Gene annotation
Transcriptome id Sobic.004G164500.1
Synonym Sb04g021610
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed
UniProt C5XTE2
Pfam PF01428 PF01754
Panther DB PTHR10634
NCBI CDD KOG3173; Predicted Zn-finger protein
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT2G36320 : A20/AN1-like zinc finger family protein
RAP-DB (Rice) LOC_Os02g32840.1 : zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a031472
Brachypodium KQJ99713
Barley HORVU7Hr1G050270.3 , HORVU7Hr1G050270.2 , HORVU7Hr1G050270.1 , HORVU7Hr1G050270.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G471900 C2 domain containing protein, putative, expressed -
2 Sobic.001G311000 expansin precursor, putative, expressed -
3 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.008G106800 isoflavone reductase, putative, expressed -
5 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
6 Sobic.010G154150 - -
7 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.010G228600 LSM domain containing protein, expressed -
9 Sobic.007G177100 "Syntelog of ZmMYB42, bind to the COMT1, CSE, 4CL2, F5H, and SbMYB42 promroter region"(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.003G402300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@P21-Rho-binding domain containing protein, putative, expressed -
11 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
12 Sobic.006G241300 expressed protein -
13 Sobic.007G126100 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
14 Sobic.001G082400 cytochrome P450, putative, expressed -
15 Sobic.006G191600 expressed protein -
16 Sobic.001G230700 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
17 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
18 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
19 Sobic.002G278300 thaumatin, putative, expressed -
20 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -


Gene co-expression network
sample Sobic004G164500 Sobic004G164500 Sobic001G471900 Sobic001G471900 Sobic004G164500--Sobic001G471900 Sobic001G311000 Sobic001G311000 Sobic004G164500--Sobic001G311000 Sobic009G065000 Sobic009G065000 Sobic004G164500--Sobic009G065000 Sobic008G106800 Sobic008G106800 Sobic004G164500--Sobic008G106800 Sobic001G056700 Sobic001G056700 Sobic004G164500--Sobic001G056700 Sobic010G154150 Sobic010G154150 Sobic004G164500--Sobic010G154150 Sobic006G257900 Sobic006G257900 Sobic004G164500--Sobic006G257900 Sobic010G228600 Sobic010G228600 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic001G471900--Sobic010G228600 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic003G273100 Sobic003G273100 Sobic001G471900--Sobic003G273100 Sobic001G311000--Sobic004G164500 Sobic001G311000--Sobic009G065000 Sobic006G191600 Sobic006G191600 Sobic001G311000--Sobic006G191600 Sobic001G311000--Sobic007G177100 Sobic003G402300 Sobic003G402300 Sobic001G311000--Sobic003G402300 Sobic007G126100 Sobic007G126100 Sobic001G311000--Sobic007G126100 Sobic001G311000--Sobic008G106800 Sobic001G311000--Sobic006G257900 Sobic003G293900 Sobic003G293900 Sobic001G311000--Sobic003G293900 Sobic009G065000--Sobic004G164500 Sobic009G065000--Sobic001G311000 Sobic001G206000 Sobic001G206000 Sobic009G065000--Sobic001G206000 Sobic009G065000--Sobic008G106800 Sobic009G065000--Sobic006G257900 Sobic009G065000--Sobic001G471900 Sobic009G065000--Sobic007G177100 Sobic009G065000--Sobic010G228600 Sobic003G116700 Sobic003G116700 Sobic009G065000--Sobic003G116700 Sobic008G106800--Sobic004G164500 Sobic008G106800--Sobic001G471900 Sobic008G106800--Sobic001G056700 Sobic008G106800--Sobic009G065000 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic008G106800--Sobic001G311000 Sobic002G278300 Sobic002G278300 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic001G056700--Sobic001G471900 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic001G056700--Sobic002G278300 Sobic010G154150--Sobic006G257900 Sobic010G154150--Sobic004G164500 Sobic010G154150--Sobic001G471900 Sobic010G154150--Sobic010G228600 Sobic009G034400 Sobic009G034400 Sobic010G154150--Sobic009G034400 Sobic010G154150--Sobic001G056700 Sobic010G154150--Sobic008G106800 Sobic010G218100 Sobic010G218100 Sobic010G154150--Sobic010G218100 Sobic009G036900 Sobic009G036900 Sobic010G154150--Sobic009G036900 Sobic010G071200 Sobic010G071200 Sobic006G257900--Sobic010G071200 Sobic001G149700 Sobic001G149700 Sobic006G257900--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic006G257900--Sobic001G478300 Sobic006G257900--Sobic010G154150 Sobic007G063200 Sobic007G063200 Sobic006G257900--Sobic007G063200 Sobic004G231400 Sobic004G231400 Sobic006G257900--Sobic004G231400 Sobic010G055500 Sobic010G055500 Sobic006G257900--Sobic010G055500 Sobic004G188300 Sobic004G188300 Sobic006G257900--Sobic004G188300 Sobic006G257900--Sobic004G164500 Sobic010G228600--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic010G228600--Sobic002G068300 Sobic010G228600--Sobic001G056700 Sobic010G228600--Sobic001G471900 Sobic010G228600--Sobic010G144400 Sobic010G228600--Sobic010G071200 Sobic010G228600--Sobic009G034400 Sobic010G228600--Sobic001G149700 Sobic010G228600--Sobic004G164500 Sobic009G159200 Sobic009G159200 Sobic007G177100--Sobic009G159200 Sobic007G177100--Sobic007G126100 Sobic004G212900 Sobic004G212900 Sobic007G177100--Sobic004G212900 Sobic006G157500 Sobic006G157500 Sobic007G177100--Sobic006G157500 Sobic004G166400 Sobic004G166400 Sobic007G177100--Sobic004G166400 Sobic010G030401 Sobic010G030401 Sobic007G177100--Sobic010G030401 Sobic002G254200 Sobic002G254200 Sobic007G177100--Sobic002G254200 Sobic007G197600 Sobic007G197600 Sobic007G177100--Sobic007G197600 Sobic003G360000 Sobic003G360000 Sobic007G177100--Sobic003G360000
Octagon: transcription factors


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