Gene annotation
Transcriptome id Sobic.010G243200.1
Synonym Sb10g028300
Functional annotation ZOS6-08 - C2H2 zinc finger protein, expressed
UniProt C5Z8Q8
Pfam PF12171 PF12756
Panther DB PTHR13182 PTHR13182:SF8
NCBI CDD KOG2785; C2H2-type Zn-finger protein
KEGG Orthology K14816; pre-60S factor REI1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31420 : Zinc finger protein 622
RAP-DB (Rice) LOC_Os06g47840.1 : ZOS6-08 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a018268
Brachypodium KQK17270
Barley HORVU7Hr1G099070.8 , HORVU7Hr1G099070.9 , HORVU7Hr1G099070.1
Wheat TraesCS7A02G432100 , TraesCS7B02G332300 , TraesCS7D02G423800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G141500 expressed protein -
2 Sobic.002G282400 expressed protein -
3 Sobic.002G218000 expressed protein K13528: mediator of RNA polymerase II transcription subunit 20
4 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
5 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
6 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
7 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
8 Sobic.001G288800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3
9 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
10 Sobic.010G099900 expressed protein -
11 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
12 Sobic.001G070800 expressed protein -
13 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
14 Sobic.010G260100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
15 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
16 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
17 Sobic.004G248800 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
18 Sobic.010G257100 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
19 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
20 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -


Gene co-expression network
sample Sobic010G243200 Sobic010G243200 Sobic006G141500 Sobic006G141500 Sobic010G243200--Sobic006G141500 Sobic002G282400 Sobic002G282400 Sobic010G243200--Sobic002G282400 Sobic002G218000 Sobic002G218000 Sobic010G243200--Sobic002G218000 Sobic003G350300 Sobic003G350300 Sobic010G243200--Sobic003G350300 Sobic003G321700 Sobic003G321700 Sobic010G243200--Sobic003G321700 Sobic001G177800 Sobic001G177800 Sobic010G243200--Sobic001G177800 Sobic003G181500 Sobic003G181500 Sobic010G243200--Sobic003G181500 Sobic001G288800 Sobic001G288800 Sobic010G243200--Sobic001G288800 Sobic002G187500 Sobic002G187500 Sobic010G243200--Sobic002G187500 Sobic003G253000 Sobic003G253000 Sobic006G141500--Sobic003G253000 Sobic006G141500--Sobic010G243200 Sobic006G141500--Sobic002G282400 Sobic006G141500--Sobic002G218000 Sobic004G300900 Sobic004G300900 Sobic006G141500--Sobic004G300900 Sobic006G141500--Sobic003G350300 Sobic008G161800 Sobic008G161800 Sobic006G141500--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic006G141500--Sobic004G248800 Sobic002G046100 Sobic002G046100 Sobic006G141500--Sobic002G046100 Sobic003G249800 Sobic003G249800 Sobic002G282400--Sobic003G249800 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic002G282400--Sobic006G141500 Sobic002G282400--Sobic003G181500 Sobic001G037000 Sobic001G037000 Sobic002G282400--Sobic001G037000 Sobic001G071100 Sobic001G071100 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic009G180000 Sobic009G180000 Sobic002G218000--Sobic009G180000 Sobic002G218000--Sobic006G141500 Sobic002G218000--Sobic003G249800 Sobic010G204500 Sobic010G204500 Sobic002G218000--Sobic010G204500 Sobic005G111100 Sobic005G111100 Sobic002G218000--Sobic005G111100 Sobic001G066700 Sobic001G066700 Sobic002G218000--Sobic001G066700 Sobic010G106200 Sobic010G106200 Sobic002G218000--Sobic010G106200 Sobic002G218000--Sobic010G243200 Sobic002G330000 Sobic002G330000 Sobic002G218000--Sobic002G330000 Sobic004G187900 Sobic004G187900 Sobic003G350300--Sobic004G187900 Sobic002G345300 Sobic002G345300 Sobic003G350300--Sobic002G345300 Sobic003G350300--Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic003G350300--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic003G350300--Sobic001G281400 Sobic004G321300 Sobic004G321300 Sobic003G350300--Sobic004G321300 Sobic010G274900 Sobic010G274900 Sobic003G350300--Sobic010G274900 Sobic010G086200 Sobic010G086200 Sobic003G350300--Sobic010G086200 Sobic003G350300--Sobic003G181500 Sobic007G212600 Sobic007G212600 Sobic003G321700--Sobic007G212600 Sobic010G260100 Sobic010G260100 Sobic003G321700--Sobic010G260100 Sobic001G091801 Sobic001G091801 Sobic003G321700--Sobic001G091801 Sobic007G190800 Sobic007G190800 Sobic003G321700--Sobic007G190800 Sobic003G322400 Sobic003G322400 Sobic003G321700--Sobic003G322400 Sobic010G259900 Sobic010G259900 Sobic003G321700--Sobic010G259900 Sobic004G145801 Sobic004G145801 Sobic003G321700--Sobic004G145801 Sobic006G147000 Sobic006G147000 Sobic003G321700--Sobic006G147000 Sobic004G104100 Sobic004G104100 Sobic003G321700--Sobic004G104100 Sobic007G184600 Sobic007G184600 Sobic001G177800--Sobic007G184600 Sobic009G139400 Sobic009G139400 Sobic001G177800--Sobic009G139400 Sobic001G374700 Sobic001G374700 Sobic001G177800--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic001G177800--Sobic001G402050 Sobic007G227300 Sobic007G227300 Sobic001G177800--Sobic007G227300 Sobic002G200600 Sobic002G200600 Sobic001G177800--Sobic002G200600 Sobic004G189400 Sobic004G189400 Sobic001G177800--Sobic004G189400 Sobic006G099900 Sobic006G099900 Sobic001G177800--Sobic006G099900 Sobic010G009300 Sobic010G009300 Sobic001G177800--Sobic010G009300 Sobic003G181500--Sobic004G187900 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G181500--Sobic003G249800 Sobic003G181500--Sobic001G288800 Sobic003G181500--Sobic001G281400 Sobic009G023200 Sobic009G023200 Sobic003G181500--Sobic009G023200 Sobic003G181500--Sobic002G211900 Sobic003G181500--Sobic002G046100 Sobic001G288800--Sobic003G181500 Sobic010G150575 Sobic010G150575 Sobic001G288800--Sobic010G150575 Sobic001G288800--Sobic001G281400 Sobic001G288800--Sobic003G350300 Sobic001G288800--Sobic001G177800 Sobic001G288800--Sobic010G243200 Sobic001G288800--Sobic003G321700 Sobic001G288800--Sobic004G187900 Sobic006G173900 Sobic006G173900 Sobic001G288800--Sobic006G173900 Sobic002G187500--Sobic010G009300 Sobic002G187500--Sobic003G285800 Sobic002G190900 Sobic002G190900 Sobic002G187500--Sobic002G190900 Sobic002G187500--Sobic002G046100 Sobic003G072300 Sobic003G072300 Sobic002G187500--Sobic003G072300 Sobic002G187500--Sobic001G177800 Sobic002G081600 Sobic002G081600 Sobic002G187500--Sobic002G081600 Sobic002G187500--Sobic001G281400 Sobic003G393700 Sobic003G393700 Sobic002G187500--Sobic003G393700
Octagon: transcription factors


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