Gene annotation
Transcriptome id Sobic.005G103900.1
Synonym
Functional annotation -
UniProt A0A1B6PRF7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G205300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
2 Sobic.007G107000 pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
3 Sobic.001G071100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
4 Sobic.003G417350 - -
5 Sobic.001G422900 zinc finger family protein, putative, expressed -
6 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
7 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
8 Sobic.003G285500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY14, expressed -
9 Sobic.003G048000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
10 Sobic.006G191600 expressed protein -
11 Sobic.003G250600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsGrx_I1 - glutaredoxin subgroup III, expressed -
12 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
13 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
14 Sobic.002G092801 - -
15 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
16 Sobic.003G037500 WRKY107, expressed -
17 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
18 Sobic.007G123300 C1-like domain containing protein, expressed -
19 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type


Gene co-expression network
sample Sobic005G103900 Sobic005G103900 Sobic002G205300 Sobic002G205300 Sobic005G103900--Sobic002G205300 Sobic007G107000 Sobic007G107000 Sobic005G103900--Sobic007G107000 Sobic001G071100 Sobic001G071100 Sobic005G103900--Sobic001G071100 Sobic003G417350 Sobic003G417350 Sobic005G103900--Sobic003G417350 Sobic001G422900 Sobic001G422900 Sobic005G103900--Sobic001G422900 Sobic005G229700 Sobic005G229700 Sobic005G103900--Sobic005G229700 Sobic004G245100 Sobic004G245100 Sobic005G103900--Sobic004G245100 Sobic003G285500 Sobic003G285500 Sobic005G103900--Sobic003G285500 Sobic003G048000 Sobic003G048000 Sobic005G103900--Sobic003G048000 Sobic001G037000 Sobic001G037000 Sobic002G205300--Sobic001G037000 Sobic002G205300--Sobic005G103900 Sobic002G282400 Sobic002G282400 Sobic002G205300--Sobic002G282400 Sobic002G205300--Sobic001G422900 Sobic002G205300--Sobic005G229700 Sobic002G205300--Sobic007G107000 Sobic009G016201 Sobic009G016201 Sobic002G205300--Sobic009G016201 Sobic003G249800 Sobic003G249800 Sobic002G205300--Sobic003G249800 Sobic009G070400 Sobic009G070400 Sobic002G205300--Sobic009G070400 Sobic007G107000--Sobic009G070400 Sobic001G025300 Sobic001G025300 Sobic007G107000--Sobic001G025300 Sobic002G183200 Sobic002G183200 Sobic007G107000--Sobic002G183200 Sobic009G221400 Sobic009G221400 Sobic007G107000--Sobic009G221400 Sobic003G286600 Sobic003G286600 Sobic007G107000--Sobic003G286600 Sobic010G176600 Sobic010G176600 Sobic007G107000--Sobic010G176600 Sobic002G212200 Sobic002G212200 Sobic007G107000--Sobic002G212200 Sobic002G393000 Sobic002G393000 Sobic007G107000--Sobic002G393000 Sobic007G025500 Sobic007G025500 Sobic007G107000--Sobic007G025500 Sobic001G071100--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic001G071100--Sobic001G423800 Sobic001G071100--Sobic002G282400 Sobic001G015100 Sobic001G015100 Sobic001G071100--Sobic001G015100 Sobic001G071100--Sobic002G393000 Sobic001G071100--Sobic002G183200 Sobic004G301000 