Gene annotation
Transcriptome id Sobic.002G282400.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QDV4
Pfam PF08571
Panther DB PTHR15858 PTHR15858:SF0
NCBI CDD KOG4779; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37975 : Yos1-like protein
RAP-DB (Rice) LOC_Os09g15760.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK21846 , PNT77480 , PNT77481
Barley HORVU4Hr1G050960.4 , HORVU4Hr1G050960.5 , HORVU4Hr1G050960.6 , HORVU4Hr1G050960.7 , HORVU4Hr1G050960.1 , HORVU4Hr1G050960.2 , HORVU4Hr1G050960.3 , HORVU3Hr1G092790.2 , HORVU3Hr1G092790.3 , HORVU3Hr1G061510.1 , HORVU3Hr1G092790.1 , HORVU3Hr1G092790.4 , HORVU3Hr1G061510.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G282400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
2 Sobic.010G243200 ZOS6-08 - C2H2 zinc finger protein, expressed K14816: pre-60S factor REI1
3 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
4 Sobic.006G141500 expressed protein -
5 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
6 Sobic.001G037000 PHD finger protein, putative, expressed -
7 Sobic.001G071100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed K09539: DnaJ homolog subfamily C member 19
8 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
9 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
10 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
11 Sobic.009G070400 expressed protein -
12 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
13 Sobic.004G061200 expressed protein -
14 Sobic.010G099900 expressed protein -
15 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
16 Sobic.003G379800 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
18 Sobic.002G330000 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
19 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
20 Sobic.003G393700 zinc finger, RING-type, putative, expressed -


Gene co-expression network
sample Sobic002G282400 Sobic002G282400 Sobic003G249800 Sobic003G249800 Sobic002G282400--Sobic003G249800 Sobic010G243200 Sobic010G243200 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic006G141500 Sobic006G141500 Sobic002G282400--Sobic006G141500 Sobic003G181500 Sobic003G181500 Sobic002G282400--Sobic003G181500 Sobic001G037000 Sobic001G037000 Sobic002G282400--Sobic001G037000 Sobic001G071100 Sobic001G071100 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic003G249800--Sobic001G037000 Sobic009G033700 Sobic009G033700 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic003G249800--Sobic009G143400 Sobic003G249800--Sobic002G211900 Sobic003G249800--Sobic003G181500 Sobic010G243200--Sobic006G141500 Sobic010G243200--Sobic002G282400 Sobic002G218000 Sobic002G218000 Sobic010G243200--Sobic002G218000 Sobic003G350300 Sobic003G350300 Sobic010G243200--Sobic003G350300 Sobic003G321700 Sobic003G321700 Sobic010G243200--Sobic003G321700 Sobic001G177800 Sobic001G177800 Sobic010G243200--Sobic001G177800 Sobic010G243200--Sobic003G181500 Sobic001G288800 Sobic001G288800 Sobic010G243200--Sobic001G288800 Sobic002G187500 Sobic002G187500 Sobic010G243200--Sobic002G187500 Sobic010G086200 Sobic010G086200 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic003G379800 Sobic003G379800 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic009G143400--Sobic002G046100 Sobic010G149300 Sobic010G149300 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G143400--Sobic009G033700 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic006G141500--Sobic010G243200 Sobic006G141500--Sobic002G282400 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic006G141500--Sobic002G046100 Sobic004G187900 Sobic004G187900 Sobic003G181500--Sobic004G187900 Sobic003G181500--Sobic003G350300 Sobic003G181500--Sobic010G149300 Sobic003G181500--Sobic003G249800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic009G023200 Sobic009G023200 Sobic003G181500--Sobic009G023200 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G422900 Sobic001G422900 Sobic001G037000--Sobic001G422900 Sobic010G204600 Sobic010G204600 Sobic001G037000--Sobic010G204600 Sobic001G067601 Sobic001G067601 Sobic001G037000--Sobic001G067601 Sobic009G016201 Sobic009G016201 Sobic001G037000--Sobic009G016201 Sobic003G265200 Sobic003G265200 Sobic001G037000--Sobic003G265200 Sobic002G205300 Sobic002G205300 Sobic001G037000--Sobic002G205300 Sobic001G037000--Sobic003G181500 Sobic010G176600 Sobic010G176600 Sobic001G071100--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic001G071100--Sobic001G423800 Sobic001G071100--Sobic002G282400 Sobic001G015100 Sobic001G015100 Sobic001G071100--Sobic001G015100 Sobic001G071100--Sobic002G393000 Sobic002G183200 Sobic002G183200 Sobic001G071100--Sobic002G183200 Sobic004G301000 Sobic004G301000 Sobic001G071100--Sobic004G301000 Sobic001G119400 Sobic001G119400 Sobic001G071100--Sobic001G119400 Sobic004G221500 Sobic004G221500 Sobic001G071100--Sobic004G221500 Sobic002G211900--Sobic003G249800 Sobic002G211900--Sobic001G015100 Sobic002G211900--Sobic003G181500 Sobic004G177700 Sobic004G177700 Sobic002G211900--Sobic004G177700 Sobic002G211900--Sobic002G046100 Sobic001G477300 Sobic001G477300 Sobic002G211900--Sobic001G477300 Sobic002G312400 Sobic002G312400 Sobic002G211900--Sobic002G312400 Sobic001G095300 Sobic001G095300 Sobic002G211900--Sobic001G095300 Sobic001G308300 Sobic001G308300 Sobic002G211900--Sobic001G308300 Sobic002G393000--Sobic001G119400 Sobic006G275200 Sobic006G275200 Sobic002G393000--Sobic006G275200 Sobic006G173900 Sobic006G173900 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic002G393000--Sobic009G008900 Sobic008G136400 Sobic008G136400 Sobic002G393000--Sobic008G136400 Sobic010G099900 Sobic010G099900 Sobic002G393000--Sobic010G099900 Sobic002G414600 Sobic002G414600 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400
Octagon: transcription factors


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