Gene annotation
Transcriptome id Sobic.002G205300.1
Synonym HCT, Sb02g025010
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
transferase family protein, putative, expressed
UniProt C5XCX2
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os09g25460.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a047051 , Zm00025a005843
Brachypodium KQJ90283 , KQJ98426 , PNT64606
Barley -
Wheat TraesCS7D02G524200 , TraesCS5B02G221700 , TraesCS6A02G232200 , TraesCS5D02G230500 , TraesCS5A02G222700 , TraesCS7A02G537300
Populus -


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cDNA sequences
Sobic.002G205300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G037000 PHD finger protein, putative, expressed -
2 Sobic.005G103900 - -
3 Sobic.002G282400 expressed protein -
4 Sobic.001G422900 zinc finger family protein, putative, expressed -
5 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
6 Sobic.007G107000 pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
7 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
8 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
9 Sobic.009G070400 expressed protein -
10 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
11 Sobic.001G047700 expressed protein -
12 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.003G417350 - -
15 Sobic.001G536500 expressed protein -
16 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
17 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
18 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
19 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
20 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23


Gene co-expression network
sample Sobic002G205300 Sobic002G205300 Sobic001G037000 Sobic001G037000 Sobic002G205300--Sobic001G037000 Sobic005G103900 Sobic005G103900 Sobic002G205300--Sobic005G103900 Sobic002G282400 Sobic002G282400 Sobic002G205300--Sobic002G282400 Sobic001G422900 Sobic001G422900 Sobic002G205300--Sobic001G422900 Sobic005G229700 Sobic005G229700 Sobic002G205300--Sobic005G229700 Sobic007G107000 Sobic007G107000 Sobic002G205300--Sobic007G107000 Sobic009G016201 Sobic009G016201 Sobic002G205300--Sobic009G016201 Sobic003G249800 Sobic003G249800 Sobic002G205300--Sobic003G249800 Sobic009G070400 Sobic009G070400 Sobic002G205300--Sobic009G070400 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G037000--Sobic001G422900 Sobic010G204600 Sobic010G204600 Sobic001G037000--Sobic010G204600 Sobic001G067601 Sobic001G067601 Sobic001G037000--Sobic001G067601 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic001G037000--Sobic002G205300 Sobic003G181500 Sobic003G181500 Sobic001G037000--Sobic003G181500 Sobic005G103900--Sobic002G205300 Sobic005G103900--Sobic007G107000 Sobic001G071100 Sobic001G071100 Sobic005G103900--Sobic001G071100 Sobic003G417350 Sobic003G417350 Sobic005G103900--Sobic003G417350 Sobic005G103900--Sobic001G422900 Sobic005G103900--Sobic005G229700 Sobic004G245100 Sobic004G245100 Sobic005G103900--Sobic004G245100 Sobic003G285500 Sobic003G285500 Sobic005G103900--Sobic003G285500 Sobic003G048000 Sobic003G048000 Sobic005G103900--Sobic003G048000 Sobic002G282400--Sobic003G249800 Sobic010G243200 Sobic010G243200 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic006G141500 Sobic006G141500 Sobic002G282400--Sobic006G141500 Sobic002G282400--Sobic003G181500 Sobic002G282400--Sobic001G037000 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic002G245800 Sobic002G245800 Sobic001G422900--Sobic002G245800 Sobic001G422900--Sobic010G204600 Sobic001G422900--Sobic001G037000 Sobic001G095300 Sobic001G095300 Sobic001G422900--Sobic001G095300 Sobic001G422900--Sobic003G181500 Sobic001G422900--Sobic003G249800 Sobic001G422900--Sobic005G229700 Sobic001G422900--Sobic002G211900 Sobic002G405600 Sobic002G405600 Sobic001G422900--Sobic002G405600 Sobic005G229700--Sobic003G265200 Sobic005G229700--Sobic001G422900 Sobic005G229700--Sobic002G245800 Sobic005G229700--Sobic001G037000 Sobic001G399100 Sobic001G399100 Sobic005G229700--Sobic001G399100 Sobic005G229700--Sobic003G181500 Sobic002G055600 Sobic002G055600 Sobic005G229700--Sobic002G055600 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic007G107000--Sobic009G070400 Sobic001G025300 Sobic001G025300 Sobic007G107000--Sobic001G025300 Sobic002G183200 Sobic002G183200 Sobic007G107000--Sobic002G183200 Sobic009G221400 Sobic009G221400 Sobic007G107000--Sobic009G221400 Sobic003G286600 Sobic003G286600 Sobic007G107000--Sobic003G286600 Sobic010G176600 Sobic010G176600 Sobic007G107000--Sobic010G176600 Sobic002G212200 Sobic002G212200 Sobic007G107000--Sobic002G212200 Sobic007G107000--Sobic002G393000 Sobic007G025500 Sobic007G025500 Sobic007G107000--Sobic007G025500 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic008G161000 Sobic008G161000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic003G249800--Sobic008G161000 Sobic003G249800--Sobic001G037000 Sobic009G033700 Sobic009G033700 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic003G249800--Sobic009G143400 Sobic003G249800--Sobic002G211900 Sobic003G249800--Sobic003G181500 Sobic009G070400--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic009G070400--Sobic001G423800 Sobic009G070400--Sobic002G393000 Sobic008G136400 Sobic008G136400 Sobic009G070400--Sobic008G136400 Sobic004G301000 Sobic004G301000 Sobic009G070400--Sobic004G301000 Sobic006G158600 Sobic006G158600 Sobic009G070400--Sobic006G158600 Sobic009G070400--Sobic003G286600 Sobic002G140400 Sobic002G140400 Sobic009G070400--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic009G070400--Sobic001G038900
Octagon: transcription factors


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