Gene annotation
Transcriptome id Sobic.008G106800.1,Sobic.008G106800.4,Sobic.008G106800.2,Sobic.008G106800.3
Synonym PRR1, Sb08g016170, ATPRR1
Functional annotation isoflavone reductase, putative, expressed
UniProt A0A1Z5R5Y3 , A0A1Z5R6W7 , A0A1Z5R750 , A0A1Z5R605
Pfam PF01370
Panther DB PTHR10366 PTHR10366:SF397
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT1G32100 : pinoresinol reductase 1
RAP-DB (Rice) LOC_Os12g16410.1 : isoflavone reductase, putative, expressed
MaizeGDB (Corn) Zm00025a025585 , Zm00025a007712
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.008G106800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
2 Sobic.001G471900 C2 domain containing protein, putative, expressed -
3 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
4 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
5 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
6 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
7 Sobic.001G311000 expansin precursor, putative, expressed -
8 Sobic.002G278300 thaumatin, putative, expressed -
9 Sobic.001G230700 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
10 Sobic.010G154150 - -
11 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
12 Sobic.001G253600 expressed protein -
13 Sobic.001G516500 expansin precursor, putative, expressed -
14 Sobic.010G228600 LSM domain containing protein, expressed -
15 Sobic.001G479800 glycosyl transferase, putative, expressed -
16 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
18 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
19 Sobic.007G126200 mitosis protein dim1, putative, expressed K12859: TXNL4A, U5 snRNP protein, DIM1 family
20 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -


Gene co-expression network
sample Sobic008G106800 Sobic008G106800 Sobic004G164500 Sobic004G164500 Sobic008G106800--Sobic004G164500 Sobic001G471900 Sobic001G471900 Sobic008G106800--Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic008G106800--Sobic001G056700 Sobic009G065000 Sobic009G065000 Sobic008G106800--Sobic009G065000 Sobic003G273100 Sobic003G273100 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic001G311000 Sobic001G311000 Sobic008G106800--Sobic001G311000 Sobic002G278300 Sobic002G278300 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic004G164500--Sobic001G471900 Sobic004G164500--Sobic001G311000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic010G154150 Sobic010G154150 Sobic004G164500--Sobic010G154150 Sobic006G257900 Sobic006G257900 Sobic004G164500--Sobic006G257900 Sobic010G228600 Sobic010G228600 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic001G471900--Sobic001G056700 Sobic001G471900--Sobic004G164500 Sobic001G471900--Sobic008G106800 Sobic001G471900--Sobic010G228600 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic001G471900--Sobic003G273100 Sobic001G056700--Sobic001G471900 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic001G056700--Sobic002G278300 Sobic009G065000--Sobic004G164500 Sobic009G065000--Sobic001G311000 Sobic001G206000 Sobic001G206000 Sobic009G065000--Sobic001G206000 Sobic009G065000--Sobic008G106800 Sobic009G065000--Sobic006G257900 Sobic009G065000--Sobic001G471900 Sobic009G065000--Sobic007G177100 Sobic009G065000--Sobic010G228600 Sobic003G116700 Sobic003G116700 Sobic009G065000--Sobic003G116700 Sobic003G273100--Sobic001G371300 Sobic001G149700 Sobic001G149700 Sobic003G273100--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic003G273100--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic003G273100--Sobic004G274700 Sobic003G273100--Sobic002G291300 Sobic001G427800 Sobic001G427800 Sobic003G273100--Sobic001G427800 Sobic004G231400 Sobic004G231400 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic004G079100 Sobic004G079100 Sobic003G273100--Sobic004G079100 Sobic003G137400--Sobic003G273100 Sobic003G137400--Sobic008G106800 Sobic003G137400--Sobic004G231400 Sobic003G137400--Sobic004G274700 Sobic003G137400--Sobic001G149700 Sobic003G137400--Sobic001G478300 Sobic006G088100 Sobic006G088100 Sobic003G137400--Sobic006G088100 Sobic010G209501 Sobic010G209501 Sobic003G137400--Sobic010G209501 Sobic005G012000 Sobic005G012000 Sobic003G137400--Sobic005G012000 Sobic001G311000--Sobic004G164500 Sobic001G311000--Sobic009G065000 Sobic006G191600 Sobic006G191600 Sobic001G311000--Sobic006G191600 Sobic001G311000--Sobic007G177100 Sobic003G402300 Sobic003G402300 Sobic001G311000--Sobic003G402300 Sobic007G126100 Sobic007G126100 Sobic001G311000--Sobic007G126100 Sobic001G311000--Sobic008G106800 Sobic001G311000--Sobic006G257900 Sobic003G293900 Sobic003G293900 Sobic001G311000--Sobic003G293900 Sobic003G436800 Sobic003G436800 Sobic002G278300--Sobic003G436800 Sobic009G055100 Sobic009G055100 Sobic002G278300--Sobic009G055100 Sobic009G040900 Sobic009G040900 Sobic002G278300--Sobic009G040900 Sobic009G159200 Sobic009G159200 Sobic002G278300--Sobic009G159200 Sobic002G278300--Sobic001G056700 Sobic009G166700 Sobic009G166700 Sobic002G278300--Sobic009G166700 Sobic002G278300--Sobic007G177100 Sobic004G069200 Sobic004G069200 Sobic002G278300--Sobic004G069200 Sobic009G075900 Sobic009G075900 Sobic002G278300--Sobic009G075900 Sobic001G230700--Sobic002G291300 Sobic003G296600 Sobic003G296600 Sobic001G230700--Sobic003G296600 Sobic006G184300 Sobic006G184300 Sobic001G230700--Sobic006G184300 Sobic001G230700--Sobic008G106800 Sobic001G230700--Sobic004G164500 Sobic001G230700--Sobic003G293900 Sobic001G516500 Sobic001G516500 Sobic001G230700--Sobic001G516500 Sobic001G230700--Sobic001G311000 Sobic007G150200 Sobic007G150200 Sobic001G230700--Sobic007G150200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.