Sobic004G301000 Sobic001G071100--Sobic004G301000 Sobic001G119400 Sobic001G119400 Sobic001G071100--Sobic001G119400 Sobic004G221500 Sobic004G221500 Sobic001G071100--Sobic004G221500 Sobic003G192100 Sobic003G192100 Sobic003G417350--Sobic003G192100 Sobic002G326100 Sobic002G326100 Sobic003G417350--Sobic002G326100 Sobic003G417350--Sobic001G015100 Sobic002G329000 Sobic002G329000 Sobic003G417350--Sobic002G329000 Sobic007G155000 Sobic007G155000 Sobic003G417350--Sobic007G155000 Sobic001G038900 Sobic001G038900 Sobic003G417350--Sobic001G038900 Sobic001G192600 Sobic001G192600 Sobic003G417350--Sobic001G192600 Sobic010G268400 Sobic010G268400 Sobic003G417350--Sobic010G268400 Sobic001G367600 Sobic001G367600 Sobic003G417350--Sobic001G367600 Sobic002G245800 Sobic002G245800 Sobic001G422900--Sobic002G245800 Sobic010G204600 Sobic010G204600 Sobic001G422900--Sobic010G204600 Sobic001G422900--Sobic001G037000 Sobic001G095300 Sobic001G095300 Sobic001G422900--Sobic001G095300 Sobic003G181500 Sobic003G181500 Sobic001G422900--Sobic003G181500 Sobic001G422900--Sobic003G249800 Sobic001G422900--Sobic005G229700 Sobic002G211900 Sobic002G211900 Sobic001G422900--Sobic002G211900 Sobic002G405600 Sobic002G405600 Sobic001G422900--Sobic002G405600 Sobic003G265200 Sobic003G265200 Sobic005G229700--Sobic003G265200 Sobic005G229700--Sobic001G422900 Sobic005G229700--Sobic002G245800 Sobic005G229700--Sobic001G037000 Sobic001G399100 Sobic001G399100 Sobic005G229700--Sobic001G399100 Sobic005G229700--Sobic003G181500 Sobic002G055600 Sobic002G055600 Sobic005G229700--Sobic002G055600 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic003G037500 Sobic003G037500 Sobic004G245100--Sobic003G037500 Sobic006G268800 Sobic006G268800 Sobic004G245100--Sobic006G268800 Sobic001G318500 Sobic001G318500 Sobic004G245100--Sobic001G318500 Sobic009G145500 Sobic009G145500 Sobic004G245100--Sobic009G145500 Sobic003G228200 Sobic003G228200 Sobic004G245100--Sobic003G228200 Sobic003G007600 Sobic003G007600 Sobic004G245100--Sobic003G007600 Sobic003G073380 Sobic003G073380 Sobic004G245100--Sobic003G073380 Sobic008G027600 Sobic008G027600 Sobic004G245100--Sobic008G027600 Sobic003G043600 Sobic003G043600 Sobic004G245100--Sobic003G043600 Sobic003G285500--Sobic003G037500 Sobic003G285500--Sobic009G221400 Sobic002G353900 Sobic002G353900 Sobic003G285500--Sobic002G353900 Sobic003G285500--Sobic007G155000 Sobic003G041200 Sobic003G041200 Sobic003G285500--Sobic003G041200 Sobic003G285500--Sobic001G367600 Sobic003G285500--Sobic003G192100 Sobic004G101300 Sobic004G101300 Sobic003G285500--Sobic004G101300 Sobic001G231700 Sobic001G231700 Sobic003G285500--Sobic001G231700 Sobic006G157500 Sobic006G157500 Sobic003G048000--Sobic006G157500 Sobic009G168900 Sobic009G168900 Sobic003G048000--Sobic009G168900 Sobic003G048000--Sobic003G265200 Sobic003G360000 Sobic003G360000 Sobic003G048000--Sobic003G360000 Sobic001G304700 Sobic001G304700 Sobic003G048000--Sobic001G304700 Sobic003G303100 Sobic003G303100 Sobic003G048000--Sobic003G303100 Sobic005G196800 Sobic005G196800 Sobic003G048000--Sobic005G196800 Sobic006G154500 Sobic006G154500 Sobic003G048000--Sobic006G154500 Sobic002G330000 Sobic002G330000 Sobic003G048000--Sobic002G330000
Octagon: transcription factors


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