Gene annotation
Transcriptome id Sobic.001G471900.2,Sobic.001G471900.1
Synonym Sb01g044220
Functional annotation C2 domain containing protein, putative, expressed
UniProt A0A1B6QPW2
Pfam PF00168
Panther DB PTHR31208 PTHR31208:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G50570 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os03g09840.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a001237 , Zm00025a053187
Brachypodium KQK23161
Barley HORVU4Hr1G071470.3 , HORVU4Hr1G071470.2 , HORVU4Hr1G071470.1 , HORVU4Hr1G071470.5 , HORVU4Hr1G071470.4
Wheat TraesCS4D02G265600
Populus -


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cDNA sequences
Sobic.001G471900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G056700 "O2(rtholog in meize:Hartings et al., 1989)"(PubMedID : 31659831)@bZIP transcription factor domain containing protein, expressed -
2 Sobic.004G164500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
3 Sobic.008G106800 isoflavone reductase, putative, expressed -
4 Sobic.010G228600 LSM domain containing protein, expressed -
5 Sobic.010G154150 - -
6 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
7 Sobic.006G257900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.010G144400 glycosyltransferase, putative, expressed -
9 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
10 Sobic.009G065000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA15 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
11 Sobic.002G278300 thaumatin, putative, expressed -
12 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.001G253600 expressed protein -
14 Sobic.001G311000 expansin precursor, putative, expressed -
15 Sobic.001G516500 expansin precursor, putative, expressed -
16 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
17 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
18 Sobic.002G017300 expressed protein -
19 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
20 Sobic.009G166700 expressed protein -


Gene co-expression network
sample Sobic001G471900 Sobic001G471900 Sobic001G056700 Sobic001G056700 Sobic001G471900--Sobic001G056700 Sobic004G164500 Sobic004G164500 Sobic001G471900--Sobic004G164500 Sobic008G106800 Sobic008G106800 Sobic001G471900--Sobic008G106800 Sobic010G228600 Sobic010G228600 Sobic001G471900--Sobic010G228600 Sobic010G154150 Sobic010G154150 Sobic001G471900--Sobic010G154150 Sobic002G291300 Sobic002G291300 Sobic001G471900--Sobic002G291300 Sobic006G257900 Sobic006G257900 Sobic001G471900--Sobic006G257900 Sobic010G144400 Sobic010G144400 Sobic001G471900--Sobic010G144400 Sobic003G273100 Sobic003G273100 Sobic001G471900--Sobic003G273100 Sobic001G056700--Sobic001G471900 Sobic001G056700--Sobic002G291300 Sobic001G056700--Sobic010G228600 Sobic001G056700--Sobic010G144400 Sobic001G056700--Sobic004G164500 Sobic001G082400 Sobic001G082400 Sobic001G056700--Sobic001G082400 Sobic001G371300 Sobic001G371300 Sobic001G056700--Sobic001G371300 Sobic001G056700--Sobic003G273100 Sobic002G278300 Sobic002G278300 Sobic001G056700--Sobic002G278300 Sobic004G164500--Sobic001G471900 Sobic001G311000 Sobic001G311000 Sobic004G164500--Sobic001G311000 Sobic009G065000 Sobic009G065000 Sobic004G164500--Sobic009G065000 Sobic004G164500--Sobic008G106800 Sobic004G164500--Sobic001G056700 Sobic004G164500--Sobic010G154150 Sobic004G164500--Sobic006G257900 Sobic004G164500--Sobic010G228600 Sobic007G177100 Sobic007G177100 Sobic004G164500--Sobic007G177100 Sobic008G106800--Sobic004G164500 Sobic008G106800--Sobic001G471900 Sobic008G106800--Sobic001G056700 Sobic008G106800--Sobic009G065000 Sobic008G106800--Sobic003G273100 Sobic003G137400 Sobic003G137400 Sobic008G106800--Sobic003G137400 Sobic008G106800--Sobic001G311000 Sobic008G106800--Sobic002G278300 Sobic001G230700 Sobic001G230700 Sobic008G106800--Sobic001G230700 Sobic009G036900 Sobic009G036900 Sobic010G228600--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic010G228600--Sobic002G068300 Sobic010G228600--Sobic001G056700 Sobic010G228600--Sobic001G471900 Sobic010G228600--Sobic010G144400 Sobic010G071200 Sobic010G071200 Sobic010G228600--Sobic010G071200 Sobic009G034400 Sobic009G034400 Sobic010G228600--Sobic009G034400 Sobic001G149700 Sobic001G149700 Sobic010G228600--Sobic001G149700 Sobic010G228600--Sobic004G164500 Sobic010G154150--Sobic006G257900 Sobic010G154150--Sobic004G164500 Sobic010G154150--Sobic001G471900 Sobic010G154150--Sobic010G228600 Sobic010G154150--Sobic009G034400 Sobic010G154150--Sobic001G056700 Sobic010G154150--Sobic008G106800 Sobic010G218100 Sobic010G218100 Sobic010G154150--Sobic010G218100 Sobic010G154150--Sobic009G036900 Sobic002G291300--Sobic001G371300 Sobic002G291300--Sobic001G056700 Sobic002G291300--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic002G291300--Sobic001G427800 Sobic002G291300--Sobic001G230700 Sobic002G291300--Sobic001G471900 Sobic007G126100 Sobic007G126100 Sobic002G291300--Sobic007G126100 Sobic001G478300 Sobic001G478300 Sobic002G291300--Sobic001G478300 Sobic002G291300--Sobic004G164500 Sobic006G257900--Sobic010G071200 Sobic006G257900--Sobic001G149700 Sobic006G257900--Sobic001G478300 Sobic006G257900--Sobic010G154150 Sobic007G063200 Sobic007G063200 Sobic006G257900--Sobic007G063200 Sobic004G231400 Sobic004G231400 Sobic006G257900--Sobic004G231400 Sobic010G055500 Sobic010G055500 Sobic006G257900--Sobic010G055500 Sobic004G188300 Sobic004G188300 Sobic006G257900--Sobic004G188300 Sobic006G257900--Sobic004G164500 Sobic010G144400--Sobic002G068300 Sobic010G144400--Sobic001G056700 Sobic010G144400--Sobic010G228600 Sobic004G172700 Sobic004G172700 Sobic010G144400--Sobic004G172700 Sobic001G090000 Sobic001G090000 Sobic010G144400--Sobic001G090000 Sobic009G016201 Sobic009G016201 Sobic010G144400--Sobic009G016201 Sobic002G258100 Sobic002G258100 Sobic010G144400--Sobic002G258100 Sobic010G144400--Sobic001G471900 Sobic001G253600 Sobic001G253600 Sobic010G144400--Sobic001G253600 Sobic003G273100--Sobic001G371300 Sobic003G273100--Sobic001G149700 Sobic003G273100--Sobic001G478300 Sobic004G274700 Sobic004G274700 Sobic003G273100--Sobic004G274700 Sobic003G273100--Sobic002G291300 Sobic003G273100--Sobic001G427800 Sobic003G273100--Sobic004G231400 Sobic007G126200 Sobic007G126200 Sobic003G273100--Sobic007G126200 Sobic004G079100 Sobic004G079100 Sobic003G273100--Sobic004G079100
Octagon: transcription factors


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