Sobic001G177800--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic001G177800--Sobic001G402050 Sobic001G177800--Sobic007G227300 Sobic002G200600 Sobic002G200600 Sobic001G177800--Sobic002G200600 Sobic004G189400 Sobic004G189400 Sobic001G177800--Sobic004G189400 Sobic001G177800--Sobic006G099900 Sobic010G009300 Sobic010G009300 Sobic001G177800--Sobic010G009300 Sobic010G176600--Sobic003G286600 Sobic010G176600--Sobic005G063100 Sobic010G176600--Sobic002G140400 Sobic010G176600--Sobic008G050600 Sobic001G423800 Sobic001G423800 Sobic010G176600--Sobic001G423800 Sobic009G234100 Sobic009G234100 Sobic010G176600--Sobic009G234100 Sobic010G084700 Sobic010G084700 Sobic010G176600--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic010G176600--Sobic003G116800 Sobic010G176600--Sobic004G189400 Sobic003G252800--Sobic006G099900 Sobic003G252800--Sobic010G084400 Sobic001G348700 Sobic001G348700 Sobic003G252800--Sobic001G348700 Sobic003G252800--Sobic001G317200 Sobic003G252800--Sobic005G101800 Sobic003G252800--Sobic007G227300 Sobic003G252800--Sobic010G117900 Sobic003G252800--Sobic009G128700 Sobic004G221500 Sobic004G221500 Sobic003G252800--Sobic004G221500 Sobic002G183200--Sobic003G286600 Sobic005G091500 Sobic005G091500 Sobic002G183200--Sobic005G091500 Sobic002G183200--Sobic004G189400 Sobic001G025300 Sobic001G025300 Sobic002G183200--Sobic001G025300 Sobic001G119100 Sobic001G119100 Sobic002G183200--Sobic001G119100 Sobic002G183200--Sobic010G176600 Sobic002G183200--Sobic006G099900 Sobic002G183200--Sobic001G317200 Sobic002G183200--Sobic010G084400 Sobic006G099900--Sobic007G227300 Sobic006G099900--Sobic003G252800 Sobic006G099900--Sobic001G317200 Sobic006G099900--Sobic003G286600 Sobic006G099900--Sobic010G084400 Sobic006G099900--Sobic004G189400 Sobic006G099900--Sobic008G050600 Sobic006G099900--Sobic005G091500 Sobic006G277600 Sobic006G277600 Sobic006G099900--Sobic006G277600
Octagon: transcription factors


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