Gene annotation
Transcriptome id Sobic.001G071100.1
Synonym Sb01g006420
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
heat shock protein DnaJ, putative, expressed
UniProt C5WZ38
Pfam -
Panther DB PTHR12763 PTHR12763:SF31
NCBI CDD KOG0723; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09539; DnaJ homolog subfamily C member 19
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35795 : Chaperone DnaJ-domain superfamily protein
RAP-DB (Rice) LOC_Os03g56540.3 : heat shock protein DnaJ, putative, expressed
MaizeGDB (Corn) Zm00025a008394
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G176600 - -
2 Sobic.001G423800 DNA binding protein, putative, expressed -
3 Sobic.002G282400 expressed protein -
4 Sobic.001G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
5 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
6 Sobic.002G183200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
7 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
8 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.004G221500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein K13113: UBL5, ubiquitin-like protein 5
10 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
11 Sobic.004G061200 expressed protein -
12 Sobic.001G192200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
14 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
15 Sobic.001G124600 - -
16 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
17 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
18 Sobic.010G084700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
19 Sobic.004G189400 expressed protein -
20 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type


Gene co-expression network
sample Sobic001G071100 Sobic001G071100 Sobic010G176600 Sobic010G176600 Sobic001G071100--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic001G071100--Sobic001G423800 Sobic002G282400 Sobic002G282400 Sobic001G071100--Sobic002G282400 Sobic001G015100 Sobic001G015100 Sobic001G071100--Sobic001G015100 Sobic002G393000 Sobic002G393000 Sobic001G071100--Sobic002G393000 Sobic002G183200 Sobic002G183200 Sobic001G071100--Sobic002G183200 Sobic004G301000 Sobic004G301000 Sobic001G071100--Sobic004G301000 Sobic001G119400 Sobic001G119400 Sobic001G071100--Sobic001G119400 Sobic004G221500 Sobic004G221500 Sobic001G071100--Sobic004G221500 Sobic003G286600 Sobic003G286600 Sobic010G176600--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic010G176600--Sobic005G063100 Sobic002G140400 Sobic002G140400 Sobic010G176600--Sobic002G140400 Sobic008G050600 Sobic008G050600 Sobic010G176600--Sobic008G050600 Sobic010G176600--Sobic001G423800 Sobic009G234100 Sobic009G234100 Sobic010G176600--Sobic009G234100 Sobic010G084700 Sobic010G084700 Sobic010G176600--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic010G176600--Sobic003G116800 Sobic004G189400 Sobic004G189400 Sobic010G176600--Sobic004G189400 Sobic004G243100 Sobic004G243100 Sobic001G423800--Sobic004G243100 Sobic001G423800--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic001G423800--Sobic001G038900 Sobic001G423800--Sobic001G119400 Sobic001G018300 Sobic001G018300 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic008G136400 Sobic008G136400 Sobic001G423800--Sobic008G136400 Sobic001G423800--Sobic002G393000 Sobic001G423800--Sobic004G189400 Sobic003G249800 Sobic003G249800 Sobic002G282400--Sobic003G249800 Sobic010G243200 Sobic010G243200 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic006G141500 Sobic006G141500 Sobic002G282400--Sobic006G141500 Sobic003G181500 Sobic003G181500 Sobic002G282400--Sobic003G181500 Sobic001G037000 Sobic001G037000 Sobic002G282400--Sobic001G037000 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G282400--Sobic002G393000 Sobic001G015100--Sobic002G140400 Sobic004G187900 Sobic004G187900 Sobic001G015100--Sobic004G187900 Sobic003G430400 Sobic003G430400 Sobic001G015100--Sobic003G430400 Sobic007G155200 Sobic007G155200 Sobic001G015100--Sobic007G155200 Sobic001G124600 Sobic001G124600 Sobic001G015100--Sobic001G124600 Sobic001G015100--Sobic001G423800 Sobic010G238600 Sobic010G238600 Sobic001G015100--Sobic010G238600 Sobic001G015100--Sobic001G038900 Sobic001G015100--Sobic002G211900 Sobic002G393000--Sobic001G119400 Sobic006G275200 Sobic006G275200 Sobic002G393000--Sobic006G275200 Sobic006G173900 Sobic006G173900 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic002G393000--Sobic009G008900 Sobic002G393000--Sobic008G136400 Sobic010G099900 Sobic010G099900 Sobic002G393000--Sobic010G099900 Sobic002G414600 Sobic002G414600 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic002G183200--Sobic003G286600 Sobic005G091500 Sobic005G091500 Sobic002G183200--Sobic005G091500 Sobic002G183200--Sobic004G189400 Sobic001G025300 Sobic001G025300 Sobic002G183200--Sobic001G025300 Sobic001G119100 Sobic001G119100 Sobic002G183200--Sobic001G119100 Sobic002G183200--Sobic010G176600 Sobic006G099900 Sobic006G099900 Sobic002G183200--Sobic006G099900 Sobic001G317200 Sobic001G317200 Sobic002G183200--Sobic001G317200 Sobic010G084400 Sobic010G084400 Sobic002G183200--Sobic010G084400 Sobic004G100700 Sobic004G100700 Sobic004G301000--Sobic004G100700 Sobic001G108200 Sobic001G108200 Sobic004G301000--Sobic001G108200 Sobic001G481100 Sobic001G481100 Sobic004G301000--Sobic001G481100 Sobic004G301000--Sobic001G423800 Sobic002G188900 Sobic002G188900 Sobic004G301000--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic004G301000--Sobic004G141200 Sobic005G011300 Sobic005G011300 Sobic004G301000--Sobic005G011300 Sobic005G099000 Sobic005G099000 Sobic004G301000--Sobic005G099000 Sobic002G251000 Sobic002G251000 Sobic004G301000--Sobic002G251000 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic004G221500--Sobic010G084700 Sobic006G084600 Sobic006G084600 Sobic004G221500--Sobic006G084600 Sobic001G348700 Sobic001G348700 Sobic004G221500--Sobic001G348700 Sobic002G184200 Sobic002G184200 Sobic004G221500--Sobic002G184200 Sobic004G221500--Sobic001G423800 Sobic010G084100 Sobic010G084100 Sobic004G221500--Sobic010G084100 Sobic003G252800 Sobic003G252800 Sobic004G221500--Sobic003G252800 Sobic004G221500--Sobic003G286600 Sobic010G117900 Sobic010G117900 Sobic004G221500--Sobic010G117900
Octagon: transcription factors


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