Gene annotation
Transcriptome id Sobic.006G191600.1
Synonym ATOXS3, Sb06g026470, OXS3
Functional annotation expressed protein
UniProt C5YEJ9
Pfam -
Panther DB PTHR33172 PTHR33172:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56550 : oxidative stress 3
RAP-DB (Rice) LOC_Os04g49370.1 : expressed protein
MaizeGDB (Corn) Zm00025a056685 , Zm00025a010070
Brachypodium KQK00804 , KQJ84200
Barley HORVU2Hr1G093700.3 , HORVU2Hr1G093700.2 , HORVU2Hr1G093700.1 , HORVU0Hr1G027050.1 , HORVU6Hr1G066340.1 , HORVU2Hr1G093730.2 , HORVU2Hr1G093730.1
Wheat TraesCS6D02G241200 , TraesCS2D02G391700 , TraesCS6A02G260400 , TraesCS6B02G287700 , TraesCS2A02G393800 , TraesCS2B02G411800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254200 expressed protein -
2 Sobic.001G225200 expressed protein -
3 Sobic.003G406900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.001G311000 expansin precursor, putative, expressed -
5 Sobic.001G082400 cytochrome P450, putative, expressed -
6 Sobic.003G048000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
7 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
8 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
9 Sobic.003G402300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@P21-Rho-binding domain containing protein, putative, expressed -
10 Sobic.005G103900 - -
11 Sobic.001G223100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
12 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.002G353800 homeobox domain containing protein, expressed K09338: homeobox-leucine zipper protein
14 Sobic.001G225300 - -
15 Sobic.006G241300 expressed protein -
16 Sobic.009G159200 guanylyl cyclase, putative, expressed -
17 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
19 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
20 Sobic.006G124000 BTBZ4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with TAZ zinc finger and Calmodulin-binding domains, expressed -


Gene co-expression network
sample Sobic006G191600 Sobic006G191600 Sobic002G254200 Sobic002G254200 Sobic006G191600--Sobic002G254200 Sobic001G225200 Sobic001G225200 Sobic006G191600--Sobic001G225200 Sobic003G406900 Sobic003G406900 Sobic006G191600--Sobic003G406900 Sobic001G311000 Sobic001G311000 Sobic006G191600--Sobic001G311000 Sobic001G082400 Sobic001G082400 Sobic006G191600--Sobic001G082400 Sobic003G048000 Sobic003G048000 Sobic006G191600--Sobic003G048000 Sobic006G157500 Sobic006G157500 Sobic006G191600--Sobic006G157500 Sobic004G164500 Sobic004G164500 Sobic006G191600--Sobic004G164500 Sobic003G402300 Sobic003G402300 Sobic006G191600--Sobic003G402300 Sobic002G254200--Sobic001G225200 Sobic001G225300 Sobic001G225300 Sobic002G254200--Sobic001G225300 Sobic006G269200 Sobic006G269200 Sobic002G254200--Sobic006G269200 Sobic006G154500 Sobic006G154500 Sobic002G254200--Sobic006G154500 Sobic007G177100 Sobic007G177100 Sobic002G254200--Sobic007G177100 Sobic002G254200--Sobic006G191600 Sobic009G159200 Sobic009G159200 Sobic002G254200--Sobic009G159200 Sobic002G254200--Sobic006G157500 Sobic007G126100 Sobic007G126100 Sobic002G254200--Sobic007G126100 Sobic001G225200--Sobic001G225300 Sobic001G225200--Sobic002G254200 Sobic001G225200--Sobic006G157500 Sobic001G225200--Sobic006G191600 Sobic001G225200--Sobic003G406900 Sobic001G225200--Sobic006G269200 Sobic001G225200--Sobic007G177100 Sobic001G225200--Sobic006G154500 Sobic003G265200 Sobic003G265200 Sobic001G225200--Sobic003G265200 Sobic003G406900--Sobic001G225200 Sobic003G406900--Sobic006G191600 Sobic003G406900--Sobic001G225300 Sobic006G241300 Sobic006G241300 Sobic003G406900--Sobic006G241300 Sobic003G406900--Sobic002G254200 Sobic009G065000 Sobic009G065000 Sobic003G406900--Sobic009G065000 Sobic003G406900--Sobic001G311000 Sobic003G406900--Sobic003G048000 Sobic002G205300 Sobic002G205300 Sobic003G406900--Sobic002G205300 Sobic001G311000--Sobic004G164500 Sobic001G311000--Sobic009G065000 Sobic001G311000--Sobic006G191600 Sobic001G311000--Sobic007G177100 Sobic001G311000--Sobic003G402300 Sobic001G311000--Sobic007G126100 Sobic008G106800 Sobic008G106800 Sobic001G311000--Sobic008G106800 Sobic006G257900 Sobic006G257900 Sobic001G311000--Sobic006G257900 Sobic003G293900 Sobic003G293900 Sobic001G311000--Sobic003G293900 Sobic001G056700 Sobic001G056700 Sobic001G082400--Sobic001G056700 Sobic001G071100 Sobic001G071100 Sobic001G082400--Sobic001G071100 Sobic001G082400--Sobic006G191600 Sobic002G291300 Sobic002G291300 Sobic001G082400--Sobic002G291300 Sobic002G361001 Sobic002G361001 Sobic001G082400--Sobic002G361001 Sobic002G282400 Sobic002G282400 Sobic001G082400--Sobic002G282400 Sobic001G082400--Sobic007G126100 Sobic001G082400--Sobic004G164500 Sobic001G223100 Sobic001G223100 Sobic001G082400--Sobic001G223100 Sobic003G048000--Sobic006G157500 Sobic009G168900 Sobic009G168900 Sobic003G048000--Sobic009G168900 Sobic003G048000--Sobic003G265200 Sobic003G360000 Sobic003G360000 Sobic003G048000--Sobic003G360000 Sobic001G304700 Sobic001G304700 Sobic003G048000--Sobic001G304700 Sobic003G303100 Sobic003G303100 Sobic003G048000--Sobic003G303100 Sobic005G196800 Sobic005G196800 Sobic003G048000--Sobic005G196800 Sobic003G048000--Sobic006G154500 Sobic002G330000 Sobic002G330000 Sobic003G048000--Sobic002G330000 Sobic006G157500--Sobic009G168900 Sobic006G157500--Sobic003G265200 Sobic002G339100 Sobic002G339100 Sobic006G157500--Sobic002G339100 Sobic003G260300 Sobic003G260300 Sobic006G157500--Sobic003G260300 Sobic001G477600 Sobic001G477600 Sobic006G157500--Sobic001G477600 Sobic001G318700 Sobic001G318700 Sobic006G157500--Sobic001G318700 Sobic009G184000 Sobic009G184000 Sobic006G157500--Sobic009G184000 Sobic004G109900 Sobic004G109900 Sobic006G157500--Sobic004G109900 Sobic001G112200 Sobic001G112200 Sobic006G157500--Sobic001G112200 Sobic001G471900 Sobic001G471900 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic010G154150 Sobic010G154150 Sobic004G164500--Sobic010G154150 Sobic004G164500--Sobic006G257900 Sobic010G228600 Sobic010G228600 Sobic004G164500--Sobic010G228600 Sobic004G164500--Sobic007G177100 Sobic003G402300--Sobic006G157500 Sobic003G402300--Sobic007G177100 Sobic003G402300--Sobic004G164500 Sobic002G353800 Sobic002G353800 Sobic003G402300--Sobic002G353800 Sobic003G402300--Sobic002G339100 Sobic003G402300--Sobic001G311000 Sobic003G402300--Sobic009G159200 Sobic007G090463 Sobic007G090463 Sobic003G402300--Sobic007G090463 Sobic001G372100 Sobic001G372100 Sobic003G402300--Sobic001G372100
Octagon: transcription factors


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